Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0486
(647 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O75351 Cluster: Vacuolar protein sorting-associating pr... 144 2e-33
UniRef50_Q60PW2 Cluster: Putative uncharacterized protein CBG220... 138 1e-31
UniRef50_Q9BL83 Cluster: Related to yeast vacuolar protein sorti... 136 6e-31
UniRef50_Q4RVG5 Cluster: Chromosome 15 SCAF14992, whole genome s... 66 7e-10
UniRef50_A2F3P9 Cluster: ATPase, AAA family protein; n=1; Tricho... 61 2e-08
UniRef50_A7SXZ8 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ... 51 2e-05
UniRef50_Q2GQH1 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q7R1D4 Cluster: GLP_306_32875_31316; n=4; Giardia intes... 43 0.007
UniRef50_Q4X5E3 Cluster: ATPase, putative; n=5; Plasmodium|Rep: ... 41 0.030
UniRef50_A0DGV4 Cluster: Chromosome undetermined scaffold_5, who... 40 0.039
UniRef50_A0CBD0 Cluster: Chromosome undetermined scaffold_164, w... 36 0.84
UniRef50_A4XIK2 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q5CSB4 Cluster: Katanin p60/fidgetin family AAA ATpase;... 34 3.4
UniRef50_A2D8M7 Cluster: ATPase, AAA family protein; n=2; Tricho... 33 6.0
UniRef50_UPI0000D5667A Cluster: PREDICTED: similar to CG15009-PB... 33 7.9
UniRef50_Q4RG56 Cluster: Chromosome 2 SCAF15106, whole genome sh... 33 7.9
UniRef50_Q240K0 Cluster: ATPase, AAA family protein; n=3; Oligoh... 33 7.9
UniRef50_O51042 Cluster: Uncharacterized protein BB_0009; n=3; B... 33 7.9
>UniRef50_O75351 Cluster: Vacuolar protein sorting-associating
protein 4B (Suppressor of K(+) transport growth defect
1); n=86; Eukaryota|Rep: Vacuolar protein
sorting-associating protein 4B (Suppressor of K(+)
transport growth defect 1) - Homo sapiens (Human)
Length = 444
Score = 144 bits (348), Expect = 2e-33
Identities = 66/81 (81%), Positives = 73/81 (90%)
Frame = +2
Query: 11 RDALMQPVRKVQSATHFKKISGPSPTDPNVIVNDLLTPCSPGDPGAIEMTWIDVPSDKLG 190
RDALMQPVRKVQSATHFKK+ GPS DPN +V+DLLTPCSPGDPGAIEMTW+DVP DKL
Sbjct: 346 RDALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDVPGDKLL 405
Query: 191 EPPVTMSDMLRSLAVSKPTVN 253
EP V+MSDMLRSL+ +KPTVN
Sbjct: 406 EPVVSMSDMLRSLSNTKPTVN 426
>UniRef50_Q60PW2 Cluster: Putative uncharacterized protein CBG22083;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG22083 - Caenorhabditis
briggsae
Length = 259
Score = 138 bits (334), Expect = 1e-31
Identities = 60/81 (74%), Positives = 70/81 (86%)
Frame = +2
Query: 11 RDALMQPVRKVQSATHFKKISGPSPTDPNVIVNDLLTPCSPGDPGAIEMTWIDVPSDKLG 190
+DALMQPVR+VQSATHFK +SGPSP DPN+IVNDLL+PCSPGDP AI M+W+DVP DKL
Sbjct: 159 KDALMQPVRRVQSATHFKHVSGPSPKDPNIIVNDLLSPCSPGDPHAIAMSWLDVPGDKLA 218
Query: 191 EPPVTMSDMLRSLAVSKPTVN 253
PP++M D+ RSLA KPTVN
Sbjct: 219 NPPLSMQDICRSLAQVKPTVN 239
>UniRef50_Q9BL83 Cluster: Related to yeast vacuolar protein sorting
factor protein 4; n=46; Eukaryota|Rep: Related to yeast
vacuolar protein sorting factor protein 4 -
Caenorhabditis elegans
Length = 430
Score = 136 bits (328), Expect = 6e-31
Identities = 60/81 (74%), Positives = 68/81 (83%)
Frame = +2
Query: 11 RDALMQPVRKVQSATHFKKISGPSPTDPNVIVNDLLTPCSPGDPGAIEMTWIDVPSDKLG 190
+DALMQPVR+VQSATHFK +SGPSP DPNVI +DLLTPCSPGDP AI M W+DVP DKL
Sbjct: 330 KDALMQPVRRVQSATHFKHVSGPSPKDPNVIAHDLLTPCSPGDPHAIAMNWLDVPGDKLA 389
Query: 191 EPPVTMSDMLRSLAVSKPTVN 253
PP++M D+ RSLA KPTVN
Sbjct: 390 NPPLSMQDISRSLASVKPTVN 410
>UniRef50_Q4RVG5 Cluster: Chromosome 15 SCAF14992, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 15 SCAF14992, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 381
Score = 66.1 bits (154), Expect = 7e-10
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = +2
Query: 134 GDPGAIEMTWIDVPSDKLGEPPVTMSDMLRSLAVSKPTVN 253
GDP AIEMTW+DVP +KL EP V+M DMLRSLA +KPTVN
Sbjct: 324 GDPNAIEMTWMDVPGEKLLEPVVSMPDMLRSLANTKPTVN 363
>UniRef50_A2F3P9 Cluster: ATPase, AAA family protein; n=1;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 454
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = +2
Query: 11 RDALMQPVRKVQSATHFKKISGPSPTDPNVIVNDLLTPCSPGDPGAIEMTWIDVPSDKLG 190
RDALMQP+R++Q ATHFKK+ + V + + CSP G++ W ++P + L
Sbjct: 357 RDALMQPIRELQKATHFKKVK--AKDTKGVERDGVWVACSPSARGSVAKRWDELPPEDLA 414
Query: 191 EPPVTMSDMLRSLAVSKPTVN 253
+P MS SL+ +P+V+
Sbjct: 415 QPIANMSHFNASLSKVRPSVS 435
>UniRef50_A7SXZ8 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 284
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/79 (34%), Positives = 44/79 (55%)
Frame = +2
Query: 14 DALMQPVRKVQSATHFKKISGPSPTDPNVIVNDLLTPCSPGDPGAIEMTWIDVPSDKLGE 193
DA+ +PVR++Q +TH+K+ +G S PCS G+PG + D+P K+
Sbjct: 198 DAVFEPVRELQRSTHWKQQAGKSAP-----------PCSEGEPGCVTCLLKDLPPQKVTP 246
Query: 194 PPVTMSDMLRSLAVSKPTV 250
PV + D +RSL+ + T+
Sbjct: 247 RPVVLEDFIRSLSHNGSTI 265
>UniRef50_Q2GQH1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1030
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/80 (33%), Positives = 40/80 (50%)
Frame = +2
Query: 17 ALMQPVRKVQSATHFKKISGPSPTDPNVIVNDLLTPCSPGDPGAIEMTWIDVPSDKLGEP 196
AL P+ +VQ A F+ + + + TPC+ G+ GA+ MTW VP ++L EP
Sbjct: 633 ALAAPLERVQRAEWFRVVERAEDGE------GMYTPCAEGEEGAVAMTWEGVPMNRLREP 686
Query: 197 PVTMSDMLRSLAVSKPTVNV 256
VT D + L K +V
Sbjct: 687 AVTEEDFVSVLRDRKVKASV 706
>UniRef50_Q7R1D4 Cluster: GLP_306_32875_31316; n=4; Giardia
intestinalis|Rep: GLP_306_32875_31316 - Giardia lamblia
ATCC 50803
Length = 519
Score = 42.7 bits (96), Expect = 0.007
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +2
Query: 11 RDALMQPVRKVQSATHFKKISGPSPTDPNVIVNDLLTPCSPGDPGA--IEMTWIDVPSD- 181
R+ALM P+R++Q A +F K G PC DPGA + +T + SD
Sbjct: 372 REALMVPIRELQRAEYFTKKDG------------FYYPCEANDPGAEKLSLTDFTLNSDD 419
Query: 182 -KLGEPPVTMSDMLRSLAVSKPTVN 253
KLG PPVT M +L+ +K +V+
Sbjct: 420 RKLGVPPVTRRHMDMALSTTKSSVS 444
>UniRef50_Q4X5E3 Cluster: ATPase, putative; n=5; Plasmodium|Rep:
ATPase, putative - Plasmodium chabaudi
Length = 430
Score = 40.7 bits (91), Expect = 0.030
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +2
Query: 11 RDALMQPVRKVQSATHFKKISGPSPTDPNVIVNDLLTPCSPGDPGA--IEMTWIDVPSDK 184
RDA+ PV+K + FK++ N I PCSPGDP IE + + ++
Sbjct: 337 RDAVYMPVKKCLLSKFFKQVK-----KNNKIY---YMPCSPGDPDPTKIEKNVMSINENE 388
Query: 185 LGEPPVTMSDMLRSLAVSKPTVNV 256
L PP+T+ D +++ SKP++++
Sbjct: 389 LLLPPLTLQDFKIAISNSKPSLSL 412
>UniRef50_A0DGV4 Cluster: Chromosome undetermined scaffold_5, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_5,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 433
Score = 40.3 bits (90), Expect = 0.039
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 RDALMQPVRKVQSATHFKKISGPSPTDPNVIVNDL-LTPCSPGDPGAIEMTWIDVPSDKL 187
RDA ++ +R +Q ATHFK++ I N + T CS DP A ++T + ++
Sbjct: 343 RDASLEQLRILQKATHFKRVQ---------IQNQMKYTVCSASDPQAEKITMKSIEKGQI 393
Query: 188 GEPPVTMSDMLRSLAVSKPTVN 253
P + D L L KP+V+
Sbjct: 394 FVPEILYDDFLAVLPKCKPSVS 415
>UniRef50_A0CBD0 Cluster: Chromosome undetermined scaffold_164,
whole genome shotgun sequence; n=3;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_164, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 443
Score = 35.9 bits (79), Expect = 0.84
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +2
Query: 11 RDALMQPVRKVQSATHFKKISGPSPTDPNVIVNDLLTPCSPGDPGAIEMTWIDVPSDKLG 190
RDA+ +PVRK+QSA FK+I P + + TP + + G T++++ +
Sbjct: 354 RDAVYEPVRKLQSAKKFKQI----PVNGQL----KWTPVAENEDGT-PKTFMELSQGDIA 404
Query: 191 EPPVTMSDMLRSLAVSKPTVN 253
P V +D L +L SK +V+
Sbjct: 405 IPDVCYNDFLLALKKSKKSVS 425
>UniRef50_A4XIK2 Cluster: Putative uncharacterized protein; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Putative uncharacterized protein - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 341
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/25 (64%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
Frame = +3
Query: 33 YVKYNLPH-TLKKYLVRAQLILMLL 104
Y KYN+ H TL+KY+VRA LIL+L+
Sbjct: 47 YYKYNVIHKTLQKYIVRASLILILI 71
>UniRef50_Q5CSB4 Cluster: Katanin p60/fidgetin family AAA ATpase;
n=2; Cryptosporidium|Rep: Katanin p60/fidgetin family
AAA ATpase - Cryptosporidium parvum Iowa II
Length = 462
Score = 33.9 bits (74), Expect = 3.4
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Frame = +2
Query: 11 RDALMQPVRKVQSATHFKKISGPSPTDP---NVIVNDLL--TPCS-PG-----DPGAIEM 157
+DAL +P+RK + FKK+ + D N N + TPCS P D
Sbjct: 351 KDALFEPIRKCSESNWFKKVVIMNNNDEITNNNAENFKIYWTPCSQPSNIDHYDKELYRK 410
Query: 158 TWI-DVPSDKLGEPPVTMSDMLRSLAVSKPTV 250
T + D+P+++L P +T SD++ L+ +K ++
Sbjct: 411 TSLYDIPNNQLLPPKLTKSDLIHVLSKTKSSI 442
>UniRef50_A2D8M7 Cluster: ATPase, AAA family protein; n=2;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 446
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 125 CSPGDPGAIEMTWID--VPSDKLGEPPVTMSDMLRSLAVSKPTVN 253
C+P PGA + + D P+DK+ PPV D ++ PTV+
Sbjct: 383 CAPNAPGARKWSLRDPDFPADKIESPPVKFEDFKEAICKIHPTVS 427
>UniRef50_UPI0000D5667A Cluster: PREDICTED: similar to CG15009-PB,
isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG15009-PB, isoform B - Tribolium castaneum
Length = 238
Score = 32.7 bits (71), Expect = 7.9
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 38 KVQSATHFKKISGPSPTDPNVIVNDLLTPC-SPGDPGAIEMTWIDVPSDKLGEPPVTMS 211
K+ A H +IS +PT +VI +++ PC + G+P +M WID +GE + +S
Sbjct: 137 KILGAHHVPRISLWAPTYMDVIGTNVILPCRTLGNPKPSQM-WIDPQGQIIGENDLRVS 194
>UniRef50_Q4RG56 Cluster: Chromosome 2 SCAF15106, whole genome shotgun
sequence; n=2; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF15106, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1617
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 62 KKISGPSPTDPNVIVNDLLTPC-SPGDPGAIEMTWIDVPSDKLGEPPVTMSDMLRS 226
K I G +P + + TPC +PG GA ++W + S + PP ++S ++R+
Sbjct: 1154 KSIFGTAPARCST-PGETTTPCRTPGKGGAERLSWEEQQSSPVPSPPTSLSAIIRT 1208
>UniRef50_Q240K0 Cluster: ATPase, AAA family protein; n=3;
Oligohymenophorea|Rep: ATPase, AAA family protein -
Tetrahymena thermophila SB210
Length = 488
Score = 32.7 bits (71), Expect = 7.9
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = +2
Query: 11 RDALMQPVRKVQSATHFKKISGPSPTDPNVIVNDLLTPCSPGDPGAIEMTWIDVPSDKLG 190
R+A +P+R Q AT FKKI P + C+P DP +D+ L
Sbjct: 397 REASYEPLRIAQRATKFKKIQ-DKDGQPKYVA------CAPSDPQGESKVLMDIQGSMLK 449
Query: 191 EPPVTMSDMLRSLAVSKPTVN 253
V++ +L KP+V+
Sbjct: 450 LQDVSIDHFELALQSCKPSVS 470
>UniRef50_O51042 Cluster: Uncharacterized protein BB_0009; n=3;
Borrelia burgdorferi group|Rep: Uncharacterized protein
BB_0009 - Borrelia burgdorferi (Lyme disease spirochete)
Length = 334
Score = 32.7 bits (71), Expect = 7.9
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -2
Query: 466 GNSIVSXFRFFFDNHKTEAIKILGTVLSTS*HIHILCNYNYLDVICH*NKFKLILPDQ 293
G I++ + FD+ + +AI IL +L + + N+N ++ I +FK+IL DQ
Sbjct: 4 GKKIINIIKLLFDDWQNKAISILIAIL-----MFVAFNFNKIESITTEKEFKIILNDQ 56
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,674,095
Number of Sequences: 1657284
Number of extensions: 10820345
Number of successful extensions: 24881
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 24130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24866
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -