Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0484
(641 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 179 6e-44
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 127 2e-28
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 126 6e-28
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 125 1e-27
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 124 1e-27
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 122 1e-26
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 117 2e-25
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 110 3e-23
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 109 4e-23
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 106 5e-22
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 105 1e-21
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 104 2e-21
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 103 3e-21
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 103 5e-21
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 102 8e-21
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 96 6e-19
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 96 6e-19
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 95 2e-18
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 95 2e-18
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 94 3e-18
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 93 5e-18
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 91 2e-17
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 90 4e-17
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 90 5e-17
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 87 4e-16
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 86 8e-16
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 85 1e-15
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 83 6e-15
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 82 1e-14
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 81 3e-14
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 78 2e-13
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 77 5e-13
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 77 5e-13
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 75 1e-12
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 75 2e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 74 3e-12
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 74 3e-12
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 73 4e-12
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 73 6e-12
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 72 1e-11
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 72 1e-11
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 71 2e-11
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 71 3e-11
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 69 7e-11
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 69 1e-10
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 68 2e-10
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 68 2e-10
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 67 3e-10
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 67 4e-10
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 67 4e-10
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 66 7e-10
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 66 9e-10
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 65 1e-09
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 65 1e-09
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 65 1e-09
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 65 2e-09
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 65 2e-09
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 65 2e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 64 2e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 64 3e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 64 3e-09
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 64 4e-09
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 64 4e-09
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 63 5e-09
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 63 5e-09
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 63 6e-09
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 62 8e-09
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 62 8e-09
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 62 1e-08
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 62 1e-08
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 61 2e-08
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 61 2e-08
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 61 3e-08
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 61 3e-08
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 61 3e-08
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 61 3e-08
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 60 3e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 58 2e-07
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 58 2e-07
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 58 2e-07
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 57 3e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 57 4e-07
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 56 5e-07
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 56 5e-07
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 56 7e-07
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 56 7e-07
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 52 1e-05
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 52 1e-05
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 52 1e-05
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 51 2e-05
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 50 5e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 49 1e-04
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 46 0.001
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 45 0.002
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 44 0.002
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 44 0.004
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 40 0.039
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.36
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 37 0.36
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 37 0.48
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 37 0.48
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 36 0.63
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 36 0.83
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.1
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 36 1.1
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 1.9
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 1.9
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 35 1.9
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 3.4
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 5.9
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 7.7
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 179 bits (435), Expect = 6e-44
Identities = 83/127 (65%), Positives = 94/127 (74%)
Frame = +2
Query: 248 FLTCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRXKRNFWLFRNNLCYTS 427
F + W F+STFILIFWT SLYFNFT IWYNFSYYF K K N W+F +NLCY S
Sbjct: 13 FWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSDNLCYIS 72
Query: 428 NWVIRIYCLSSSYIHCRYRY*YTSIFYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 607
NW+I IYCLSSSYI+ Y Y++ F SAT+IIAVPTGIKIF LAT HGTQINY+P+IL
Sbjct: 73 NWIISIYCLSSSYIYSSNSYWYSTYFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSIL 132
Query: 608 *RLGLYF 628
LG F
Sbjct: 133 WSLGFVF 139
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 127 bits (307), Expect = 2e-28
Identities = 59/87 (67%), Positives = 65/87 (74%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F P+GGGDPILYQHLF FFGHPEVYILILPGFGIISH+I E GKKETF
Sbjct: 204 FDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKETFGMLGMIYAMLT 263
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYFT 509
FIV AHH+FT+G+D+DTRAYFT
Sbjct: 264 IGFLGFIVWAHHMFTIGMDVDTRAYFT 290
Score = 70.5 bits (165), Expect = 3e-11
Identities = 40/84 (47%), Positives = 46/84 (54%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDL IFSLHLAG SS + D++ LF +V ITA
Sbjct: 122 HGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLL 181
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN+NTSFFD
Sbjct: 182 SLPVLAGAITMLLTDRNMNTSFFD 205
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F SAT+IIA+PTGIKIF +AT G ++ N IL +G F
Sbjct: 289 FTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIF 330
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 126 bits (303), Expect = 6e-28
Identities = 59/98 (60%), Positives = 67/98 (68%)
Frame = +3
Query: 216 IINRSKLKYIIF*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 395
++ L F PAGGGDPILYQHLF FFGHPEVYILILPGFGIISH+++ GKKE F
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPF 268
Query: 396 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 509
FIV AHH+FTVG+D+DTRAYFT
Sbjct: 269 GYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFT 306
Score = 70.5 bits (165), Expect = 3e-11
Identities = 41/84 (48%), Positives = 45/84 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDL IFSLHLAG+SS S Q PLFV AV +TA
Sbjct: 138 HAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLL 197
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
A IT+LLTDRNLNT+FFD
Sbjct: 198 SLPVLAAGITMLLTDRNLNTTFFD 221
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F SAT+IIA+PTG+K+F LAT+HG I + +L LG F
Sbjct: 305 FTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIF 346
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 125 bits (301), Expect = 1e-27
Identities = 59/98 (60%), Positives = 67/98 (68%)
Frame = +3
Query: 216 IINRSKLKYIIF*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 395
++ L F PAGGGDPILYQHLF FFGHPEVYILILPGFG+ISHI++ GKKE F
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPF 268
Query: 396 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 509
FIV AHH+FTVG+D+DTRAYFT
Sbjct: 269 GYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFT 306
Score = 68.5 bits (160), Expect = 1e-10
Identities = 40/84 (47%), Positives = 45/84 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDL IFSLHLAG+SS + Q PLFV +V ITA
Sbjct: 138 HPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLL 197
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
A IT+LLTDRNLNT+FFD
Sbjct: 198 SLPVLAAGITMLLTDRNLNTTFFD 221
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F SAT+IIA+PTG+K+F LAT+HG+ + ++ +L LG F
Sbjct: 305 FTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIF 346
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 124 bits (300), Expect = 1e-27
Identities = 58/98 (59%), Positives = 67/98 (68%)
Frame = +3
Query: 216 IINRSKLKYIIF*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 395
++ L F PAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 268
Query: 396 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 509
FIV AHH+FTVG+D+DTRAYFT
Sbjct: 269 GYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFT 306
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/84 (46%), Positives = 45/84 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDL IFSLHLAG+SS + Q PLFV +V +TA
Sbjct: 138 HAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLL 197
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
A IT+LLTDRNLNT+FFD
Sbjct: 198 SLPVLAAGITMLLTDRNLNTTFFD 221
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F SAT+IIA+PTG+K+F LAT+HG I + +L LG F
Sbjct: 305 FTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIF 346
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 122 bits (293), Expect = 1e-26
Identities = 58/108 (53%), Positives = 69/108 (63%)
Frame = +3
Query: 186 TTCFSWSYYNIINRSKLKYIIF*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 365
++ SW N S F PAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I
Sbjct: 176 SSSISWGNNNASYSSNYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVI 235
Query: 366 SQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 509
+ GK+E F F+V AHH+FTVG+D+DTRAYFT
Sbjct: 236 AHYSGKREPFGYLGMVYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFT 283
Score = 42.3 bits (95), Expect = 0.010
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F +AT+IIAVPTGIK+F +AT+ G+ + + + LG F
Sbjct: 282 FTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVF 323
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 117 bits (282), Expect = 2e-25
Identities = 57/87 (65%), Positives = 62/87 (71%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F PAGGGDPILYQHLF FFGHPEVYILILPGFGIISHI+S G K F
Sbjct: 223 FDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSG-KPVFGYLGMVYAMIS 281
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYFT 509
F+V AHH+FTVG+D+DTRAYFT
Sbjct: 282 IGVLGFLVWAHHMFTVGLDVDTRAYFT 308
Score = 74.9 bits (176), Expect = 1e-12
Identities = 40/84 (47%), Positives = 49/84 (58%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G +VDLAIFSLHL+G+SS + +LPLFV +V +TAF
Sbjct: 141 HSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLL 200
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN NT+FFD
Sbjct: 201 SLPVLAGAITMLLTDRNFNTTFFD 224
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F +AT+IIAVPTGIKIF +AT+ G I Y +L +G F
Sbjct: 307 FTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIF 348
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 110 bits (264), Expect = 3e-23
Identities = 53/87 (60%), Positives = 61/87 (70%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F +GGGDPILYQHLF FFGHPEVYILILPGFG+ISHI+S +K F
Sbjct: 228 FDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVS-TFSRKPVFGYIGMVYAMVS 286
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYFT 509
FIV AHH++TVG+D+DTRAYFT
Sbjct: 287 IGVLGFIVWAHHMYTVGLDVDTRAYFT 313
Score = 72.9 bits (171), Expect = 6e-12
Identities = 39/84 (46%), Positives = 48/84 (57%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G +VDLAIFSLH++G SS S ++PLFV ++ +TAF
Sbjct: 146 HSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLL 205
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN NTSFFD
Sbjct: 206 AVPVLAGAITMLLTDRNFNTSFFD 229
Score = 38.7 bits (86), Expect = 0.12
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F +AT+IIAVPTGIKIF +ATI I+ +L +G F
Sbjct: 312 FTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIF 353
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 109 bits (263), Expect = 4e-23
Identities = 50/85 (58%), Positives = 60/85 (70%)
Frame = +3
Query: 255 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXX 434
PAGGGDPILYQHLF FFGHPEVYILI+PGFG++SHI+S G K F
Sbjct: 222 PAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSG-KPVFGYLGMVYAMFSIG 280
Query: 435 XXXFIV*AHHIFTVGIDIDTRAYFT 509
F+V +HH++ VG+D+DTRAYFT
Sbjct: 281 ILGFLVWSHHMYAVGLDVDTRAYFT 305
Score = 75.4 bits (177), Expect = 1e-12
Identities = 41/84 (48%), Positives = 48/84 (57%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 138 HSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLL 197
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN NTSF+D
Sbjct: 198 SLPVLAGAITMLLTDRNFNTSFYD 221
Score = 41.1 bits (92), Expect = 0.022
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 619
F +AT+IIAVPTGIKIF LAT++G + +L LG
Sbjct: 304 FTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALG 342
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 106 bits (254), Expect = 5e-22
Identities = 48/85 (56%), Positives = 55/85 (64%)
Frame = +3
Query: 255 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXX 434
P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ + K F
Sbjct: 225 PEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLHVFGKIGMSWASMGIA 284
Query: 435 XXXFIV*AHHIFTVGIDIDTRAYFT 509
F+V HH+F G+DIDTRAYFT
Sbjct: 285 WMGFLVWGHHMFVAGLDIDTRAYFT 309
Score = 41.5 bits (93), Expect = 0.017
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 EGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXX 183
+G +DLA+FSLH+AG+SS F L P+ + + T+
Sbjct: 141 DGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVT 200
Query: 184 XXXXXAGAITILLTDRNLNTSFF 252
A +T+LL DR+ +TSF+
Sbjct: 201 SVPVLAAGLTLLLLDRHFSTSFY 223
Score = 37.1 bits (82), Expect = 0.36
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHG 577
F +AT++IAVPTG+K+F LATI G
Sbjct: 308 FTAATLMIAVPTGVKVFNWLATIFG 332
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 105 bits (251), Expect = 1e-21
Identities = 50/84 (59%), Positives = 57/84 (67%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 437
AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS IS K F
Sbjct: 224 AGGGDPILYQHLFWFFGHPEVYILIIPGFGIISTTIS-ANSNKSVFGYLGMVYAMCSIGI 282
Query: 438 XXFIV*AHHIFTVGIDIDTRAYFT 509
F+V +HH++TVG+D+DTRAYFT
Sbjct: 283 LGFVVWSHHMYTVGLDVDTRAYFT 306
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/85 (44%), Positives = 44/85 (51%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIF LHL+GISS +L LF AV ITA
Sbjct: 139 HSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLL 198
Query: 184 XXXXXAGAITILLTDRNLNTSFFDL 258
AG IT++LTDRN NTSFF++
Sbjct: 199 SLPVLAGGITMVLTDRNFNTSFFEV 223
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F +AT+IIAVPTGIKIF LAT +G +++ P++L LG F
Sbjct: 305 FTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVF 346
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 104 bits (249), Expect = 2e-21
Identities = 48/84 (57%), Positives = 58/84 (69%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 437
+GGGDPILY+HLF FFGHPEVYILI+PGFGIISH++S KK F
Sbjct: 224 SGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TYSKKPVFGEISMVYAMASIGL 282
Query: 438 XXFIV*AHHIFTVGIDIDTRAYFT 509
F+V +HH++ VG+D DTRAYFT
Sbjct: 283 LGFLVWSHHMYIVGLDADTRAYFT 306
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/85 (42%), Positives = 45/85 (52%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 139 HSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLL 198
Query: 184 XXXXXAGAITILLTDRNLNTSFFDL 258
+ IT+LL DRN NTSFF++
Sbjct: 199 SLPVLSAGITMLLLDRNFNTSFFEV 223
Score = 34.3 bits (75), Expect = 2.5
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPN 601
F SAT+IIA+PTGIKIF L N N N
Sbjct: 305 FTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 103 bits (248), Expect = 3e-21
Identities = 50/84 (59%), Positives = 57/84 (67%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 437
AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS +IS K F
Sbjct: 250 AGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVIS-ANSNKNVFGYLGMVYAMMSIGL 308
Query: 438 XXFIV*AHHIFTVGIDIDTRAYFT 509
FIV +HH++TVG+D+DTRAYFT
Sbjct: 309 LGFIVWSHHMYTVGLDVDTRAYFT 332
Score = 61.7 bits (143), Expect = 1e-08
Identities = 37/85 (43%), Positives = 42/85 (49%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H VDL IF LHL+GISS +L LF AV ITA
Sbjct: 165 HSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLL 224
Query: 184 XXXXXAGAITILLTDRNLNTSFFDL 258
A AIT+LLTDRNLNTSF++L
Sbjct: 225 SLPVLAAAITMLLTDRNLNTSFYEL 249
Score = 41.5 bits (93), Expect = 0.017
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 619
F +AT+IIA+PTG+KIF LAT +G +++ +L LG
Sbjct: 331 FTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALG 369
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 103 bits (246), Expect = 5e-21
Identities = 48/84 (57%), Positives = 56/84 (66%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 437
AGGGDPI YQH F FFGHPEVYILI+PGFGI+SHI+S KK F
Sbjct: 224 AGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKKPVFGEISMVYAMASIGL 282
Query: 438 XXFIV*AHHIFTVGIDIDTRAYFT 509
F+V +HH++ VG+D DTRAYFT
Sbjct: 283 LGFLVWSHHMYIVGLDADTRAYFT 306
Score = 68.1 bits (159), Expect = 2e-10
Identities = 38/85 (44%), Positives = 45/85 (52%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHL ISS S ++PLFV A+ ITAF
Sbjct: 139 HSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLL 198
Query: 184 XXXXXAGAITILLTDRNLNTSFFDL 258
+ IT+LL DRN NTSFF++
Sbjct: 199 SLPVLSAGITMLLMDRNFNTSFFEV 223
Score = 41.1 bits (92), Expect = 0.022
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQI 586
F SAT+IIA+PTGIKIF LATI+G I
Sbjct: 305 FTSATMIIAIPTGIKIFSWLATIYGGSI 332
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 102 bits (244), Expect = 8e-21
Identities = 49/85 (57%), Positives = 56/85 (65%)
Frame = +3
Query: 255 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXX 434
P GGGD +LYQHLF FFGHPEVYILILPGFG++SHII+ KK F
Sbjct: 226 PVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIA-TFSKKRVFGHVPMIAAMLMIG 284
Query: 435 XXXFIV*AHHIFTVGIDIDTRAYFT 509
FIV AHH++T GID T+AYFT
Sbjct: 285 LIGFIVWAHHMYTSGIDTSTKAYFT 309
Score = 64.1 bits (149), Expect = 3e-09
Identities = 36/84 (42%), Positives = 41/84 (48%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDL IFS HL GI S LPLFV +V +T+F
Sbjct: 142 HSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIV 201
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
A AIT+LL DRN NTSF+D
Sbjct: 202 AIPVLAAAITLLLFDRNFNTSFYD 225
Score = 36.3 bits (80), Expect = 0.63
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQI-NYNP 598
F +AT++IA+PTGIK+F +AT+ G I Y P
Sbjct: 308 FTAATMVIAIPTGIKVFNWIATMWGGSIWMYTP 340
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 96.3 bits (229), Expect = 6e-19
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F PAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++ KK F
Sbjct: 326 FDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA-TFSKKPIFGYLPMVYALVA 384
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYF 506
F+V AHH++TVG+ + +AYF
Sbjct: 385 IGGLGFVVWAHHMYTVGMTLTQQAYF 410
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/81 (38%), Positives = 44/81 (54%)
Frame = +1
Query: 13 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 192
R+VD AIF++H++G SS + ++PLF +V +TA+
Sbjct: 247 RAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLP 306
Query: 193 XXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN T+FFD
Sbjct: 307 VLAGAITMLLTDRNFGTTFFD 327
Score = 37.5 bits (83), Expect = 0.27
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F AT++IAVPTGIKIF +AT+ I++ ++ LG F
Sbjct: 410 FMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIF 451
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 96.3 bits (229), Expect = 6e-19
Identities = 67/151 (44%), Positives = 70/151 (46%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHLAGISS SFDQ+PLFV AVGITAF
Sbjct: 135 HGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLL 194
Query: 184 XXXXXAGAITILLTDRNLNTSFFDLLEEETQFYINIXXXXXXXXXXXXXXXQDLV*FLIL 363
AGAIT+LLTDRNLNTSFFD QDLV F +L
Sbjct: 195 SLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFSFSQDLVSFHML 254
Query: 364 FHXXXXXXXXXXXXX*FMLY*QLGY*DLLFE 456
F FM L Y DLLFE
Sbjct: 255 FPKKVEKSKLLVVSVSFMQSWLLVYSDLLFE 285
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/84 (53%), Positives = 54/84 (64%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 437
AGGGDP LYQHLF FFGHPEVYI+ILPGFGIIS I+S +K F
Sbjct: 266 AGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQIVS-TFSRKPVFGYLGMAYAMVAIGV 324
Query: 438 XXFIV*AHHIFTVGIDIDTRAYFT 509
F+V AHH+FT G+ ++ + YFT
Sbjct: 325 VGFVVWAHHMFTTGMSVNVKMYFT 348
Score = 60.5 bits (140), Expect = 3e-08
Identities = 33/82 (40%), Positives = 44/82 (53%)
Frame = +1
Query: 10 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 189
G +VD+AI SLH+AG SS + ++PLFV +V +TAF
Sbjct: 183 GPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSVLVTAFLLLLAL 242
Query: 190 XXXAGAITILLTDRNLNTSFFD 255
A AIT+LLTDRN T+F+D
Sbjct: 243 PVLAAAITMLLTDRNFGTTFYD 264
Score = 42.7 bits (96), Expect = 0.007
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F +AT++IAVPTGIKIF +ATI G I++ ++ LG F
Sbjct: 347 FTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIF 388
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/89 (50%), Positives = 55/89 (61%)
Frame = +3
Query: 243 IIF*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 422
+ F P GDPILYQHLF FFGHPEVYILILP FG+ISH+IS + F
Sbjct: 224 LFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNY-CRNLFGNQSMILAM 282
Query: 423 XXXXXXXFIV*AHHIFTVGIDIDTRAYFT 509
+V HH++T G+++DTRAYFT
Sbjct: 283 GCIAVLGSLVWVHHMYTTGLEVDTRAYFT 311
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 93.9 bits (223), Expect = 3e-18
Identities = 43/84 (51%), Positives = 56/84 (66%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 437
+GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F
Sbjct: 241 SGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGF 299
Query: 438 XXFIV*AHHIFTVGIDIDTRAYFT 509
F V +HH+FTVG+D D+RAYF+
Sbjct: 300 LGFCVWSHHMFTVGLDADSRAYFS 323
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/83 (40%), Positives = 44/83 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 156 HSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIIL 215
Query: 184 XXXXXAGAITILLTDRNLNTSFF 252
A +T+LL DRN NTSFF
Sbjct: 216 ALPVLAAGLTMLLMDRNFNTSFF 238
Score = 37.5 bits (83), Expect = 0.27
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 619
F A++IIA+PTG KIF LATI+G + + +L +G
Sbjct: 322 FSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVG 360
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 93.1 bits (221), Expect = 5e-18
Identities = 43/70 (61%), Positives = 49/70 (70%)
Frame = +3
Query: 300 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 479
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FTVG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 480 IDIDTRAYFT 509
+D+DTRAYFT
Sbjct: 62 MDVDTRAYFT 71
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F SAT+IIA+PTG+K+F LAT+HG I ++ +L LG F
Sbjct: 70 FTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIF 111
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 91.1 bits (216), Expect = 2e-17
Identities = 40/60 (66%), Positives = 46/60 (76%)
Frame = +3
Query: 216 IINRSKLKYIIF*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 395
++ L F PAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 210 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 269
Score = 71.7 bits (168), Expect = 1e-11
Identities = 43/84 (51%), Positives = 46/84 (54%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHLAGISS S Q PLFV +V ITA
Sbjct: 139 HAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLL 198
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
A IT+LLTDRNLNT+FFD
Sbjct: 199 SLPVLAAGITMLLTDRNLNTTFFD 222
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 90.2 bits (214), Expect = 4e-17
Identities = 49/84 (58%), Positives = 52/84 (61%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHLAGISS SFDQ+PLF+ AVGITA
Sbjct: 111 HGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLL 170
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRNLNTSFFD
Sbjct: 171 SLPVLAGAITMLLTDRNLNTSFFD 194
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 216 IINRSKLKYIIF*PAGGGDPILYQHLF*FFGHPEVYILI 332
++ L F PAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 182 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 89.8 bits (213), Expect = 5e-17
Identities = 42/87 (48%), Positives = 51/87 (58%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI +F
Sbjct: 310 FEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSSFGYYGLICAMAS 369
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYFT 509
+V HH+F VG D T +F+
Sbjct: 370 IVCLGSVVWGHHMFMVGFDSLTGVFFS 396
Score = 35.9 bits (79), Expect = 0.83
Identities = 28/82 (34%), Positives = 36/82 (43%)
Frame = +1
Query: 10 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 189
G VD +FSLHLAG+SS SF+ + V A T+
Sbjct: 235 GFGVDYLMFSLHLAGVSS----LIGSVNFISTIFSRLSFN-CSIIVWAYLFTSVLLLLSL 289
Query: 190 XXXAGAITILLTDRNLNTSFFD 255
A IT+LL DRN T+FF+
Sbjct: 290 PVLASGITMLLFDRNFGTAFFE 311
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 86.6 bits (205), Expect = 4e-16
Identities = 41/65 (63%), Positives = 46/65 (70%)
Frame = +3
Query: 315 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 494
EVYILILPGFG+ISHIISQE GKKE F F+V AHH+FTVG+D+DT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 495 RAYFT 509
RAYFT
Sbjct: 215 RAYFT 219
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F SAT+IIAVPTGIK+F LAT HGTQI Y+P L LG F
Sbjct: 218 FTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVF 259
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 85.8 bits (203), Expect = 8e-16
Identities = 40/80 (50%), Positives = 51/80 (63%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 437
+GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F
Sbjct: 241 SGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGF 299
Query: 438 XXFIV*AHHIFTVGIDIDTR 497
F V +HH+FTVG+D D R
Sbjct: 300 LGFCVWSHHMFTVGLDADKR 319
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/83 (40%), Positives = 44/83 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 156 HSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIIL 215
Query: 184 XXXXXAGAITILLTDRNLNTSFF 252
A +T+LL DRN NTSFF
Sbjct: 216 ALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 85.0 bits (201), Expect = 1e-15
Identities = 40/81 (49%), Positives = 53/81 (65%)
Frame = +3
Query: 267 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 446
GDP+LYQHLF FFGHPEVY++ILP FG+ S I++ K+ F +
Sbjct: 236 GDPVLYQHLFWFFGHPEVYVIILPVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGY 294
Query: 447 IV*AHHIFTVGIDIDTRAYFT 509
V AHH+FTVG+DID+R+YF+
Sbjct: 295 FVWAHHMFTVGLDIDSRSYFS 315
Score = 36.3 bits (80), Expect = 0.63
Identities = 20/84 (23%), Positives = 40/84 (47%)
Frame = +1
Query: 10 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 189
G ++DL++ +H+ GISS +F + ++ ++ +T+
Sbjct: 152 GVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIGSL 211
Query: 190 XXXAGAITILLTDRNLNTSFFDLL 261
AIT LL DRN+N++ +D++
Sbjct: 212 PILGVAITGLLLDRNINSTIYDVI 235
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 83.0 bits (196), Expect = 6e-15
Identities = 39/82 (47%), Positives = 48/82 (58%)
Frame = +3
Query: 264 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 443
GG+P+LYQHLF FFGHPEVY++ILP FGIIS + K F
Sbjct: 235 GGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQTSMTFASIWIAVLG 294
Query: 444 FIV*AHHIFTVGIDIDTRAYFT 509
V HH++T G+DIDTR YF+
Sbjct: 295 TSVWGHHMYTAGLDIDTRTYFS 316
Score = 46.8 bits (106), Expect = 4e-04
Identities = 26/80 (32%), Positives = 35/80 (43%)
Frame = +1
Query: 16 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 195
S+D I LH GI S + DQ+ +FV +T+F
Sbjct: 152 SLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPV 211
Query: 196 XAGAITILLTDRNLNTSFFD 255
AG++ LL DRN NTSF+D
Sbjct: 212 LAGSLLFLLLDRNFNTSFYD 231
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/82 (48%), Positives = 52/82 (63%)
Frame = +3
Query: 261 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXX 440
GGGD IL+QH+F FFGHPEVYI++LP FG+IS I+ + G + F
Sbjct: 227 GGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV-EVIGFRCVFSTVAMIYSMILIAIL 285
Query: 441 XFIV*AHHIFTVGIDIDTRAYF 506
V AHH+F VG+D+D+RAYF
Sbjct: 286 GMFVWAHHMFVVGMDVDSRAYF 307
Score = 52.8 bits (121), Expect = 7e-06
Identities = 29/86 (33%), Positives = 40/86 (46%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H + D +F++HL GISS SF LF+ A ITA
Sbjct: 141 HSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLII 200
Query: 184 XXXXXAGAITILLTDRNLNTSFFDLL 261
AG +T++L DRN NTSF+D++
Sbjct: 201 TLPVLAGGVTLILCDRNFNTSFYDVV 226
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 80.6 bits (190), Expect = 3e-14
Identities = 40/82 (48%), Positives = 49/82 (59%)
Frame = +3
Query: 264 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 443
GGDP+LYQHLF FFGHPEVY++ILP FG+ S I Q
Sbjct: 209 GGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI-QLSSLHRIPGELSLVLAMASIALIG 267
Query: 444 FIV*AHHIFTVGIDIDTRAYFT 509
+V AHH++T G+DIDTR+YFT
Sbjct: 268 SVVWAHHMYTAGLDIDTRSYFT 289
Score = 37.9 bits (84), Expect = 0.21
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +1
Query: 16 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 195
SV+ ++FSLHLAGI+S + L LF ++ + +
Sbjct: 128 SVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPV 185
Query: 196 XAGAITILLTDRNLNTSFFD 255
A IT++LTD++L T F+D
Sbjct: 186 LAVGITLILTDKHLGTCFYD 205
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 497 SIFYSATIIIAVPTGIKIFR*LATI 571
S F +AT+IIAVPTGIKIF L+++
Sbjct: 286 SYFTAATMIIAVPTGIKIFTWLSSL 310
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 78.2 bits (184), Expect = 2e-13
Identities = 43/84 (51%), Positives = 52/84 (61%)
Frame = -1
Query: 254 SKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXX 75
SK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I +R
Sbjct: 14 SKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFT 73
Query: 74 XXXIDEIPAKCSEKIARSTDLPSC 3
I+E PAKC+EKI STD P+C
Sbjct: 74 APKIEETPAKCNEKIPMSTDAPAC 97
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 76.6 bits (180), Expect = 5e-13
Identities = 42/84 (50%), Positives = 49/84 (58%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
HEG SVDLAIFSLH+AG+ S + ++PLFV AV ITA
Sbjct: 57 HEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLL 116
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN+NTSFFD
Sbjct: 117 SLPVLAGAITMLLTDRNINTSFFD 140
Score = 43.2 bits (97), Expect = 0.005
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGH 311
F PAGGGDPILYQHLF F GH
Sbjct: 139 FDPAGGGDPILYQHLFWFXGH 159
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 76.6 bits (180), Expect = 5e-13
Identities = 40/86 (46%), Positives = 49/86 (56%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F GGDPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+K F
Sbjct: 274 FFTVAGGDPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGRK-LFGFKFVVYSTLA 332
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYF 506
F V AHH+FT GID R+ F
Sbjct: 333 IGVLSFGVWAHHMFTTGIDPRIRSSF 358
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 75.4 bits (177), Expect = 1e-12
Identities = 41/84 (48%), Positives = 48/84 (57%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 138 HSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLL 197
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN NTSF+D
Sbjct: 198 SLPVLAGAITMLLTDRNFNTSFYD 221
Score = 36.3 bits (80), Expect = 0.63
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 255 PAGGGDPILYQHLF 296
PAGGGDPILYQHLF
Sbjct: 222 PAGGGDPILYQHLF 235
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/86 (44%), Positives = 47/86 (54%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I +K F
Sbjct: 231 FNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI-PVHARKPIFGYRAIAYSSLA 289
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYF 506
IV AHH+FT G R +F
Sbjct: 290 ISFLGLIVWAHHMFTSGTPGWLRMFF 315
Score = 35.9 bits (79), Expect = 0.83
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 619
F + T++IAVPTGIKIF T+ G +I N +L G
Sbjct: 315 FMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFG 353
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 74.1 bits (174), Expect = 3e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +2
Query: 287 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRXKRNFWLFRNNLCYTSNWVIRIYCLS 457
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 383
AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 249 AGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 46.4 bits (105), Expect = 6e-04
Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +2
Query: 419 YTSNWVIRIYCLSSSYIHCRYRY*YT----SIFYSATIIIAVPTGIKIFR*LATIHGTQI 586
Y WV R Y L+ +H Y + F +AT+IIAVPTGIKIF LAT +G I
Sbjct: 334 YNFVWVNRKYLLT--ILHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSI 391
Query: 587 NYNPNIL*RLGLYF 628
P +L LG F
Sbjct: 392 KMTPVMLFSLGFVF 405
Score = 46.0 bits (104), Expect = 8e-04
Identities = 31/85 (36%), Positives = 40/85 (47%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIF+LHL+G+SS +L LF A +
Sbjct: 171 HSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALFGWATWSSRSRYFL 230
Query: 184 XXXXXAGAITILLTDRNLNTSFFDL 258
IT++LTDRN NTSFF++
Sbjct: 231 -------GITMVLTDRNFNTSFFEV 248
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 73.3 bits (172), Expect = 4e-12
Identities = 39/86 (45%), Positives = 48/86 (55%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F P GGD +L+QHLF FFGHPEVYILILP GIIS ++ +K F
Sbjct: 238 FLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL-PTFSRKPIFGYAFVAYSGVA 296
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYF 506
F+V AHH+F VG+ A+F
Sbjct: 297 IGFLGFLVWAHHMFAVGLGPLANAFF 322
Score = 35.9 bits (79), Expect = 0.83
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +2
Query: 497 SIFYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 619
+ F +A+ +IAVPTG+KIF LAT+ +N ++L +G
Sbjct: 320 AFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIG 360
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 72.9 bits (171), Expect = 6e-12
Identities = 34/74 (45%), Positives = 44/74 (59%)
Frame = +3
Query: 261 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXX 440
GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +IS +K F
Sbjct: 264 GGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDLIS-THARKNIFGYRMMVWAIVAIGAL 322
Query: 441 XFIV*AHHIFTVGI 482
F+V AHH++ G+
Sbjct: 323 SFVVWAHHMYVSGM 336
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 72.1 bits (169), Expect = 1e-11
Identities = 41/84 (48%), Positives = 46/84 (54%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHLAG+SS + + LFV +V ITA
Sbjct: 121 HAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLL 180
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDRN NTSFFD
Sbjct: 181 SLPVLAGAITMLLTDRNFNTSFFD 204
Score = 37.1 bits (82), Expect = 0.36
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF 296
F PAGGGDPILYQHLF
Sbjct: 203 FDPAGGGDPILYQHLF 218
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 71.7 bits (168), Expect = 1e-11
Identities = 38/83 (45%), Positives = 48/83 (57%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 437
AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G++ F
Sbjct: 308 AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGRR-LFGFKFVVYSTLAIGV 366
Query: 438 XXFIV*AHHIFTVGIDIDTRAYF 506
F V AHH+F G+D RA F
Sbjct: 367 LSFGVWAHHMFATGLDPRLRASF 389
Score = 33.5 bits (73), Expect = 4.4
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +1
Query: 19 VDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 198
VDL + LHL+G+S+ S+ L +F + +
Sbjct: 230 VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQSGLILFAFPLL 289
Query: 199 AGAITILLTDRNLNTSFF 252
AI +LL DRN TSFF
Sbjct: 290 GSAIMMLLFDRNFGTSFF 307
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 71.3 bits (167), Expect = 2e-11
Identities = 43/84 (51%), Positives = 45/84 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDL IFSLHLAGISS S Q PLFV AV ITA
Sbjct: 127 HAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLL 186
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
A IT+LLTDRNLNT+FFD
Sbjct: 187 SLPVLAAGITMLLTDRNLNTTFFD 210
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 70.5 bits (165), Expect = 3e-11
Identities = 39/84 (46%), Positives = 47/84 (55%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVD+AIFSLHLAG+SS + ++PLFV +V ITA
Sbjct: 139 HSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLL 198
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
AGAIT+LLTDR NT+FFD
Sbjct: 199 SLPVLAGAITMLLTDRYFNTTFFD 222
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFG 308
F PAGGGDPILYQHLF FFG
Sbjct: 221 FDPAGGGDPILYQHLFWFFG 240
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQIN 589
F +AT+IIAVPTGIKIF LAT+ G+ N
Sbjct: 270 FTAATMIIAVPTGIKIFSWLATVSGSGRN 298
Score = 37.5 bits (83), Expect = 0.27
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3
Query: 444 FIV*AHHIFTVGIDIDTRAYFT 509
FIV A H++ VG+D+DTRAYFT
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFT 271
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 69.3 bits (162), Expect = 7e-11
Identities = 33/81 (40%), Positives = 43/81 (53%)
Frame = +3
Query: 255 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXX 434
PA GDP L+QH+F FFGHPEVYIL+LP G++S +I Q ++ +
Sbjct: 232 PAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEVI-QRMARRRAYGYTAIAISSVAIA 290
Query: 435 XXXFIV*AHHIFTVGIDIDTR 497
F V HH+FT D R
Sbjct: 291 SISFAVWMHHMFTAVQDFAPR 311
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 68.5 bits (160), Expect = 1e-10
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +3
Query: 243 IIF*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 368
+ F + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 224 MFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = +2
Query: 428 NWVIRIYCLSSSYIHCRYRY*YTSIFYSATIIIAVPTGIKIFR*LATI 571
N +R++ L +SY+H R+ Y+ F + TI+IA+PTG KIF + T+
Sbjct: 285 NSFVRLFGLGTSYVHIRFGSRYSRYFTTVTILIALPTGNKIFNWVTTL 332
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/78 (38%), Positives = 43/78 (55%)
Frame = +3
Query: 246 IF*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 425
+F PA GGDP+L+QHLF F+ HP VYI++LP FG++S +++ +K F
Sbjct: 245 MFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA-TYSRKNIFGYRAVAYSSL 303
Query: 426 XXXXXXFIV*AHHIFTVG 479
F HH+F G
Sbjct: 304 GIAFVGFFAWGHHMFVSG 321
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/84 (39%), Positives = 47/84 (55%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 437
A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ ++
Sbjct: 384 AYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTRR-VASKHHMIWAIYVMAY 442
Query: 438 XXFIV*AHHIFTVGIDIDTRAYFT 509
++V HH++ VG+D +R ++
Sbjct: 443 MGYLVWGHHMYLVGLDHRSRTMYS 466
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/86 (40%), Positives = 46/86 (53%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F P GG +L+QH F FGHPEVYILILPGFG+IS +I +K +
Sbjct: 239 FDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI-PVFSRKPIYGYTFVAASSVA 297
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYF 506
+ V AHH+F VG+ + +F
Sbjct: 298 IVLLGYGVWAHHMFAVGLGMYADIFF 323
Score = 39.1 bits (87), Expect = 0.089
Identities = 16/39 (41%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +2
Query: 491 YTSIFYSA-TIIIAVPTGIKIFR*LATIHGTQINYNPNI 604
Y IF++ +++IA+PTGIK+F AT+ G +I +N ++
Sbjct: 318 YADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSL 356
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = +3
Query: 264 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 443
GG P+L+QHLF F GHPEVYI+++P GI S +I+ +K F
Sbjct: 287 GGSPVLFQHLFWFLGHPEVYIVLIPALGITSEVIA-TNARKPIFGYKAMIGSILGIAVLS 345
Query: 444 FIV*AHHIFTVGID 485
FIV AHH+F G++
Sbjct: 346 FIVWAHHMFVTGMN 359
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 66.9 bits (156), Expect = 4e-10
Identities = 35/86 (40%), Positives = 45/86 (52%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F P GG+ ++++HLF FGHPEVYILILP FGI S +I +K F
Sbjct: 229 FNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI-PVFARKRLFGYSSMVFAIVL 287
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYF 506
F+V HH+FT G+ A F
Sbjct: 288 IGFLGFMVWVHHMFTTGLGPIANAIF 313
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2
Query: 497 SIFYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 607
+IF AT+ IA+PTGIKIF L TI G + Y +L
Sbjct: 311 AIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAML 347
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 66.1 bits (154), Expect = 7e-10
Identities = 31/77 (40%), Positives = 42/77 (54%)
Frame = +3
Query: 255 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXX 434
P GGG +L+QHLF FFGHPEVYI ILP GI+SHI+ ++
Sbjct: 270 PHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIG 328
Query: 435 XXXFIV*AHHIFTVGID 485
++V HH+F G++
Sbjct: 329 FLSYVVWGHHMFVSGMN 345
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 65.7 bits (153), Expect = 9e-10
Identities = 34/73 (46%), Positives = 40/73 (54%)
Frame = +3
Query: 264 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 443
GG + YQHLF FGHPEVYILILP GIIS +I +K F
Sbjct: 245 GGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI-PVHARKMLFGYSVMVFSTALIGFMG 303
Query: 444 FIV*AHHIFTVGI 482
F V +HH+FTVG+
Sbjct: 304 FTVWSHHMFTVGM 316
Score = 39.9 bits (89), Expect = 0.051
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +2
Query: 497 SIFYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 619
SIF T+ IAVPTG+KIF L+T+ G QI + +L +G
Sbjct: 322 SIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIG 362
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/77 (41%), Positives = 40/77 (51%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F P GGGDP+L+QH F F+ HP VY+L+LP FGI S + +K F
Sbjct: 246 FRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELF-PVYARKPLFGYRFVAIASFG 304
Query: 429 XXXXXFIV*AHHIFTVG 479
IV AHH+F G
Sbjct: 305 ITFLSLIVWAHHMFYTG 321
Score = 33.5 bits (73), Expect = 4.4
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 500 IFYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 619
IF T++IA+PTG+K+F L T+ + N +L +G
Sbjct: 329 IFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIG 368
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/85 (42%), Positives = 45/85 (52%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 139 HSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLL 198
Query: 184 XXXXXAGAITILLTDRNLNTSFFDL 258
+ IT+LL DRN NTSFF++
Sbjct: 199 SLPVLSAGITMLLLDRNFNTSFFEV 223
Score = 39.1 bits (87), Expect = 0.089
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILIL 335
+GGGDPILY+HLF FFG I++L
Sbjct: 224 SGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/82 (40%), Positives = 45/82 (54%)
Frame = +3
Query: 264 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 443
GG P+L+ +LF +GHPEVYI+ILP FGI S IIS +K+ F
Sbjct: 265 GGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS-SFARKQLFGYKAMVGSIIAISVLS 323
Query: 444 FIV*AHHIFTVGIDIDTRAYFT 509
F+V HH FT+G ++F+
Sbjct: 324 FLVWTHHFFTMGNSASVNSFFS 345
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/87 (37%), Positives = 47/87 (54%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++ ++ F
Sbjct: 236 FNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMALIA 294
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYFT 509
F + HH+F G+ ++FT
Sbjct: 295 TGVLAFGLWVHHMFVAGLPRLGESFFT 321
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/81 (39%), Positives = 45/81 (55%)
Frame = +3
Query: 264 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 443
GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S GK+ F
Sbjct: 270 GGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHKSMIYASGAISVLG 328
Query: 444 FIV*AHHIFTVGIDIDTRAYF 506
F+V HH FT+G + A+F
Sbjct: 329 FMVWLHHFFTMGSGANVNAFF 349
Score = 35.9 bits (79), Expect = 0.83
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +2
Query: 497 SIFYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 619
+ F AT+II++PTG+K+F L TI+ ++ + IL LG
Sbjct: 347 AFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLG 387
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/91 (38%), Positives = 46/91 (50%)
Frame = +3
Query: 234 LKYIIF*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXX 413
L + IF GG+P++Y +LF +GHPEVYILILP FG+ S + S GK+ F
Sbjct: 259 LDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR-LFGHHSMI 317
Query: 414 XXXXXXXXXXFIV*AHHIFTVGIDIDTRAYF 506
F V HH FT+G +F
Sbjct: 318 YASGAIAVLGFAVWLHHFFTMGAGASVNTFF 348
Score = 34.3 bits (75), Expect = 2.5
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +2
Query: 497 SIFYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 619
+ F AT++I++PTG+K+F L TI+ ++ + I+ LG
Sbjct: 346 TFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLG 386
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/78 (38%), Positives = 40/78 (51%)
Frame = +3
Query: 246 IF*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 425
IF PA GGDP+L+QH F F+ HP VYI++LP +IS ++ +K F
Sbjct: 238 IFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVVC-AFSRKNIFGYKAVAYSSL 296
Query: 426 XXXXXXFIV*AHHIFTVG 479
F HH+FT G
Sbjct: 297 GIAFVGFFTWGHHMFTSG 314
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/83 (40%), Positives = 44/83 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 156 HSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIIL 215
Query: 184 XXXXXAGAITILLTDRNLNTSFF 252
A +T+LL DRN NTSFF
Sbjct: 216 ALPVLAAGLTMLLMDRNFNTSFF 238
Score = 37.1 bits (82), Expect = 0.36
Identities = 15/28 (53%), Positives = 22/28 (78%), Gaps = 2/28 (7%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGH--PEVYILIL 335
+GGGDP+LY+H+F FFG P + I+I+
Sbjct: 241 SGGGDPLLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/83 (40%), Positives = 44/83 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G S+D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 156 HSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIIL 215
Query: 184 XXXXXAGAITILLTDRNLNTSFF 252
A +T+LL DRN NTSFF
Sbjct: 216 ALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 437
AGGG P+L+QHLF F+ HP VYI+ILP G++S I++ +K F
Sbjct: 272 AGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFGYKPMVYSICGIAG 330
Query: 438 XXFIV*AHHIFTVGID 485
FIV HH+F G++
Sbjct: 331 LGFIVWGHHMFVSGMN 346
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/85 (38%), Positives = 46/85 (54%)
Frame = +3
Query: 255 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXX 434
PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS G K +
Sbjct: 232 PAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSG-KPIYAKRYILTAFLIAT 288
Query: 435 XXXFIV*AHHIFTVGIDIDTRAYFT 509
F+V HH+F G +I TR +++
Sbjct: 289 IISFVVWMHHMFITGTNIYTRLFYS 313
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 63.3 bits (147), Expect = 5e-09
Identities = 34/87 (39%), Positives = 45/87 (51%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F A GDPIL+QHLF FFGHPEVYI+ +P G++S II ++ F
Sbjct: 242 FFTAASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSIIITFT-QRPIFGYIPIVLSIVA 300
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYFT 509
F + HH+FT G+ +FT
Sbjct: 301 IGFIGFGLWVHHMFTAGLPQLGSNFFT 327
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 63.3 bits (147), Expect = 5e-09
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F SAT+IIAVPTGIKIF LAT+HGTQINY+P++L LG F
Sbjct: 9 FTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVF 50
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 62.9 bits (146), Expect = 6e-09
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F SAT+IIAVPTGIKIF LAT+HGTQINY P++L LG F
Sbjct: 8 FTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVF 49
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 62.5 bits (145), Expect = 8e-09
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +3
Query: 261 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 368
GGGDPIL+QHLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 262 GGGDPILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 62.5 bits (145), Expect = 8e-09
Identities = 36/83 (43%), Positives = 44/83 (53%)
Frame = +3
Query: 231 KLKYIIF*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXX 410
KL ++ PA GG +L+QHLF FFGHPEVY+L LP FGI+S II +K F
Sbjct: 240 KLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII-PVFSRKPMFGYVGL 297
Query: 411 XXXXXXXXXXXFIV*AHHIFTVG 479
V AHH+F G
Sbjct: 298 IFATLSIGALSMAVWAHHMFVTG 320
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/85 (40%), Positives = 44/85 (51%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIF+LH+ ISS + +LPLFV A+ ITA
Sbjct: 139 HSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLL 198
Query: 184 XXXXXAGAITILLTDRNLNTSFFDL 258
+ +T+LL DRN NTSFF++
Sbjct: 199 TLPVLSAGVTMLLLDRNFNTSFFEV 223
Score = 37.9 bits (84), Expect = 0.21
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFG 308
AGGGDPILY+HLF FFG
Sbjct: 224 AGGGDPILYEHLFWFFG 240
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 61.7 bits (143), Expect = 1e-08
Identities = 31/82 (37%), Positives = 43/82 (52%)
Frame = +3
Query: 264 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 443
GGDP+L+QHLF FFGHPEVYI+ LP G++S I+ +
Sbjct: 251 GGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV-PTMARHPLVGYRLIVVALIGTGFFS 309
Query: 444 FIV*AHHIFTVGIDIDTRAYFT 509
F + HH+FT GI + +F+
Sbjct: 310 FGLWVHHMFTTGIPSLSLGFFS 331
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = +3
Query: 261 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXX 440
GGG P+L+QHLF F+ HP VYI++LP G++S ++S +K F
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASL 334
Query: 441 XFIV*AHHIFTVGID 485
FIV HH+FT G++
Sbjct: 335 GFIVWGHHMFTSGMN 349
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/70 (41%), Positives = 36/70 (51%)
Frame = +3
Query: 300 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 479
FFGHPEVY+LILP FGI+SHI F +V AHH+F VG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 480 IDIDTRAYFT 509
D+ T +F+
Sbjct: 61 YDVHTAVFFS 70
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/81 (38%), Positives = 43/81 (53%)
Frame = +3
Query: 264 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 443
GGDP+L+QHLF FFGHPEVYI+ LP G++S I+ +
Sbjct: 310 GGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV-PTMARTPLVGYRFVVLALVGTAFLS 368
Query: 444 FIV*AHHIFTVGIDIDTRAYF 506
F + HH+FT GI + ++F
Sbjct: 369 FGLWVHHMFTTGIPQLSLSFF 389
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/82 (37%), Positives = 45/82 (54%)
Frame = +3
Query: 264 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 443
GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ G K F
Sbjct: 267 GGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVG-KPLFGYGFAVAAVVTMSFLS 325
Query: 444 FIV*AHHIFTVGIDIDTRAYFT 509
F + AHH+F G+ I + + F+
Sbjct: 326 FGLWAHHMFATGLPILSLSLFS 347
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/76 (44%), Positives = 41/76 (53%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVD+AIFSLHLAG+SS + D++PLF+ AV IT
Sbjct: 79 HAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFITTVLLLL 138
Query: 184 XXXXXAGAITILLTDR 231
AGAIT+LLTDR
Sbjct: 139 SLPVLAGAITMLLTDR 154
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/77 (38%), Positives = 42/77 (54%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F PA GGDP+L+Q F F+ HP VY+++LP GI++ + S +K F
Sbjct: 230 FNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS-TFARKPLFGYRQMVWAQMG 288
Query: 429 XXXXXFIV*AHHIFTVG 479
+V AHH+FTVG
Sbjct: 289 IVVLGTMVWAHHMFTVG 305
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 60.5 bits (140), Expect = 3e-08
Identities = 31/87 (35%), Positives = 44/87 (50%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F PA GGDP++YQ++F F+ HP VY+ +LP FG S II ++ F
Sbjct: 176 FNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII-PVFARRPLFGYTSMVFAVWA 234
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYFT 509
F + HH+F G+ TR F+
Sbjct: 235 ITAVSFFLWIHHMFVSGVPNWTRVLFS 261
Score = 37.1 bits (82), Expect = 0.36
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 491 YTSIFYS-ATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
+T + +S T++IAVPTGIKIF + T++ I++ +L LG F
Sbjct: 255 WTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVF 301
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/84 (38%), Positives = 41/84 (48%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G +VDLAIFSLHL+G SS ++ +PLF AV TA
Sbjct: 144 HSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLL 203
Query: 184 XXXXXAGAITILLTDRNLNTSFFD 255
A +T+ + DRN NTSFF+
Sbjct: 204 SLPVLAAGLTMGIFDRNFNTSFFE 227
Score = 41.5 bits (93), Expect = 0.017
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILIL 335
AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 229 AGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/86 (33%), Positives = 42/86 (48%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F PA GGDPI Y HLF F HPEVY+L++P G++ ++ + +K +
Sbjct: 222 FNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMVPR-FSRKPIYSYNSGLFAFVL 280
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYF 506
F AHH+F G+ + F
Sbjct: 281 LTIVGFSSWAHHMFATGMSFTEKTVF 306
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 395
F A GG P+L+Q LF FFGHPEVYILILP G++S ++ + ++E F
Sbjct: 218 FDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL-PKMARREIF 265
Score = 32.7 bits (71), Expect = 7.7
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 509 SATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL 607
+ T+ IA+P+G+K+ AT++G +I Y P IL
Sbjct: 305 ATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTIL 338
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/75 (41%), Positives = 38/75 (50%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 437
A GGD +L+QHLF FGHPEVYI+ LP G IS I+ + E
Sbjct: 239 AEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTELIGYRWVVAAAISLAV 297
Query: 438 XXFIV*AHHIFTVGI 482
F + HH+FT GI
Sbjct: 298 LSFGLWVHHMFTTGI 312
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 56.8 bits (131), Expect = 4e-07
Identities = 30/72 (41%), Positives = 38/72 (52%)
Frame = +3
Query: 264 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 443
GG+ + + ++F FGHPEVYILILP FG+ S I S G K F
Sbjct: 289 GGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG-KVLFGYKSLVWATISIAFLS 347
Query: 444 FIV*AHHIFTVG 479
F+V HH FT+G
Sbjct: 348 FLVWLHHFFTMG 359
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 56.4 bits (130), Expect = 5e-07
Identities = 33/82 (40%), Positives = 41/82 (50%)
Frame = +3
Query: 264 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 443
GG +LY +L +GHPEVYILILP FGI S IIS K F
Sbjct: 264 GGQQMLYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVFSYISLIYATISITVLS 322
Query: 444 FIV*AHHIFTVGIDIDTRAYFT 509
F+V HH FT+G + +F+
Sbjct: 323 FLVWLHHFFTMGSGYLSNIFFS 344
Score = 33.1 bits (72), Expect = 5.9
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 431 WVIRIYCLSSSYIHCRYRY*YTSIFYS-ATIIIAVPTGIKIFR*LATI 571
W+ + + S Y+ ++IF+S +T+IIA+PTG+KIF + TI
Sbjct: 326 WLHHFFTMGSGYL--------SNIFFSISTMIIAIPTGVKIFNWIFTI 365
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 56.4 bits (130), Expect = 5e-07
Identities = 33/87 (37%), Positives = 42/87 (48%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F A GGD +L+QHLF FGHPEVYI+ LP G IS I+ +
Sbjct: 236 FQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTGLLGYGWIVAAAVA 294
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYFT 509
F + HH+FT GI A+F+
Sbjct: 295 LGVLSFGLWVHHMFTTGIPHLGLAFFS 321
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 56.0 bits (129), Expect = 7e-07
Identities = 31/84 (36%), Positives = 41/84 (48%)
Frame = +3
Query: 231 KLKYIIF*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXX 410
KL +F P GG P+LYQ F F+ HP VY+++LP GI + + S +K F
Sbjct: 232 KLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFGYRVM 290
Query: 411 XXXXXXXXXXXFIV*AHHIFTVGI 482
IV HH+F VGI
Sbjct: 291 VYSMLAIVLVSCIVWLHHMFAVGI 314
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQI 586
F +T+I+AVPTG+KIF + T+ G +I
Sbjct: 322 FMISTLIVAVPTGVKIFNLIGTLWGGRI 349
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 56.0 bits (129), Expect = 7e-07
Identities = 29/87 (33%), Positives = 43/87 (49%)
Frame = +3
Query: 249 F*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 428
F P GGDP+L+QHLF FGHPEVYI+ LP + + I+ ++
Sbjct: 262 FDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV-PTAARQPIVGYSWIVLSAVG 320
Query: 429 XXXXXFIV*AHHIFTVGIDIDTRAYFT 509
F + HH+FT G+ + +F+
Sbjct: 321 TGFLSFGLWVHHMFTTGLPALSLGFFS 347
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/82 (35%), Positives = 40/82 (48%)
Frame = +3
Query: 264 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 443
GG+ +LY +LF +GHPEVY ++LP FG IS II +K F
Sbjct: 288 GGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII-PTFAEKPLFGYATMVIATFAIGGIS 346
Query: 444 FIV*AHHIFTVGIDIDTRAYFT 509
+ V HH FT+G +F+
Sbjct: 347 WGVWLHHFFTMGAGPGINIFFS 368
Score = 36.3 bits (80), Expect = 0.63
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +2
Query: 497 SIFYS-ATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
+IF+S AT+++ +PTG+K+F T+ ++ + P +L LG F
Sbjct: 364 NIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALF 408
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 52.0 bits (119), Expect = 1e-05
Identities = 28/74 (37%), Positives = 37/74 (50%)
Frame = +2
Query: 287 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRXKRNFWLFRNNLCYTSNWVIRIYCLSSSY 466
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 467 IHCRYRY*YTSIFY 508
+H R +TSI Y
Sbjct: 61 VHSRNGRSHTSILY 74
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +3
Query: 267 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 446
G +L+ HLF FFGHPEVYI+ P G+++ G++ F
Sbjct: 248 GASLLWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLVALQSF 306
Query: 447 IV*AHHIFTVGIDIDTRAYF 506
+V HH+F GI++ + F
Sbjct: 307 VVWMHHMFLTGINLPIKTIF 326
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +3
Query: 318 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 497
VY++ILP FG++SH + + G + + V AHH+FTVG+D+DTR
Sbjct: 1 VYVIILPVFGLVSHSLHRG-GLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDTR 59
Query: 498 AYFT 509
YF+
Sbjct: 60 VYFS 63
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/83 (33%), Positives = 39/83 (46%)
Frame = +3
Query: 258 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXX 437
A GG P+L+QHLF F HP VY+++LP GI+S + ++
Sbjct: 259 AHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVSDAL-PTFCRRPLVAYEAVAVSTVATML 317
Query: 438 XXFIV*AHHIFTVGIDIDTRAYF 506
F V HH+F GI A+F
Sbjct: 318 IGFEVWVHHMFATGIAPLALAFF 340
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +3
Query: 147 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*PA 260
M C +YS +TC WSYYN IN SKLKYI+F P+
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPS 121
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/67 (40%), Positives = 32/67 (47%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H G SVDLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 138 HSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLL 197
Query: 184 XXXXXAG 204
AG
Sbjct: 198 SLPVLAG 204
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGLYF 628
F SAT+IIA+PTGIK F LAT G I ++P +L LG F
Sbjct: 306 FTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIF 347
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +3
Query: 237 KYI---IF*PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 368
KYI F A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 213 KYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +3
Query: 267 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 446
G +++++LF +FGHPEVY+L+LPG G + +S + +
Sbjct: 255 GGALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS-NLNHRPPYLKKWMIAAMGAISVDSV 313
Query: 447 IV*AHHIFTVGI 482
+V HH F GI
Sbjct: 314 MVFLHHTFMTGI 325
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 40.3 bits (90), Expect = 0.039
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +3
Query: 144 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*PAGGGDP 275
CM C +Y TCFS S+Y IIN K KY IF P P
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSP 140
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 37.1 bits (82), Expect = 0.36
Identities = 24/81 (29%), Positives = 30/81 (37%)
Frame = +3
Query: 267 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 446
G P+ Y F F HPEVY+ ILP F I I+ K+ F
Sbjct: 319 GHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL-PAAAKRPLFARGWAIAGLVGVSMSGA 377
Query: 447 IV*AHHIFTVGIDIDTRAYFT 509
+ HH FT D + T
Sbjct: 378 MSGVHHYFTAVSDARMPIFMT 398
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 37.1 bits (82), Expect = 0.36
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +1
Query: 10 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 189
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 190 XXXAGAITILLTDRNLNT 243
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 36.7 bits (81), Expect = 0.48
Identities = 30/83 (36%), Positives = 34/83 (40%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 183
H +VDL IF LHLAGISS ++ LF
Sbjct: 128 HSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLIL 187
Query: 184 XXXXXAGAITILLTDRNLNTSFF 252
A AIT+L R N SFF
Sbjct: 188 SXPVLAAAITMLXXXRXXNXSFF 210
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 36.7 bits (81), Expect = 0.48
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 127 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDLLEEE 270
DQ+ LF ++ IT AG IT+LL+DRN N FF L+ E
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGE 59
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 36.3 bits (80), Expect = 0.63
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +3
Query: 300 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 479
FFGHP VY + P FG + + I K+ F ++ HH+ T
Sbjct: 2 FFGHPVVYYVPFPLFGALYYYI-PIYAKRSLFSEKWARWNIFLLAIGSMLIWVHHLQTFP 60
Query: 480 IDIDTRAYFT 509
+ +D RA+ T
Sbjct: 61 LPVDLRAWIT 70
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 35.9 bits (79), Expect = 0.83
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 503 FYSATIIIAVPTGIKIFR*LAT 568
F SAT+IIAVPTGIKIF LAT
Sbjct: 8 FTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 264 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 380
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 35.5 bits (78), Expect = 1.1
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +2
Query: 362 YFTRKRXKRNFWLFRNNLCYTSNWVIRIYCLSSS-YIHCRYRY*Y---TSIFYSA-TIII 526
Y K FW +CY N C+ SS + H + T++F+S+ T+II
Sbjct: 21 YVKNKYVSSCFWFLWFVVCYVFNM-----CMGSSVWGHHMFTVGLDVNTAVFFSSVTMII 75
Query: 527 AVPTGIKIFR*LATIHGTQINYNPNIL 607
VPTGIK+F L + +++N IL
Sbjct: 76 RVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 312 PEVYILILPGFGIISHIISQERGKK 386
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 1.9
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 270 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 383
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +1
Query: 4 HEGRSVDLAIFSLHLAGISS 63
H G SVD AIFSLHLAG SS
Sbjct: 33 HGGSSVDFAIFSLHLAGASS 52
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 276 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 383
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.1 bits (72), Expect = 5.9
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 10 GRSVDLAIFSLHLAGISS 63
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 7.7
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 230 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 108
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,617,533
Number of Sequences: 1657284
Number of extensions: 7174425
Number of successful extensions: 16534
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 14461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16217
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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