Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0488
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 114 4e-26
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 114 4e-26
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 114 4e-26
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 94 8e-20
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 94 8e-20
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 66 2e-11
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 65 3e-11
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 64 8e-11
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 64 8e-11
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 64 8e-11
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 64 1e-10
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 63 1e-10
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 63 1e-10
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 63 1e-10
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 62 2e-10
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 61 7e-10
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 60 2e-09
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 59 2e-09
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 59 2e-09
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 58 5e-09
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 58 5e-09
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 58 5e-09
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 58 7e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 58 7e-09
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 56 2e-08
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 55 4e-08
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 55 4e-08
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 54 8e-08
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 50 1e-06
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 50 2e-06
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 50 2e-06
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 50 2e-06
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 44 1e-04
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 42 3e-04
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 42 3e-04
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 42 3e-04
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 38 0.004
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 38 0.004
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 38 0.004
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 38 0.004
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 34 0.093
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 34 0.093
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 33 0.12
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 33 0.12
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 33 0.21
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 31 0.86
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 31 0.86
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 29 2.6
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 29 2.6
AF024499-2|AAT48621.1| 576|Caenorhabditis elegans Hypothetical ... 27 8.1
AF024499-1|AAT48620.1| 941|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 114 bits (275), Expect = 4e-26
Identities = 56/82 (68%), Positives = 61/82 (74%)
Frame = +3
Query: 9 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
FTVS +HGDMDQ ER+ IMR+FR+GSSRVLITTD+LARGIDVQQVS VINYDLPSNRENY
Sbjct: 293 FTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENY 352
Query: 189 XXXXXXXXXXXXXXXXXNFVTE 254
NFVTE
Sbjct: 353 IHRIGRSGRFGRKGVAINFVTE 374
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 114 bits (275), Expect = 4e-26
Identities = 56/82 (68%), Positives = 61/82 (74%)
Frame = +3
Query: 9 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
FTVS +HGDMDQ ER+ IMR+FR+GSSRVLITTD+LARGIDVQQVS VINYDLPSNRENY
Sbjct: 6 FTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENY 65
Query: 189 XXXXXXXXXXXXXXXXXNFVTE 254
NFVTE
Sbjct: 66 IHRIGRSGRFGRKGVAINFVTE 87
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 114 bits (275), Expect = 4e-26
Identities = 56/82 (68%), Positives = 61/82 (74%)
Frame = +3
Query: 9 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
FTVS +HGDMDQ ER+ IMR+FR+GSSRVLITTD+LARGIDVQQVS VINYDLPSNRENY
Sbjct: 293 FTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENY 352
Query: 189 XXXXXXXXXXXXXXXXXNFVTE 254
NFVTE
Sbjct: 353 IHRIGRSGRFGRKGVAINFVTE 374
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 93.9 bits (223), Expect = 8e-20
Identities = 40/61 (65%), Positives = 55/61 (90%)
Frame = +3
Query: 6 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNREN 185
+FTVS+MHGDM+Q++R+ +M++FR G++RVLI+TD+ ARG+DV QVS VINYDLP+NRE
Sbjct: 289 NFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNREL 348
Query: 186 Y 188
Y
Sbjct: 349 Y 349
Score = 33.9 bits (74), Expect = 0.093
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 257 DRRALKDIEDFYHTSIVEMPSDVANLI 337
D R L+DIE +Y T I EMP ++A++I
Sbjct: 373 DVRILRDIEQYYSTQIDEMPMNIADII 399
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 93.9 bits (223), Expect = 8e-20
Identities = 40/61 (65%), Positives = 55/61 (90%)
Frame = +3
Query: 6 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNREN 185
+FTVS+MHGDM+Q++R+ +M++FR G++RVLI+TD+ ARG+DV QVS VINYDLP+NRE
Sbjct: 289 NFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNREL 348
Query: 186 Y 188
Y
Sbjct: 349 Y 349
Score = 33.9 bits (74), Expect = 0.093
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 257 DRRALKDIEDFYHTSIVEMPSDVANLI 337
D R L+DIE +Y T I EMP ++A++I
Sbjct: 373 DVRILRDIEQYYSTQIDEMPMNIADII 399
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/58 (48%), Positives = 45/58 (77%)
Frame = +3
Query: 15 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
VS HG+M+ ERE +++ F + ++RVL+TTDL+ARG+++++ S +INYD+ N ENY
Sbjct: 254 VSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMNIRK-SLIINYDVSGNMENY 310
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 65.3 bits (152), Expect = 3e-11
Identities = 24/55 (43%), Positives = 41/55 (74%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
+HGD +Q ER+ ++++F+ G + +++ TD+ ARG+DV + VINYD P+N E+Y
Sbjct: 406 IHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDY 460
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 64.1 bits (149), Expect = 8e-11
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXX 203
+HG +QRER +RQFR GS VLI T + RG+D++ V VINYD+P N ++Y
Sbjct: 847 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 906
Query: 204 XXXXXXXXXXXXNFVTE---LTGEH*RILRTSTTLV 302
+F++E L E R+L + LV
Sbjct: 907 RTGRVGNAGRATSFISEDCNLLSELVRVLSDADQLV 942
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 64.1 bits (149), Expect = 8e-11
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXX 203
+HG +QRER +RQFR GS VLI T + RG+D++ V VINYD+P N ++Y
Sbjct: 847 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 906
Query: 204 XXXXXXXXXXXXNFVTE---LTGEH*RILRTSTTLV 302
+F++E L E R+L + LV
Sbjct: 907 RTGRVGNAGRATSFISEDCNLLSELVRVLSDADQLV 942
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 64.1 bits (149), Expect = 8e-11
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXX 203
+HG +QRER +RQFR GS VLI T + RG+D++ V VINYD+P N ++Y
Sbjct: 847 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 906
Query: 204 XXXXXXXXXXXXNFVTE---LTGEH*RILRTSTTLV 302
+F++E L E R+L + LV
Sbjct: 907 RTGRVGNAGRATSFISEDCNLLSELVRVLSDADQLV 942
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/62 (45%), Positives = 43/62 (69%)
Frame = +3
Query: 3 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRE 182
+++ V +HGD+ Q ERE + FRTG++ +L+ T + ARG+D+ V VINYDLPS+ +
Sbjct: 450 QNYEVVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVD 509
Query: 183 NY 188
Y
Sbjct: 510 EY 511
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
+HG +QRER +RQFR GS VLI T + RG+D++ V VINYD+P N ++Y
Sbjct: 636 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 690
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
+HG +QRER +RQFR GS VLI T + RG+D++ V VINYD+P N ++Y
Sbjct: 636 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 690
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
+HG +QRER +RQFR GS VLI T + RG+D++ V VINYD+P N ++Y
Sbjct: 636 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDY 690
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = +3
Query: 3 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 170
R V +HGDM ER + F+ G +VLITT++ ARGIDV QVS VINYDLP
Sbjct: 478 RGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLP 533
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = +3
Query: 3 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 170
R V +HGDM ER + F+ G +VLITT++ ARGIDV QVS VINYDLP
Sbjct: 503 RGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLP 558
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = +3
Query: 3 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 170
R V +HGDM ER + F+ G +VLITT++ ARGIDV QVS VINYDLP
Sbjct: 887 RGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLP 942
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 60.9 bits (141), Expect = 7e-10
Identities = 24/59 (40%), Positives = 42/59 (71%)
Frame = +3
Query: 12 TVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
+V+ +HG +DQ +R+ + F+TG +VL+ T + ARG+DV+ + V+NYD P++ E+Y
Sbjct: 578 SVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDY 636
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
+H M Q R + FR G+ R L+ +DLL RGID+Q V+ VIN+D P N E Y
Sbjct: 310 IHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETY 364
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/55 (43%), Positives = 40/55 (72%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
+HG +Q+ER ++ FR+G+ VLI T ++ RG+D++ V VINYD+P+N ++Y
Sbjct: 593 IHGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDY 647
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/55 (43%), Positives = 40/55 (72%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
+HG +Q+ER ++ FR+G+ VLI T ++ RG+D++ V VINYD+P+N ++Y
Sbjct: 593 IHGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDY 647
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +3
Query: 21 AMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
++HGD+ Q ERE + FR+G +L+ T + ARG+D+ V VINYDLP + + Y
Sbjct: 427 SIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEY 482
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +3
Query: 21 AMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
++HGD+ Q ERE + FR+G +L+ T + ARG+D+ V VINYDLP + + Y
Sbjct: 411 SIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEY 466
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +3
Query: 21 AMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
++HGD+ Q ERE + FR+G +L+ T + ARG+D+ V VINYDLP + + Y
Sbjct: 408 SIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEY 463
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 57.6 bits (133), Expect = 7e-09
Identities = 24/60 (40%), Positives = 39/60 (65%)
Frame = +3
Query: 9 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
F + +HG Q +RE ++ + G+S +L+ TD+ RGIDV+ VS V+NYD+ + E+Y
Sbjct: 598 FKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDY 657
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 57.6 bits (133), Expect = 7e-09
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
+HG Q +RE+ + R+G ++L+ TDL +RGIDV ++ V+NYD P + E Y
Sbjct: 368 LHGGRSQSDREMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEY 422
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 56.4 bits (130), Expect = 2e-08
Identities = 22/55 (40%), Positives = 37/55 (67%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
+HG M Q +R + +F++ + +L+ TD+ ARG+D+ V VINYD+PS ++Y
Sbjct: 313 LHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDY 367
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 170
+HGD Q RE ++ F++ +L+TTDLL+RGIDV + VIN+DLP
Sbjct: 676 LHGDRSQDMREKLINDFKSNRVNLLVTTDLLSRGIDVSDLDRVINFDLP 724
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +3
Query: 15 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
V+++HG DQ +R + FR VL+ TD+ ++G+D Q + VIN+D+P + ENY
Sbjct: 468 VASIHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENY 525
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +3
Query: 3 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRE 182
++F A+H M Q ER + F+ R+L+ TDL RG+D+++V+ V NYD+P + +
Sbjct: 306 QNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSD 365
Query: 183 NY 188
+Y
Sbjct: 366 SY 367
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +3
Query: 3 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRE 182
++F A+H M Q ER + F+ R+L+ TDL RG+D+++V+ V NYD+P + +
Sbjct: 298 QNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSD 357
Query: 183 NY 188
+Y
Sbjct: 358 SY 359
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 54.4 bits (125), Expect = 6e-08
Identities = 23/55 (41%), Positives = 38/55 (69%)
Frame = +3
Query: 3 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 167
+DF + +HGDM Q ER + +FR S++L+ TD+ ARG+D+ ++ VIN+D+
Sbjct: 534 KDFDIVLLHGDMLQAERNENLLKFRK-KSQILVATDVAARGLDISEIRTVINFDM 587
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 54.0 bits (124), Expect = 8e-08
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +3
Query: 15 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
V +++ +ER+ M +FR G VL+ T+LL RG+D+ V VINYDLP++ +Y
Sbjct: 402 VDSINSGKSDKERDETMERFRRGEIWVLVCTELLGRGLDLSDVGLVINYDLPTSIVSY 459
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +3
Query: 6 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNREN 185
+ + + +HGD ER+ + F+ G R L+ +D++ARG+DVQ V VI+ LP +
Sbjct: 529 NLSAACLHGDRSAEERQSSLEGFKKGIIRFLVCSDVVARGLDVQGVPFVISVTLPDEKSM 588
Query: 186 Y 188
Y
Sbjct: 589 Y 589
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +3
Query: 9 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSN 176
F V + + R ++ +F +RVLI +D+LARG D+ +V CVINY+LP++
Sbjct: 424 FEVDYFTAQLFGKRRYKMLEKFNKNENRVLICSDVLARGTDLNKVDCVINYNLPAD 479
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/58 (36%), Positives = 36/58 (62%)
Frame = +3
Query: 15 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
V+ + M Q++R++ + Q R ++L+++DL ARGID V+ V+N D +N E Y
Sbjct: 286 VTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETY 343
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/58 (36%), Positives = 36/58 (62%)
Frame = +3
Query: 15 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
V+ + M Q++R++ + Q R ++L+++DL ARGID V+ V+N D +N E Y
Sbjct: 286 VTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETY 343
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +3
Query: 9 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
F V ++H + Q++R + FR+ + +V+I TD+ +RG+D+ V V+N+++P + Y
Sbjct: 362 FRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTY 421
Query: 189 XXXXXXXXXXXXXXXXXNFVTE 254
+FVT+
Sbjct: 422 IHRVGRSARAGRFGSALSFVTQ 443
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +3
Query: 9 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
F V ++H + Q++R + FR+ + +V+I TD+ +RG+D+ V V+N+++P + Y
Sbjct: 362 FRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTY 421
Query: 189 XXXXXXXXXXXXXXXXXNFVTE 254
+FVT+
Sbjct: 422 IHRVGRSARAGRFGSALSFVTQ 443
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
+H M Q++R + +F + VL+ TD+ ARG+D+Q + VI+Y +P E Y
Sbjct: 303 LHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIY 357
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +3
Query: 24 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
+H M Q++R + +F + VL+ TD+ ARG+D+Q + VI+Y +P E Y
Sbjct: 470 LHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIY 524
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = +3
Query: 21 AMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSN 176
A+HG R ++ F ++ V+I+TD++ARGID+ + VI +DLP +
Sbjct: 288 AVHGKCSNPHRASQIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKH 339
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +3
Query: 15 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
V M + Q +R + +F+ VL++TDL +RG+D++ V VIN ++P + + Y
Sbjct: 444 VGQMQSSLTQGQRIESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQY 501
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 15 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
V + G M+Q++R +F + VLI TD+ +RG+D + + VI D P+ ++Y
Sbjct: 349 VMGLWGTMNQKKRIETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDY 406
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 6 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNREN 185
D ++HG Q++R QF + +L+ TD+ ARG+D+ V ++ YD
Sbjct: 338 DIPCMSIHGKQKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPRE 397
Query: 186 Y 188
Y
Sbjct: 398 Y 398
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 41.9 bits (94), Expect = 3e-04
Identities = 15/50 (30%), Positives = 32/50 (64%)
Frame = +3
Query: 21 AMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 170
+MH +Q +R+ + FR G + ++ +++ ARG+++ + V+NYD+P
Sbjct: 1031 SMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMP 1080
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 41.9 bits (94), Expect = 3e-04
Identities = 15/50 (30%), Positives = 32/50 (64%)
Frame = +3
Query: 21 AMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 170
+MH +Q +R+ + FR G + ++ +++ ARG+++ + V+NYD+P
Sbjct: 1031 SMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMP 1080
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +2
Query: 272 KDIEDFYHTSIVEMPSDVANLI*--GAYIFPIYILCPAFYCDIYKKIYPLSL*NALWILL 445
K DF+H+ + + G Y F + I A DI+ ++ L+ W++L
Sbjct: 372 KVFPDFHHSHFDRSLKNAIQFLIDYGFYKFGLEITMIAIGIDIFNRMDALAAIQCFWLVL 431
Query: 446 CGNNKSKFPLMITDFFSRSFLILYP*QFFTF 538
NK F I F+ ILYP QFF++
Sbjct: 432 FALNKRVFVRRIWVFYVIYMAILYPLQFFSY 462
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 36 MDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
+ +R+ EV+ R+F LI T +L G+DV+Q + VI +D P + +Y
Sbjct: 438 LHKRQTEVL-RRFHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSY 487
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +3
Query: 18 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 170
S ++ +D R++ +++F + +L+ TD+ ARG+D+ + VIN P
Sbjct: 293 SFVYSQLDATARKMNIQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFP 343
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +3
Query: 18 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 170
S ++ +D R++ +++F + +L+ TD+ ARG+D+ + VIN P
Sbjct: 293 SFVYSQLDATARKMNIQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFP 343
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 33.9 bits (74), Expect = 0.093
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 63 MRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSN 176
++ F G R+L++T + G+DV + S VI Y+ +N
Sbjct: 759 LKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATN 796
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 33.9 bits (74), Expect = 0.093
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 63 MRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSN 176
++ F G R+L++T + G+DV + S VI Y+ +N
Sbjct: 759 LKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATN 796
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 27 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
H M+ +R + + +G +V++ T GID V VI++ LP + ENY
Sbjct: 340 HAYMEPVDRSGAHQGWISGKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENY 393
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 27 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
H M+ +R + + +G +V++ T GID V VI++ LP + ENY
Sbjct: 363 HAYMEPVDRSGAHQGWISGKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENY 416
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +3
Query: 27 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
H + + +RE F ++ T GID V VI+Y P+N E+Y
Sbjct: 477 HAGLTKNQREKAHTDFMRDKITTIVATVAFGMGIDKPDVRNVIHYGCPNNIESY 530
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 30.7 bits (66), Expect = 0.86
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 27 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
H ++ R + R + V+ T GID V VI+Y LP + E Y
Sbjct: 500 HAGLNDNLRVSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGY 553
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 30.7 bits (66), Expect = 0.86
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 27 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 188
H ++ R + R + V+ T GID V VI+Y LP + E Y
Sbjct: 500 HAGLNDNLRVSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGY 553
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 114 LARGIDVQQVSCVINYDLPSNRENY 188
++RGID VS V+N+D P + Y
Sbjct: 368 VSRGIDFHHVSNVVNFDFPETTDAY 392
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 114 LARGIDVQQVSCVINYDLPSNRENY 188
++RGID VS V+N+D P + Y
Sbjct: 435 VSRGIDFHHVSNVVNFDFPETTDAY 459
>AF024499-2|AAT48621.1| 576|Caenorhabditis elegans Hypothetical
protein F42G2.4b protein.
Length = 576
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 487 FFQQVLFDPVPLTIFYI*FLHLTLNGDFKIILYFND 594
FF++ L P+ I + ++NG FK++ YF+D
Sbjct: 138 FFEEALRTNKPVHIKSLRLYDFSINGIFKLLQYFDD 173
>AF024499-1|AAT48620.1| 941|Caenorhabditis elegans Hypothetical
protein F42G2.4a protein.
Length = 941
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 487 FFQQVLFDPVPLTIFYI*FLHLTLNGDFKIILYFND 594
FF++ L P+ I + ++NG FK++ YF+D
Sbjct: 138 FFEEALRTNKPVHIKSLRLYDFSINGIFKLLQYFDD 173
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,377,905
Number of Sequences: 27780
Number of extensions: 272265
Number of successful extensions: 598
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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