Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0483
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein. 31 0.50
AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein. 31 0.50
AF154122-1|AAF74523.1| 669|Caenorhabditis elegans N-acetylgluco... 31 0.50
AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation... 31 0.50
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical p... 29 2.7
Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical p... 29 2.7
Z47811-4|CAD57701.1| 422|Caenorhabditis elegans Hypothetical pr... 28 4.7
AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical ... 28 4.7
Z83224-1|CAB05720.1| 994|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z79754-14|CAB02102.1| 994|Caenorhabditis elegans Hypothetical p... 27 8.2
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 27 8.2
>AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein.
Length = 669
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +3
Query: 45 LXTGYLPPFNSFYYPFAQRSNDYELHTEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAF 212
+ + ++ P FYY + S Y +EKN Y+ + F + E+ F Q F
Sbjct: 13 IFSAFITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRF 72
Query: 213 DKKIDLHSSKAVN--FWATTGRRT 278
+++ + +N W G +T
Sbjct: 73 PSNVEIEYPECLNKMKWIKNGWKT 96
>AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein.
Length = 661
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +3
Query: 45 LXTGYLPPFNSFYYPFAQRSNDYELHTEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAF 212
+ + ++ P FYY + S Y +EKN Y+ + F + E+ F Q F
Sbjct: 5 IFSAFITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRF 64
Query: 213 DKKIDLHSSKAVN--FWATTGRRT 278
+++ + +N W G +T
Sbjct: 65 PSNVEIEYPECLNKMKWIKNGWKT 88
>AF154122-1|AAF74523.1| 669|Caenorhabditis elegans
N-acetylglucosaminyltransferase V protein.
Length = 669
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +3
Query: 45 LXTGYLPPFNSFYYPFAQRSNDYELHTEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAF 212
+ + ++ P FYY + S Y +EKN Y+ + F + E+ F Q F
Sbjct: 13 IFSAFITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRF 72
Query: 213 DKKIDLHSSKAVN--FWATTGRRT 278
+++ + +N W G +T
Sbjct: 73 PSNVEIEYPECLNKMKWIKNGWKT 96
>AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation
related protein 2 protein.
Length = 669
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +3
Query: 45 LXTGYLPPFNSFYYPFAQRSNDYELHTEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAF 212
+ + ++ P FYY + S Y +EKN Y+ + F + E+ F Q F
Sbjct: 13 IFSAFITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRF 72
Query: 213 DKKIDLHSSKAVN--FWATTGRRT 278
+++ + +N W G +T
Sbjct: 73 PSNVEIEYPECLNKMKWIKNGWKT 96
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 88 HLPKEAMTTSCTPRRTTKKFASSTFMRRHSSNTSS 192
H PK ++ TP+ +T++ SST RR S + SS
Sbjct: 335 HNPKSSVPYRGTPQYSTRRRLSSTITRRRSMSQSS 369
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 88 HLPKEAMTTSCTPRRTTKKFASSTFMRRHSSNTSS 192
H PK ++ TP+ +T++ SST RR S + SS
Sbjct: 335 HNPKSSVPYRGTPQYSTRRRLSSTITRRRSMSQSS 369
>Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical
protein R74.1 protein.
Length = 1186
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 90 FAQRSNDYELHTEKNYEEIRFLDIYEKTFFQY 185
FA N TE+NYE F D + FF+Y
Sbjct: 800 FANEMNSLIAATEQNYEATNFKDALKTGFFEY 831
>Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical
protein R74.1 protein.
Length = 1186
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 90 FAQRSNDYELHTEKNYEEIRFLDIYEKTFFQY 185
FA N TE+NYE F D + FF+Y
Sbjct: 800 FANEMNSLIAATEQNYEATNFKDALKTGFFEY 831
>Z47811-4|CAD57701.1| 422|Caenorhabditis elegans Hypothetical
protein K02C4.5 protein.
Length = 422
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 423 GTQPSTSSIKELFNT-SSNLNSTRYHTHKNSSLRWSENFRRSKSTKWSHSLTISTSM 590
GT + FN+ S+LNST++ +NS RW KS S S+S+
Sbjct: 107 GTVIEKPKRRHFFNSIHSHLNSTKHSETENSGRRWFPKLPERKSELRSSRKNTSSSL 163
>AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical
protein Y55F3BL.2 protein.
Length = 462
Score = 28.3 bits (60), Expect = 4.7
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = +3
Query: 72 NSFYYPFAQRSNDYELH-----TEKNYEEIRFLDI-YEKTFFQYLQQGHFKAFDKKIDLH 233
N F++ F+ + ++ ++ ++K E I F + EKT F + +Q +FK F++K
Sbjct: 18 NCFFFQFSAKYLEFSVNFPRKNSKKKLETIIFYEKNVEKTLF-FTKQ-YFKFFNEKFQFF 75
Query: 234 SSKAVNFWATTGRRTPIYSKKTSSNS 311
S+ + + TG++ P++ S+ S
Sbjct: 76 SNLSNKKFKNTGKK-PVFFSNFSNKS 100
>Z83224-1|CAB05720.1| 994|Caenorhabditis elegans Hypothetical protein
F25H2.13 protein.
Length = 994
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 432 PSTSSIKELFNTSSNLNSTRYHTHKNSSLRWSENFRR 542
P++ +K++ + + +T ++K S+RW E F+R
Sbjct: 919 PTSELLKDMSDDNKKQFATTLRSYKAESIRWDEVFQR 955
>Z79754-14|CAB02102.1| 994|Caenorhabditis elegans Hypothetical
protein F25H2.13 protein.
Length = 994
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 432 PSTSSIKELFNTSSNLNSTRYHTHKNSSLRWSENFRR 542
P++ +K++ + + +T ++K S+RW E F+R
Sbjct: 919 PTSELLKDMSDDNKKQFATTLRSYKAESIRWDEVFQR 955
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 417 RPGTQPSTSSIKELFNTSSNLNSTRYHTHKNSS 515
R TQPST++ K N SSN + +H+H ++S
Sbjct: 659 RAPTQPSTTTTKS--NGSSNHHHHHHHSHHHAS 689
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,558,713
Number of Sequences: 27780
Number of extensions: 265486
Number of successful extensions: 1006
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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