Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0487
         (687 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54SH5 Cluster: Putative uncharacterized protein; n=1; ...    35   2.1  
UniRef50_Q54EX3 Cluster: Putative uncharacterized protein; n=1; ...    35   2.1  
UniRef50_A7GV16 Cluster: Putative uncharacterized protein; n=7; ...    34   3.7  
UniRef50_Q8IE42 Cluster: Putative uncharacterized protein PF13_0...    33   4.9  
UniRef50_A2Q7E8 Cluster: Contig An01c0030, complete genome; n=1;...    33   8.6  
UniRef50_Q4UNB8 Cluster: Uncharacterized protein RF_0089 precurs...    33   8.6  

>UniRef50_Q54SH5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 142

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
 Frame = -2

Query: 581 IFFHNYIPFMVWLRILLKVYITVIGSVVNLIRDFFLITFTHNRHDSEDDCHILVSFLWRY 402
           I F N I F V    +L + I +I  V+NLI + F  TF    +       I V F+W Y
Sbjct: 14  ISFRNVIIFSV----ILFIAINIIPKVINLIINIFYFTFNIIYYSLYILLCISVIFVWLY 69

Query: 401 -FCII--IFSCFR 372
             C++  +F CFR
Sbjct: 70  ILCVLEELFYCFR 82


>UniRef50_Q54EX3 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 497

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +1

Query: 250 YPCGPDHYLCIINIVFVLFTHTIPTQENLSVYHFNVHFYMARK-HENIIIQKY 405
           Y C PDH   I+ I+F++  ++I T  ++  + + ++F +AR  +E+ +I  +
Sbjct: 44  YYCQPDHQRYIVRIIFMIPIYSIFTILSIIFHQYEIYFALARDCYESYVIYSF 96


>UniRef50_A7GV16 Cluster: Putative uncharacterized protein; n=7;
           Bacillus cereus group|Rep: Putative uncharacterized
           protein - Bacillus cereus subsp. cytotoxis NVH 391-98
          Length = 229

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = -2

Query: 617 FFMVLTLPDQINIFFHNYIPFMVWLRILLKVY-ITVIGSVVNLI 489
           FF+V  +   I +F  N  P+M  L I L  Y IT++G++VNLI
Sbjct: 98  FFVVAGIYKIIMMFMGNDTPYMKVLSIYLYTYTITILGAIVNLI 141


>UniRef50_Q8IE42 Cluster: Putative uncharacterized protein PF13_0155;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PF13_0155 - Plasmodium falciparum
            (isolate 3D7)
          Length = 2668

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +1

Query: 265  DHYLCIINIVFVLFTHTIPTQENLSVYHFNVHFYMARKHENIIIQKYLHKKLTR 426
            ++Y+C INI++ LF  T+       +Y FN  FY   K  +I + +   K L +
Sbjct: 1711 EYYICDINILYELFILTLKEMNLFDIYDFN-WFYKKYKLISISLNRTYRKNLKK 1763


>UniRef50_A2Q7E8 Cluster: Contig An01c0030, complete genome; n=1;
           Aspergillus niger|Rep: Contig An01c0030, complete genome
           - Aspergillus niger
          Length = 842

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
 Frame = -2

Query: 536 LLKVYITVIGSVVNLIRDFFLITFTH-NRHDSEDDCHILVSFLWRYFCIII--FSCFRAM 366
           LL V + V+       + F ++++T  N  +  D  HI+  F+ +Y+ I+   ++C +A+
Sbjct: 108 LLHVDLEVVHIYNQPAQLFEILSYTSANESEGSDSSHIV--FVGKYWDIVYVSYNCQQAL 165

Query: 365 *KCTLK*YTDRFSWVGIVCVNNTN 294
             C  + + DR  WV ++C++  N
Sbjct: 166 RFCRNQDF-DRLLWVDLLCIDQAN 188


>UniRef50_Q4UNB8 Cluster: Uncharacterized protein RF_0089 precursor;
           n=10; Rickettsia|Rep: Uncharacterized protein RF_0089
           precursor - Rickettsia felis (Rickettsia azadi)
          Length = 1138

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = -2

Query: 557 FMVWLRILLKVYITVIGSVVNLIRDFFLITFTHNRHDSEDDCHILVSFLWRYFCIIIF 384
           FMV   I+  + I ++G +  L    FL T+T N  DS     +++SFL +   ++ F
Sbjct: 512 FMVNATIMCMISIVILGILAPLFVPMFLFTYTRNYFDSW--VKLMISFLLQPMVVVTF 567


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,615,909
Number of Sequences: 1657284
Number of extensions: 13734768
Number of successful extensions: 28206
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28196
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)