Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0491
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    26   1.2  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   4.7  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   6.2  
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    23   8.2  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -1

Query: 399 MSLCYWISFRRNLCPSFFF-RVYGLV 325
           M++CYW+  +  L  +FF   +Y LV
Sbjct: 617 MAICYWMKQKYQLIAAFFISAIYSLV 642


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = -2

Query: 377 RLDAISARLFFFEFMAWYLGPLGQLPVFMGGCWVV 273
           R+D  S R   F+   WY+  +  L      CW V
Sbjct: 378 RMDTTSGRSGLFKGGGWYMLGVQSLSALCLACWGV 412


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 528 LVKRSLVNGPLMRSG*ERKKKQSNIM 605
           L KRSL+N P  R+  ER   +S+ +
Sbjct: 286 LAKRSLMNNPSKRAIMERSNSRSSCL 311


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 119 KXKKN*WPHTRAVRRHTHGHP 181
           K K+N WP  R V  +   HP
Sbjct: 190 KVKRNCWPKVRGVAMNPVEHP 210


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,099
Number of Sequences: 2352
Number of extensions: 12217
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)