Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0489
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    26   0.23 
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    26   0.23 
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      26   0.23 
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      26   0.23 
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    25   0.53 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.53 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   3.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.7  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 217 GARAWADIIHFLGISPGRKGL-HRAPCCSG 131
           G  A A  +H+L +SP  KGL HRA   SG
Sbjct: 185 GESAGAAAVHYLVLSPLAKGLFHRAIAQSG 214


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 217 GARAWADIIHFLGISPGRKGL-HRAPCCSG 131
           G  A A  +H+L +SP  KGL HRA   SG
Sbjct: 187 GESAGAAAVHYLVLSPLAKGLFHRAIAQSG 216


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 217 GARAWADIIHFLGISPGRKGL-HRAPCCSG 131
           G  A A  +H+L +SP  KGL HRA   SG
Sbjct: 185 GESAGAAAVHYLVLSPLAKGLFHRAIAQSG 214


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 217 GARAWADIIHFLGISPGRKGL-HRAPCCSG 131
           G  A A  +H+L +SP  KGL HRA   SG
Sbjct: 187 GESAGAAAVHYLVLSPLAKGLFHRAIAQSG 216


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 106 FHVIWWYFTLNNKALYG 156
           FH +W  FT  N  LYG
Sbjct: 204 FHAMWAGFTAENSPLYG 220


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 216 PVCFLFFNPCVSPPMSNVGLFEC 284
           P C    N C+S P SN G  +C
Sbjct: 293 PRCEGDINECLSNPCSNAGTLDC 315


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 480 MSVGPPTPVAGALMMRIFVGVRNNSVNFKCLA 385
           +S+GPP  +   L    F+ V +  + FK L+
Sbjct: 558 LSIGPPLVIPFLLFGGFFLNVSSIPIYFKWLS 589


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 480 MSVGPPTPVAGALMMRIFVGVRNNSVNFKCLA 385
           +S+GPP  +   L    F+ V +  + FK L+
Sbjct: 558 LSIGPPLVIPFLLFGGFFLNVSSIPIYFKWLS 589


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 370 YIRPLR*AFKINTIISHPHKDSHH 441
           Y +PL  A  +N + S+  + SHH
Sbjct: 776 YTKPLVDAQTMNLLRSYHQQQSHH 799


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,625
Number of Sequences: 336
Number of extensions: 4092
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)