Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0483
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   1.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.8  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   6.3  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   8.3  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   8.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.3  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 413 TSARDPAFYQLYKRIVQYIIEFKQYQVPYTQ 505
           T+ RDP FY+ +  I     E+K     YT+
Sbjct: 392 TAMRDPIFYRWHSYIDDIFQEYKATLPRYTE 422


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 517 SEEFLCVWYLVLFKFDD 467
           SE+F  +WY +L K  D
Sbjct: 298 SEDFKAIWYSILIKKAD 314


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 490 LVLFKFDDVLNNSFIEL 440
           ++   FDD +NN+ IEL
Sbjct: 194 MITITFDDAINNNNIEL 210


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 57  YLPPFNSFYYPFAQ 98
           Y P F+ FYYP  Q
Sbjct: 99  YEPSFDLFYYPSRQ 112



 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 417  RPGTQPSTSSIKELFNTSSNLNSTRYH 497
            +PG +PSTSS ++    S    ST  H
Sbjct: 1156 KPGHKPSTSSWQKPTKPSYRPPSTTNH 1182


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 33  WYSPLXTGYLPPFNSF 80
           W+SP    Y P  NS+
Sbjct: 71  WHSPRFHAYFPTANSY 86


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 156 DIYEKTFFQYLQQGHFKAFDKKIDLHSSKAVNF 254
           +I +    Q  QQ   +AF K I+  +SKA+ F
Sbjct: 46  EIPQNIIQQQPQQARRRAFVKIIEQPASKALRF 78


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -2

Query: 308 IGGSLLRIDRRSSASSCPKVDCF-ATVQINFF 216
           IGG+  ++ RRS+A+S  ++  F  T+ +  F
Sbjct: 168 IGGTTGKLRRRSTAASRSRLAAFKRTIALGAF 199


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 36  YSPLXTGYLPPFNSFYYPFAQRSNDY 113
           YSP  +   P +N +YY + Q +  Y
Sbjct: 27  YSPPPSYCDPWYNPYYYQYLQNAALY 52


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 433 LLPAL*KNCSIHHRI 477
           L+  L K+C +HHR+
Sbjct: 208 LVMPLCKSCDLHHRL 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,928
Number of Sequences: 336
Number of extensions: 2729
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)