BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= prgv0482 (618 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC014453-1|AAH14453.1| 518|Homo sapiens beta-site APP-cleaving ... 32 1.4 AY769996-1|AAX14808.1| 47|Homo sapiens BACE2 protein. 32 1.4 AY358927-1|AAQ89286.1| 518|Homo sapiens BACE2 protein. 32 1.4 AL163284-2|CAB90458.1| 105|Homo sapiens beta-site APP-cleaving ... 32 1.4 AF204944-1|AAF26368.1| 518|Homo sapiens transmembrane aspartic ... 32 1.4 AF200342-1|AAF17078.1| 518|Homo sapiens aspartyl protease 1 pro... 32 1.4 AF200192-1|AAF13714.1| 518|Homo sapiens memapsin 1 protein. 32 1.4 AF188277-1|AAF35836.1| 396|Homo sapiens aspartyl protease protein. 32 1.4 AF188276-1|AAF35835.1| 468|Homo sapiens aspartyl protease protein. 32 1.4 AF178532-1|AAF29494.1| 518|Homo sapiens aspartyl protease protein. 32 1.4 AF117892-1|AAD45240.1| 518|Homo sapiens aspartic-like protease ... 32 1.4 AF050171-1|AAD45963.1| 518|Homo sapiens aspartyl protease protein. 32 1.4 BC042555-1|AAH42555.1| 917|Homo sapiens regulator of G-protein ... 32 1.9 AL359455-4|CAH73880.1| 602|Homo sapiens regulator of G-protein ... 32 1.9 AL359455-3|CAH73879.1| 1094|Homo sapiens regulator of G-protein ... 32 1.9 AL359455-1|CAH73877.1| 917|Homo sapiens regulator of G-protein ... 32 1.9 AL162727-4|CAH70843.1| 1094|Homo sapiens regulator of G-protein ... 32 1.9 AL162727-2|CAH70841.1| 917|Homo sapiens regulator of G-protein ... 32 1.9 AL137066-8|CAH70103.1| 602|Homo sapiens regulator of G-protein ... 32 1.9 AL137066-7|CAH70102.1| 1094|Homo sapiens regulator of G-protein ... 32 1.9 AK222888-1|BAD96608.1| 415|Homo sapiens Hypothetical protein FL... 32 1.9 AK128127-1|BAC87285.1| 1198|Homo sapiens protein ( Homo sapiens ... 32 1.9 AK074977-1|BAC11328.1| 602|Homo sapiens protein ( Homo sapiens ... 32 1.9 AF490840-1|AAM33255.1| 917|Homo sapiens RGS3 isoform PDZ-RGS3 p... 32 1.9 AF490839-1|AAM33254.1| 1093|Homo sapiens RGS3 isoform C2PA-RGS3 ... 32 1.9 AF463495-1|AAL68829.1| 917|Homo sapiens PDZ-RGS3 protein. 32 1.9 AL359455-2|CAH73878.1| 340|Homo sapiens regulator of G-protein ... 31 3.3 AK000377-1|BAA91125.1| 340|Homo sapiens protein ( Homo sapiens ... 31 3.3 >BC014453-1|AAH14453.1| 518|Homo sapiens beta-site APP-cleaving enzyme 2 protein. Length = 518 Score = 32.3 bits (70), Expect = 1.4 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140 +P+ + + AP + PAP TL LRV+ T+RV Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42 >AY769996-1|AAX14808.1| 47|Homo sapiens BACE2 protein. Length = 47 Score = 32.3 bits (70), Expect = 1.4 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140 +P+ + + AP + PAP TL LRV+ T+RV Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42 >AY358927-1|AAQ89286.1| 518|Homo sapiens BACE2 protein. Length = 518 Score = 32.3 bits (70), Expect = 1.4 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140 +P+ + + AP + PAP TL LRV+ T+RV Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42 >AL163284-2|CAB90458.1| 105|Homo sapiens beta-site APP-cleaving enzyme 2, EC 3.4.23. protein. Length = 105 Score = 32.3 bits (70), Expect = 1.4 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140 +P+ + + AP + PAP TL LRV+ T+RV Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42 >AF204944-1|AAF26368.1| 518|Homo sapiens transmembrane aspartic proteinase Asp 1 protein. Length = 518 Score = 32.3 bits (70), Expect = 1.4 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140 +P+ + + AP + PAP TL LRV+ T+RV Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42 >AF200342-1|AAF17078.1| 518|Homo sapiens aspartyl protease 1 protein. Length = 518 Score = 32.3 bits (70), Expect = 1.4 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140 +P+ + + AP + PAP TL LRV+ T+RV Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42 >AF200192-1|AAF13714.1| 518|Homo sapiens memapsin 1 protein. Length = 518 Score = 32.3 bits (70), Expect = 1.4 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140 +P+ + + AP + PAP TL LRV+ T+RV Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVTAATNRV 42 >AF188277-1|AAF35836.1| 396|Homo sapiens aspartyl protease protein. Length = 396 Score = 32.3 bits (70), Expect = 1.4 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140 +P+ + + AP + PAP TL LRV+ T+RV Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42 >AF188276-1|AAF35835.1| 468|Homo sapiens aspartyl protease protein. Length = 468 Score = 32.3 bits (70), Expect = 1.4 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140 +P+ + + AP + PAP TL LRV+ T+RV Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42 >AF178532-1|AAF29494.1| 518|Homo sapiens aspartyl protease protein. Length = 518 Score = 32.3 bits (70), Expect = 1.4 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140 +P+ + + AP + PAP TL LRV+ T+RV Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42 >AF117892-1|AAD45240.1| 518|Homo sapiens aspartic-like protease protein. Length = 518 Score = 32.3 bits (70), Expect = 1.4 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140 +P+ + + AP + PAP TL LRV+ T+RV Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42 >AF050171-1|AAD45963.1| 518|Homo sapiens aspartyl protease protein. Length = 518 Score = 32.3 bits (70), Expect = 1.4 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -3 Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140 +P+ + + AP + PAP TL LRV+ T+RV Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42 >BC042555-1|AAH42555.1| 917|Homo sapiens regulator of G-protein signaling 3 protein. Length = 917 Score = 31.9 bits (69), Expect = 1.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142 R P PGP G L+R +C S LQSP N Sbjct: 93 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 123 >AL359455-4|CAH73880.1| 602|Homo sapiens regulator of G-protein signalling 3 protein. Length = 602 Score = 31.9 bits (69), Expect = 1.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142 R P PGP G L+R +C S LQSP N Sbjct: 262 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 292 >AL359455-3|CAH73879.1| 1094|Homo sapiens regulator of G-protein signalling 3 protein. Length = 1094 Score = 31.9 bits (69), Expect = 1.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142 R P PGP G L+R +C S LQSP N Sbjct: 270 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 300 >AL359455-1|CAH73877.1| 917|Homo sapiens regulator of G-protein signalling 3 protein. Length = 917 Score = 31.9 bits (69), Expect = 1.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142 R P PGP G L+R +C S LQSP N Sbjct: 93 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 123 >AL162727-4|CAH70843.1| 1094|Homo sapiens regulator of G-protein signalling 3 protein. Length = 1094 Score = 31.9 bits (69), Expect = 1.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142 R P PGP G L+R +C S LQSP N Sbjct: 270 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 300 >AL162727-2|CAH70841.1| 917|Homo sapiens regulator of G-protein signalling 3 protein. Length = 917 Score = 31.9 bits (69), Expect = 1.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142 R P PGP G L+R +C S LQSP N Sbjct: 93 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 123 >AL137066-8|CAH70103.1| 602|Homo sapiens regulator of G-protein signalling 3 protein. Length = 602 Score = 31.9 bits (69), Expect = 1.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142 R P PGP G L+R +C S LQSP N Sbjct: 262 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 292 >AL137066-7|CAH70102.1| 1094|Homo sapiens regulator of G-protein signalling 3 protein. Length = 1094 Score = 31.9 bits (69), Expect = 1.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142 R P PGP G L+R +C S LQSP N Sbjct: 270 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 300 >AK222888-1|BAD96608.1| 415|Homo sapiens Hypothetical protein FLJ90496 variant protein. Length = 415 Score = 31.9 bits (69), Expect = 1.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142 R P PGP G L+R +C S LQSP N Sbjct: 75 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 105 >AK128127-1|BAC87285.1| 1198|Homo sapiens protein ( Homo sapiens cDNA FLJ46248 fis, clone TESTI4021197, highly similar to Regulator of G-protein signaling 3. ). Length = 1198 Score = 31.9 bits (69), Expect = 1.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142 R P PGP G L+R +C S LQSP N Sbjct: 374 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 404 >AK074977-1|BAC11328.1| 602|Homo sapiens protein ( Homo sapiens cDNA FLJ90496 fis, clone NT2RP3003849, weakly similar to PROTEIN KINASE C, BRAIN ISOZYME (EC 2.7.1.-). ). Length = 602 Score = 31.9 bits (69), Expect = 1.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142 R P PGP G L+R +C S LQSP N Sbjct: 262 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 292 >AF490840-1|AAM33255.1| 917|Homo sapiens RGS3 isoform PDZ-RGS3 protein. Length = 917 Score = 31.9 bits (69), Expect = 1.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142 R P PGP G L+R +C S LQSP N Sbjct: 93 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 123 >AF490839-1|AAM33254.1| 1093|Homo sapiens RGS3 isoform C2PA-RGS3 protein. Length = 1093 Score = 31.9 bits (69), Expect = 1.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142 R P PGP G L+R +C S LQSP N Sbjct: 270 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 300 >AF463495-1|AAL68829.1| 917|Homo sapiens PDZ-RGS3 protein. Length = 917 Score = 31.9 bits (69), Expect = 1.9 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142 R P PGP G L+R +C S LQSP N Sbjct: 93 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 123 >AL359455-2|CAH73878.1| 340|Homo sapiens regulator of G-protein signalling 3 protein. Length = 340 Score = 31.1 bits (67), Expect = 3.3 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +2 Query: 59 PVPYPGPGGICLKRRACASDDSLQSPAN 142 P PGP G L+R +C S LQSP N Sbjct: 3 PQVKPGPDGGVLRRASCKSTHDLQSPPN 30 >AK000377-1|BAA91125.1| 340|Homo sapiens protein ( Homo sapiens cDNA FLJ20370 fis, clone HEP19443. ). Length = 340 Score = 31.1 bits (67), Expect = 3.3 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +2 Query: 59 PVPYPGPGGICLKRRACASDDSLQSPAN 142 P PGP G L+R +C S LQSP N Sbjct: 3 PQVKPGPDGGVLRRASCKSTHDLQSPPN 30 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 97,743,378 Number of Sequences: 237096 Number of extensions: 2288966 Number of successful extensions: 3143 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3084 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3143 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 6635341780 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -