Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0482
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    27   0.13 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.2  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   6.3  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   8.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.3  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 395 NIFTTIL*NVPGFII-FRCDINSLPYF 472
           ++   IL  V GFI  F CDINS+ YF
Sbjct: 359 SLLNDILFPVAGFISDFDCDINSIQYF 385


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 29  NLTKNSCRSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
           NL+K        P  GP  + +  R  ++DDS+  P N
Sbjct: 225 NLSKPGTPPSGEPGNGPLDLSVSSRKRSNDDSVSQPPN 262


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 389 ERCVTQTLRALRKNPINGYQL 327
           ERC+ +TLR     PI   QL
Sbjct: 49  ERCLMETLRMFPPVPIIARQL 69


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 391 YQYFYHDSLKRSGF 432
           +Q+ +HD L+R GF
Sbjct: 131 HQFPHHDFLEREGF 144


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 32  LTKNSCRSQPVPYPGPG 82
           LTK +   Q VP  GPG
Sbjct: 876 LTKGNNHDQGVPSAGPG 892


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 373 CVTHRSYQYFYHDSLKRSGFHY 438
           C  H    + YH ++  SG H+
Sbjct: 155 CPIHPGMTFRYHFNVHNSGTHF 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,047
Number of Sequences: 336
Number of extensions: 3771
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)