Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0486
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    26   0.23 
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    26   0.23 
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   1.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   3.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   8.7  

>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
 Frame = +2

Query: 35  RKVQSATHFKKISGPSPTDPNVIVNDLLTPCSPGDPGAIEM-----TWIDVPSDKL 187
           R V+  T+F K   P+PT+ N ++N    P +  +   +++     T +D  SD++
Sbjct: 463 RFVKLWTNFAKNGDPNPTEENPLINVTWKPVTRNEMNFLDIGTKLTTGVDPDSDRM 518


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
 Frame = +2

Query: 35  RKVQSATHFKKISGPSPTDPNVIVNDLLTPCSPGDPGAIEM-----TWIDVPSDKL 187
           R V+  T+F K   P+PT+ N ++N    P +  +   +++     T +D  SD++
Sbjct: 463 RFVKLWTNFAKNGDPNPTEENPLINVTWKPVTRNEMNFLDIGTKLTTGVDPDSDRM 518


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +2

Query: 35  RKVQSATHFKKISGPSPTDPNVIVNDLLTPCSPGDPGAIEM 157
           R V+  T+F K   P+P++ N ++N    P +  +   +++
Sbjct: 463 RFVKLWTNFAKNGNPNPSEENPLINVTWKPVTRNEMNFLDI 503


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -1

Query: 617 FLN-FTFTPLIMPKFLFYYFQKEYVLLELVIINIKXKNQYL*QYLQIII 474
           F+N F +  ++M  + F        +LE+VII+I+  +Q+L  ++  +I
Sbjct: 101 FVNVFFWVIILMSNYAFTRIILLKSVLEIVIIDIEIYSQFLYGFMIYLI 149


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 315  LSLSFLTKVFHEFPQFYHIITFT 247
            L + F+  +FH F    HI+  T
Sbjct: 1338 LVIQFVAMLFHRFGTIAHILAST 1360


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 315  LSLSFLTKVFHEFPQFYHIITFT 247
            L + F+  +FH F    HI+  T
Sbjct: 1338 LVIQFVAMLFHRFGTIAHILAST 1360


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 315  LSLSFLTKVFHEFPQFYHIITFT 247
            L + F+  +FH F    HI+  T
Sbjct: 1338 LVIQFVAMLFHRFGTIAHILAST 1360


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 315  LSLSFLTKVFHEFPQFYHIITFT 247
            L + F+  +FH F    HI+  T
Sbjct: 1338 LVIQFVAMLFHRFGTIAHILAST 1360


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 193 LAKFVTRHIDPGHFYSSWV 137
           L  F+ +H++  H++ S V
Sbjct: 372 LQAFIRKHVELAHYFESLV 390


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,289
Number of Sequences: 336
Number of extensions: 2828
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)