Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0490
(556 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 133 3e-30
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 126 5e-28
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 102 5e-21
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 102 6e-21
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 90 4e-17
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 85 1e-15
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 84 2e-15
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 79 9e-14
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 77 3e-13
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 73 6e-12
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 71 2e-11
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 63 5e-09
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 54 2e-06
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 53 5e-06
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 43 0.004
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 41 0.017
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 41 0.017
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 40 0.029
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 38 0.21
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 38 0.21
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 36 0.84
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 35 1.1
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 35 1.5
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 35 1.5
UniRef50_Q9Y4G2 Cluster: Pleckstrin homology domain-containing f... 34 1.9
UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FA... 34 1.9
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 34 1.9
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 33 4.5
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 133 bits (321), Expect = 3e-30
Identities = 58/77 (75%), Positives = 72/77 (93%)
Frame = +2
Query: 23 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 202
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 203 VXIRVTVKGGGHVAQVY 253
V IRV VKGGGHVAQ+Y
Sbjct: 66 VDIRVRVKGGGHVAQIY 82
Score = 123 bits (297), Expect = 2e-27
Identities = 56/63 (88%), Positives = 61/63 (96%)
Frame = +1
Query: 256 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARXRYQK 435
IRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGAR RYQK
Sbjct: 84 IRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQK 143
Query: 436 SYR 444
SYR
Sbjct: 144 SYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 126 bits (303), Expect = 5e-28
Identities = 58/81 (71%), Positives = 71/81 (87%)
Frame = +2
Query: 11 ARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKE 190
A +E IQ+VQV GRKKTATAVAYCKRG+G+L+VNGRPL+ +EP L+YKL EPILLLGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 191 KFSMVXIRVTVKGGGHVAQVY 253
+F+ V IR+ VKGGG+VAQ+Y
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIY 84
Score = 124 bits (298), Expect = 2e-27
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = +1
Query: 256 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARXRYQK 435
IRQAISKAL+A+YQKYVDE SKKEIKD L+QYDR+LLVADPRRCEPKKFGGPGAR RYQK
Sbjct: 86 IRQAISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQK 145
Query: 436 SYR 444
SYR
Sbjct: 146 SYR 148
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 102 bits (245), Expect = 5e-21
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +1
Query: 256 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARXRYQK 435
IRQAI+K+L+A+YQKYVDE SK ++K VQYDR+LLVAD RR EPKKFGG GAR RYQK
Sbjct: 93 IRQAIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQK 152
Query: 436 SYR 444
SYR
Sbjct: 153 SYR 155
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +2
Query: 164 EPILLLGKEKFSMVXIRVTVKGGGHVAQVY 253
EP+L++G +KF+ V IRV V GGGH +QVY
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVY 91
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 102 bits (244), Expect = 6e-21
Identities = 44/76 (57%), Positives = 62/76 (81%)
Frame = +2
Query: 26 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 205
+ +VQ FG+KK+ATAVA+ K G G+++VNG P+ LVEP +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 206 XIRVTVKGGGHVAQVY 253
IRV V GGGHV+QVY
Sbjct: 64 DIRVRVTGGGHVSQVY 79
Score = 95.5 bits (227), Expect = 7e-19
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = +1
Query: 256 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARXRYQK 435
IRQAI+K L+A++QKYVDE SK E+K YDR+LL+AD RR EPKKFGG GAR R+QK
Sbjct: 81 IRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQK 140
Query: 436 SYR 444
SYR
Sbjct: 141 SYR 143
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 89.8 bits (213), Expect = 4e-17
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = +1
Query: 256 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARXRYQK 435
IRQAI+K+L+A+Y KY D AS E++ + V YDR+LL+AD RR EPKKFGG GAR R QK
Sbjct: 137 IRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIADTRRSEPKKFGGHGARARRQK 196
Query: 436 SYR 444
SYR
Sbjct: 197 SYR 199
Score = 79.4 bits (187), Expect = 5e-14
Identities = 31/56 (55%), Positives = 49/56 (87%)
Frame = +2
Query: 32 AVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFS 199
+V FG+KKTATAVA+CK G G++R+NG+P+ LV+P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 85.0 bits (201), Expect = 1e-15
Identities = 39/63 (61%), Positives = 48/63 (76%)
Frame = +1
Query: 256 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARXRYQK 435
+R A +KA++AFY Y DE K+EI+ L+ +DR LVAD R+ EPKKFGGPGAR RYQK
Sbjct: 83 VRMAFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSRKREPKKFGGPGARARYQK 142
Query: 436 SYR 444
SYR
Sbjct: 143 SYR 145
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 84.2 bits (199), Expect = 2e-15
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = +1
Query: 259 RQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARXRYQKS 438
RQAI+K LIAF+QKY +E K +KD + YD+ LL+ADPRRCEPKK+G AR R+ KS
Sbjct: 88 RQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLLIADPRRCEPKKWGRHSARTRFTKS 147
Query: 439 YR 444
YR
Sbjct: 148 YR 149
Score = 62.9 bits (146), Expect = 5e-09
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +2
Query: 26 IQAVQVFGRKKTATAVA-YCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 202
++ VQ FG+KKTA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 203 VXIRVTVKGGGHVAQVYVS 259
+ I V V GGG V+Q Y +
Sbjct: 69 LRIDVAVHGGGQVSQAYAA 87
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 78.6 bits (185), Expect = 9e-14
Identities = 48/145 (33%), Positives = 67/145 (46%)
Frame = +2
Query: 26 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 205
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 206 XIRVTVKGGGHVAQVYVSDKLFQRL*SPSTRNM*TKPQRRKSKTS*YNTIGVCWWLTXXX 385
I V VKG GHV Q+Y + + P + T CWW T
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWFTPVA 133
Query: 386 XXXXXXXXXXXXXDTRNLTVKPSRK 460
TRN + KP +K
Sbjct: 134 MNPRNLQALVPVLTTRNHSSKPIKK 158
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 77.0 bits (181), Expect = 3e-13
Identities = 36/90 (40%), Positives = 52/90 (57%)
Frame = +2
Query: 8 EARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGK 187
E R V G+KK + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+
Sbjct: 16 EVRERDKYTVHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGE 75
Query: 188 EKFSMVXIRVTVKGGGHVAQVYVSDKLFQR 277
F + + + V GGGHV+Q+Y + R
Sbjct: 76 SLFKGLDMNIKVAGGGHVSQIYAVRQAISR 105
Score = 76.6 bits (180), Expect = 4e-13
Identities = 37/63 (58%), Positives = 48/63 (76%)
Frame = +1
Query: 256 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARXRYQK 435
+RQAIS+ ++A + DEA++ E++ LV YDR L+V+DPRRCE KKFGG GAR R QK
Sbjct: 99 VRQAISRGVLASVK---DEAARSELRAKLVSYDRQLVVSDPRRCEAKKFGGRGARARRQK 155
Query: 436 SYR 444
SYR
Sbjct: 156 SYR 158
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 72.5 bits (170), Expect = 6e-12
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = +1
Query: 256 IRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARXRYQK 435
IRQ+ISK L+ +Y KY+ + +K + YD+ LL++D R EPKK+GG GAR R+QK
Sbjct: 77 IRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEPKKYGGLGARARFQK 136
Query: 436 SYR 444
SYR
Sbjct: 137 SYR 139
Score = 66.1 bits (154), Expect = 5e-10
Identities = 28/73 (38%), Positives = 46/73 (63%)
Frame = +2
Query: 35 VQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIR 214
+Q FG+KK A A+ K+G G +++NG P++LV P ++ K+ EP +LG + +
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 215 VTVKGGGHVAQVY 253
+ KGGG V+Q+Y
Sbjct: 63 IFSKGGGKVSQIY 75
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 70.5 bits (165), Expect = 2e-11
Identities = 28/74 (37%), Positives = 52/74 (70%)
Frame = +2
Query: 26 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 205
++ +Q G++KTA A A + G G +R+NG+P++++EP + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 206 XIRVTVKGGGHVAQ 247
I V V+GGG + Q
Sbjct: 61 DIDVKVQGGGFMGQ 74
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 277 ALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK--FGGPGARXRYQKSYR 444
A IA + V+ +K+ ++YDR++LV DPRR EP K G R + QKSYR
Sbjct: 78 ARIAIARALVEWTGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 62.9 bits (146), Expect = 5e-09
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +2
Query: 23 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNG-RPLDLVEPRLLQYKLQEPILLLGKEKFS 199
P+Q+ QVFG KK A +A +G +++V L++ EP QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 200 MVXIRVTVKGGGHVAQVY 253
V I V V G G VAQ+Y
Sbjct: 83 RVGIWVRVNGVGRVAQIY 100
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/67 (38%), Positives = 42/67 (62%)
Frame = +2
Query: 47 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTVK 226
G++K A A A + G G + +NG PL++ + + K+ EP+L+ G+ S+V IRV V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 227 GGGHVAQ 247
GGG + Q
Sbjct: 71 GGGVMGQ 77
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 9/72 (12%)
Frame = +1
Query: 256 IRQAISKALIAFYQ---------KYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGG 408
+R AI++ L+ F++ + +D+ S+ +++ +++DR++LV DPRR EP+K+
Sbjct: 81 VRMAIARGLVEFFRCEESDDELCRMMDKISR-DLRTAFLEHDRTMLVGDPRRTEPEKYMR 139
Query: 409 PGARXRYQKSYR 444
AR R+QKSYR
Sbjct: 140 YSARRRWQKSYR 151
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 52.8 bits (121), Expect = 5e-06
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +1
Query: 310 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARXRYQKSYR 444
+ ++++++ + +D+ L+ D RR EPKKFGGPGAR R QKSYR
Sbjct: 105 KTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGARRRKQKSYR 149
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +2
Query: 17 REPIQAVQVFGRKKTATAVAYCKRGHGMLRV 109
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 43.2 bits (97), Expect = 0.004
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +2
Query: 47 GRKKTATAVAYCKRGHGMLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSMVXIRVT 220
G++K A A + K G G + VNG+PLD L L+ +++ P++L+ +E I V
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 221 VKGGGHVAQ 247
V GGG AQ
Sbjct: 69 VLGGGFAAQ 77
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 41.1 bits (92), Expect = 0.017
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 47 GRKKTATAVAYCKRGHGMLRVNGRP-LDLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 223
GR+KT+ A G G + VNG P L+ L L++P++ G EK I VTV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEK--DFDITVTV 68
Query: 224 KGGGHVAQ 247
KGGG Q
Sbjct: 69 KGGGFTGQ 76
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 41.1 bits (92), Expect = 0.017
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 47 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVXIRVTV 223
GR+KT+TA + +G G + VNG+PLD R + +++P+ LL + I TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 224 KGGG 235
KGGG
Sbjct: 66 KGGG 69
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 40.3 bits (90), Expect = 0.029
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 35 VQVFGRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILL-LGKEKFSMVX 208
+ GR+KTA A Y K G G+++VN P + LL K+ +P+LL + KF
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKFDFY- 66
Query: 209 IRVTVKGGG 235
+ V GGG
Sbjct: 67 --IKVSGGG 73
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 37.5 bits (83), Expect = 0.21
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 47 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 223
GR+KTA A K G G L +NG+ L D + + ++ P L E F V + V V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAP--LKATETFGKVDVWVRV 138
Query: 224 KGGGHVAQ 247
GGG Q
Sbjct: 139 TGGGTTGQ 146
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 37.5 bits (83), Expect = 0.21
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 47 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSMVXIRVTV 223
GR+KT++A + + G G + +NG PLD R + +++P++ L + S + TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 224 KGGGHVAQ 247
+GGG Q
Sbjct: 71 QGGGDSGQ 78
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 35.5 bits (78), Expect = 0.84
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +2
Query: 47 GRKKTATAVAYCKRGHGMLRVNG-RPLDLVEPR-LLQYKLQEPILLLG-KEKFSMVXIRV 217
GR+KT+ A G+G +NG ++ ++ + L + +QEP+ L K +F+++ +
Sbjct: 20 GRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEFNLI---I 76
Query: 218 TVKGGGHVAQV 250
VKGGG V QV
Sbjct: 77 KVKGGGLVGQV 87
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 35.1 bits (77), Expect = 1.1
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 47 GRKKTATAVAYCKRGHGMLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 223
GR+K A G G + NGR L D +L Q ++ P++LLG+E I +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 224 KGGGHVAQ 247
GGG Q
Sbjct: 120 GGGGPTGQ 127
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 34.7 bits (76), Expect = 1.5
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 47 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 223
GR+K + A + K+G G + VNGR +D + ++ P ++ + + +R +V
Sbjct: 29 GRRKKSIAKIWVKKGTGKIYVNGRTMDEYFTSGSHKMQITRPFEIINQA--TDYDVRCSV 86
Query: 224 KGGGHVAQ 247
GGGH Q
Sbjct: 87 AGGGHTGQ 94
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 34.7 bits (76), Expect = 1.5
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2
Query: 47 GRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVXIRVTVK 226
G++KT++AV + G G + VNG+ L PR L + L + + TV+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPR-LHDRESATWALRCTSRLDKYNVWATVR 253
Query: 227 GGGHVAQ 247
GGG Q
Sbjct: 254 GGGVTGQ 260
>UniRef50_Q9Y4G2 Cluster: Pleckstrin homology domain-containing family
M member 1; n=30; Eutheria|Rep: Pleckstrin homology
domain-containing family M member 1 - Homo sapiens
(Human)
Length = 1058
Score = 34.3 bits (75), Expect = 1.9
Identities = 23/56 (41%), Positives = 28/56 (50%)
Frame = -1
Query: 310 RLHISGRRRSEPLK*LV*YVNLCYMTTTLDCXSDXNHREFFLAEQKDRFLKFVLQQ 143
R+H+ GRRR E LK L Y+ LC + NHR + L E RF LQQ
Sbjct: 916 RMHLIGRRR-EQLKLLGDYLGLCRSGALKELSKRLNHRNYLL-ESPHRFSVADLQQ 969
>UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FAS1;
n=3; Aspergillus|Rep: Enoyl reductase domain of
yeast-type FAS1 - Aspergillus oryzae
Length = 2063
Score = 34.3 bits (75), Expect = 1.9
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 11 ARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYK-LQEPILL 178
ARR P+ + VF R ++ V K G G+ + G LD +P L K L P+LL
Sbjct: 505 ARRPPVSHIIVFDRGGLSSLVKKLKEGQGVRVIQGSDLDSRDPELGTMKDLFSPLLL 561
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 34.3 bits (75), Expect = 1.9
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 17 REPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQ-YKLQEPILLLGKEK 193
+ IQ GR+K A + + G+G + VNG+ L+ P +Q + P+ +LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLGDVN 62
Query: 194 FSMVXIRVTVKGGGHVAQV 250
+ IRV+ GGG QV
Sbjct: 63 SFDLIIRVS--GGGVQGQV 79
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 33.1 bits (72), Expect = 4.5
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 47 GRKKTATAVAYCKRGHGMLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSMVXIRVTV 223
GR+K + A G G + +NGR LD L+ +++P++ G E +RV V
Sbjct: 10 GRRKHSVARVRLVPGDGNIVINGRSLDEYFGLETLKLIVKQPLVETGTE--GQYDVRVNV 67
Query: 224 KGGGHVAQ 247
GGG Q
Sbjct: 68 DGGGFTGQ 75
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,745,828
Number of Sequences: 1657284
Number of extensions: 10151772
Number of successful extensions: 25856
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 25206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25851
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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