Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0487
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45525| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_14826| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_41956| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_45427| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_42082| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_50465| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_21764| Best HMM Match : TPP_enzyme_N (HMM E-Value=1.1e-06) 30 2.0
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_38326| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_13329| Best HMM Match : C1_2 (HMM E-Value=7.3) 29 2.7
SB_30574| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_26762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_19181| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_9069| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_25921| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_18012| Best HMM Match : Flavoprotein (HMM E-Value=4.4) 29 3.5
SB_9512| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_50032| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_42589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004) 29 3.5
SB_30600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_30032| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-06) 29 4.7
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 29 4.7
SB_33980| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_29495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_22029| Best HMM Match : Copine (HMM E-Value=3.6e-24) 29 4.7
SB_11588| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_4523| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_59238| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_56430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_24159| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 28 6.2
SB_1540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_56967| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_54757| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_47635| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_43731| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_43613| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_43412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_41197| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_39514| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_34444| Best HMM Match : Cadherin (HMM E-Value=0.0043) 28 6.2
SB_31108| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_24786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_23700| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_21994| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_20114| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_18643| Best HMM Match : Ion_trans (HMM E-Value=0) 28 6.2
SB_17901| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_9445| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_8174| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_5183| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_4560| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_57745| Best HMM Match : Extensin_2 (HMM E-Value=0.69) 28 8.1
SB_50135| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_20397| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_15561| Best HMM Match : Protamine_P2 (HMM E-Value=8.8) 28 8.1
SB_7839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_58927| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_49201| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_45377| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_43133| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_43000| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_31357| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_19315| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_17082| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_13423| Best HMM Match : 7tm_1 (HMM E-Value=5.8e-26) 28 8.1
SB_12793| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_9975| Best HMM Match : 7tm_2 (HMM E-Value=1.9e-38) 28 8.1
SB_524| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_45525| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 76 Y*LPLVPNSCSPGDPL 29
Y +P+V NSCSPGDPL
Sbjct: 7 YLIPMVSNSCSPGDPL 22
>SB_14826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/15 (93%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = -3
Query: 70 LPLVP-NSCSPGDPL 29
LPLVP NSCSPGDPL
Sbjct: 25 LPLVPSNSCSPGDPL 39
>SB_41956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3
Query: 67 PLVPNSCSPGDPL 29
PLV NSCSPGDPL
Sbjct: 2 PLVSNSCSPGDPL 14
>SB_45427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 103 HVLSECQFEY*LPLVPNSCSPGDPL 29
H+ + PL+ NSCSPGDPL
Sbjct: 11 HLTTNAATRVRFPLISNSCSPGDPL 35
>SB_42082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 28 VVDPPGCRNSARVAVNIQID 87
+VDPPGCRNS A++ ID
Sbjct: 15 LVDPPGCRNSIHKALDAAID 34
>SB_50465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
+PL+ NSCSPGDPL
Sbjct: 52 IPLLSNSCSPGDPL 65
>SB_21764| Best HMM Match : TPP_enzyme_N (HMM E-Value=1.1e-06)
Length = 183
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 28 VVDPPGCRNSARVAVNIQID 87
+VDPPGCRNS R + ++
Sbjct: 15 LVDPPGCRNSIRTVAQLLVE 34
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 28 VVDPPGCRNSARVAV 72
+VDPPGCRNS +V V
Sbjct: 70 LVDPPGCRNSMKVCV 84
>SB_38326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 28 VVDPPGCRNSARVAVNIQI 84
+VDPPGCRNS R I I
Sbjct: 15 LVDPPGCRNSIRSTTTITI 33
>SB_13329| Best HMM Match : C1_2 (HMM E-Value=7.3)
Length = 176
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 103 HVLSECQFEY*LPLVPNSCSPGDPL 29
H L EC + + + NSCSPGDPL
Sbjct: 41 HTLMECDY---VNDISNSCSPGDPL 62
>SB_30574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3
Query: 67 PLVPNSCSPGDPL 29
PL NSCSPGDPL
Sbjct: 19 PLASNSCSPGDPL 31
>SB_26762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -3
Query: 112 FRAHVLSECQFEY*-LP-LVPNSCSPGDPL 29
F HV C+ Y P L+ NSCSPGDPL
Sbjct: 52 FVNHVGRSCEVVYQHFPCLISNSCSPGDPL 81
>SB_19181| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3
Query: 67 PLVPNSCSPGDPL 29
P++ NSCSPGDPL
Sbjct: 16 PVISNSCSPGDPL 28
>SB_9069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3
Query: 67 PLVPNSCSPGDPL 29
PL NSCSPGDPL
Sbjct: 6 PLASNSCSPGDPL 18
>SB_25921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
L L+ NSCSPGDPL
Sbjct: 35 LDLISNSCSPGDPL 48
>SB_18012| Best HMM Match : Flavoprotein (HMM E-Value=4.4)
Length = 180
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3
Query: 67 PLVPNSCSPGDPL 29
P++ NSCSPGDPL
Sbjct: 54 PILSNSCSPGDPL 66
>SB_9512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 28 VVDPPGCRNSARVAVNIQIDIPTER 102
+VDPPGCRNS +V +++ D P+ +
Sbjct: 15 LVDPPGCRNSIKVHKDVK-DKPSHQ 38
>SB_50032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 76 Y*LPLVPNSCSPGDPL 29
Y + L+ NSCSPGDPL
Sbjct: 29 YRVSLISNSCSPGDPL 44
>SB_42589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
+P V NSCSPGDPL
Sbjct: 56 IPPVSNSCSPGDPL 69
>SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004)
Length = 610
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 387 ILVFSSHVEMYVKVIYRQIFLGRYCMCK*YKYDINNA*VMVGSTRI 250
+ + +S V + V + +I LGR+ M Y YDI V +G RI
Sbjct: 511 VAIVASRVAIQVSESWFEIILGRFWMIIIYIYDIKGNSVDMGDVRI 556
>SB_30600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3
Query: 67 PLVPNSCSPGDPL 29
P++ NSCSPGDPL
Sbjct: 14 PVLSNSCSPGDPL 26
>SB_30032| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-06)
Length = 819
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 329 KICLYITLTYISTWLENTRILLYRNIS 409
K+C I LTY+ TWL + ++ R++S
Sbjct: 508 KVCCGIGLTYVMTWLPSGITIIARSLS 534
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3
Query: 67 PLVPNSCSPGDPL 29
PL NSCSPGDPL
Sbjct: 84 PLSSNSCSPGDPL 96
>SB_33980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3
Query: 67 PLVPNSCSPGDPL 29
P+ NSCSPGDPL
Sbjct: 15 PITSNSCSPGDPL 27
>SB_29495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
+P + NSCSPGDPL
Sbjct: 34 IPALSNSCSPGDPL 47
>SB_22029| Best HMM Match : Copine (HMM E-Value=3.6e-24)
Length = 726
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 329 KICLYITLTYISTWLENTRILLYRNIS 409
K+C I LTY+ TWL + ++ R++S
Sbjct: 124 KVCCGIGLTYVMTWLPSGITIIARSLS 150
>SB_11588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -3
Query: 97 LSECQFEY*LPL-VPNSCSPGDPL 29
+ CQF+ L + NSCSPGDPL
Sbjct: 1 MDACQFKADLVIKTSNSCSPGDPL 24
>SB_4523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3
Query: 67 PLVPNSCSPGDPL 29
P + NSCSPGDPL
Sbjct: 43 PTISNSCSPGDPL 55
>SB_59238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3
Query: 64 LVPNSCSPGDPL 29
LV NSCSPGDPL
Sbjct: 24 LVSNSCSPGDPL 35
>SB_56430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
+ L+ NSCSPGDPL
Sbjct: 31 ISLISNSCSPGDPL 44
>SB_24159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3
Query: 64 LVPNSCSPGDPL 29
LV NSCSPGDPL
Sbjct: 17 LVSNSCSPGDPL 28
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 28 VVDPPGCRNSARVAVNIQIDIPTERAL 108
+VDPPGCRNS + I I +P A+
Sbjct: 32 LVDPPGCRNSIMDSGLITIFLPIALAI 58
>SB_1540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3
Query: 67 PLVPNSCSPGDPL 29
P+ NSCSPGDPL
Sbjct: 9 PVTSNSCSPGDPL 21
>SB_56967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3
Query: 64 LVPNSCSPGDPL 29
LV NSCSPGDPL
Sbjct: 9 LVSNSCSPGDPL 20
>SB_54757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
+ L+ NSCSPGDPL
Sbjct: 31 ISLISNSCSPGDPL 44
>SB_47635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
+ L+ NSCSPGDPL
Sbjct: 31 ISLISNSCSPGDPL 44
>SB_43731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3
Query: 64 LVPNSCSPGDPL 29
LV NSCSPGDPL
Sbjct: 5 LVSNSCSPGDPL 16
>SB_43613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
+ L+ NSCSPGDPL
Sbjct: 31 ISLISNSCSPGDPL 44
>SB_43412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
+ L+ NSCSPGDPL
Sbjct: 31 ISLISNSCSPGDPL 44
>SB_41197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3
Query: 64 LVPNSCSPGDPL 29
LV NSCSPGDPL
Sbjct: 2 LVSNSCSPGDPL 13
>SB_39514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
L +V NSCSPGDPL
Sbjct: 17 LTVVSNSCSPGDPL 30
>SB_34444| Best HMM Match : Cadherin (HMM E-Value=0.0043)
Length = 205
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 28 VVDPPGCRNSARVAVNIQI 84
+VDPPGCRNS V+ I
Sbjct: 15 LVDPPGCRNSMNANVSYSI 33
>SB_31108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
+ L+ NSCSPGDPL
Sbjct: 31 ISLISNSCSPGDPL 44
>SB_24786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3
Query: 64 LVPNSCSPGDPL 29
LV NSCSPGDPL
Sbjct: 26 LVSNSCSPGDPL 37
>SB_23700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 79 EY*LPLVPNSCSPGDPL 29
E+ + V NSCSPGDPL
Sbjct: 4 EFRITAVSNSCSPGDPL 20
>SB_21994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
+ L+ NSCSPGDPL
Sbjct: 32 ISLISNSCSPGDPL 45
>SB_20114| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
LP NSCSPGDPL
Sbjct: 17 LPAPSNSCSPGDPL 30
>SB_18643| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1885
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 548 WLRILLKVYITVIGS-VVNLIRDFFLITFTHNRHDSEDDCHI 426
W+ I +YI +I ++N+ F ++TF + + DC +
Sbjct: 1158 WVAIYYVIYIIIIAFFMINIFVGFVIVTFQNEGEEEFKDCEL 1199
>SB_17901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3
Query: 64 LVPNSCSPGDPL 29
LV NSCSPGDPL
Sbjct: 26 LVSNSCSPGDPL 37
>SB_9445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 82 FEY*LPLVPNSCSPGDPL 29
++Y + + NSCSPGDPL
Sbjct: 14 WKYAIDIASNSCSPGDPL 31
>SB_8174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
+ L+ NSCSPGDPL
Sbjct: 31 ISLISNSCSPGDPL 44
>SB_5183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 28 VVDPPGCRNSARVAV 72
+VDPPGCRNS ++ V
Sbjct: 15 LVDPPGCRNSMKMKV 29
>SB_4560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
+ L+ NSCSPGDPL
Sbjct: 29 ISLISNSCSPGDPL 42
>SB_57745| Best HMM Match : Extensin_2 (HMM E-Value=0.69)
Length = 472
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 79 EY*LPLVPNSCSPGDPL 29
+Y +V NSCSPGDPL
Sbjct: 342 QYLHSIVSNSCSPGDPL 358
>SB_50135| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 64 LVPNSCSPGDPL 29
L+ NSCSPGDPL
Sbjct: 17 LISNSCSPGDPL 28
>SB_20397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 259 GPDHYLCIINIVFVLFTHTIPTQENLSVYH 348
G HY +NIV ++ ++P L V+H
Sbjct: 92 GRHHYKLALNIVLFIYPKSLPLNSRLCVFH 121
>SB_15561| Best HMM Match : Protamine_P2 (HMM E-Value=8.8)
Length = 182
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 28 VVDPPGCRNSARVAVNI 78
+VDPPGCRNS +A+ +
Sbjct: 15 LVDPPGCRNSMCLALTL 31
>SB_7839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
+P NSCSPGDPL
Sbjct: 7 MPRASNSCSPGDPL 20
>SB_58927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 64 LVPNSCSPGDPL 29
L+ NSCSPGDPL
Sbjct: 8 LISNSCSPGDPL 19
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3
Query: 67 PLVPNSCSPGDPL 29
P NSCSPGDPL
Sbjct: 1191 PFASNSCSPGDPL 1203
>SB_49201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/14 (78%), Positives = 13/14 (92%), Gaps = 1/14 (7%)
Frame = -3
Query: 67 PLVP-NSCSPGDPL 29
P++P NSCSPGDPL
Sbjct: 63 PILPSNSCSPGDPL 76
>SB_45377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -3
Query: 88 CQFEY*LPLVPNSCSPGDPL 29
CQ E L NSCSPGDPL
Sbjct: 12 CQMEV---LASNSCSPGDPL 28
>SB_43133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3
Query: 67 PLVPNSCSPGDPL 29
P V NSCSPGDPL
Sbjct: 8 PGVSNSCSPGDPL 20
>SB_43000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
LP NSCSPGDPL
Sbjct: 11 LPQKSNSCSPGDPL 24
>SB_31357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 64 LVPNSCSPGDPL 29
L+ NSCSPGDPL
Sbjct: 40 LISNSCSPGDPL 51
>SB_19315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 76 Y*LPLVPNSCSPGDPL 29
Y + L NSCSPGDPL
Sbjct: 7 YFIMLASNSCSPGDPL 22
>SB_17082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 64 LVPNSCSPGDPL 29
L+ NSCSPGDPL
Sbjct: 21 LISNSCSPGDPL 32
>SB_13423| Best HMM Match : 7tm_1 (HMM E-Value=5.8e-26)
Length = 375
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -2
Query: 530 KVYITV-IGSVVNLIRD-FFLITFTHNRHDSEDDCHILVSFLW 408
KV I V I ++ ++ D FF + F H R + CHI++ +W
Sbjct: 107 KVSIIVSISNLTSIATDRFFNVFFPHKRIITIKRCHIIIVLIW 149
>SB_12793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 64 LVPNSCSPGDPL 29
L+ NSCSPGDPL
Sbjct: 16 LISNSCSPGDPL 27
>SB_9975| Best HMM Match : 7tm_2 (HMM E-Value=1.9e-38)
Length = 1101
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3
Query: 70 LPLVPNSCSPGDPL 29
L L NSCSPGDPL
Sbjct: 659 LQLASNSCSPGDPL 672
>SB_524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3
Query: 67 PLVPNSCSPGDPL 29
P + NSCSPGDPL
Sbjct: 8 PEISNSCSPGDPL 20
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,221,813
Number of Sequences: 59808
Number of extensions: 437645
Number of successful extensions: 1706
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 1648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1705
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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