Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0487
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.3  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   2.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.5  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 344 ITLTYISTWLENTR 385
           +TLT +STW  N R
Sbjct: 126 MTLTQVSTWFANAR 139


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 95   QNVRSEIIFFFILYIYK 145
            Q VR++I FF+++  YK
Sbjct: 1021 QEVRAKIYFFYLVKFYK 1037


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 95  QNVRSEIIFFFILYIYK 145
           Q VR++I FF+++  YK
Sbjct: 302 QEVRAKIYFFYLVKFYK 318


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 344 ITLTYISTWLENTRILLYRNI 406
           IT++ +S W  N RI   +NI
Sbjct: 272 ITVSQVSNWFGNKRIRYKKNI 292


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/36 (22%), Positives = 19/36 (52%)
 Frame = +2

Query: 284 LISYLYYLHIQYLPKKICLYITLTYISTWLENTRIL 391
           L ++LY++           ++T+T +  W++N R +
Sbjct: 436 LDAFLYWVDEILANHNDVYFVTMTQVIQWIQNPRTI 471


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 481 FFSLHLRTIGTTVKTIVTFLSV 416
           FF L+ RTI      ++TFL V
Sbjct: 311 FFELNRRTILGVSNAVITFLIV 332


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 132 KMKKKIISERTFC 94
           K+K K++ + T+C
Sbjct: 30  KLKSKVVGDETYC 42


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/33 (21%), Positives = 16/33 (48%)
 Frame = +2

Query: 290 SYLYYLHIQYLPKKICLYITLTYISTWLENTRI 388
           S +Y   ++ +    CL ++   +  W +N R+
Sbjct: 138 SNMYLSRLRRIEIATCLRLSEKQVKIWFQNRRV 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,679
Number of Sequences: 336
Number of extensions: 4283
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)