BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0482
(618 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC014453-1|AAH14453.1| 518|Homo sapiens beta-site APP-cleaving ... 32 1.4
AY769996-1|AAX14808.1| 47|Homo sapiens BACE2 protein. 32 1.4
AY358927-1|AAQ89286.1| 518|Homo sapiens BACE2 protein. 32 1.4
AL163284-2|CAB90458.1| 105|Homo sapiens beta-site APP-cleaving ... 32 1.4
AF204944-1|AAF26368.1| 518|Homo sapiens transmembrane aspartic ... 32 1.4
AF200342-1|AAF17078.1| 518|Homo sapiens aspartyl protease 1 pro... 32 1.4
AF200192-1|AAF13714.1| 518|Homo sapiens memapsin 1 protein. 32 1.4
AF188277-1|AAF35836.1| 396|Homo sapiens aspartyl protease protein. 32 1.4
AF188276-1|AAF35835.1| 468|Homo sapiens aspartyl protease protein. 32 1.4
AF178532-1|AAF29494.1| 518|Homo sapiens aspartyl protease protein. 32 1.4
AF117892-1|AAD45240.1| 518|Homo sapiens aspartic-like protease ... 32 1.4
AF050171-1|AAD45963.1| 518|Homo sapiens aspartyl protease protein. 32 1.4
BC042555-1|AAH42555.1| 917|Homo sapiens regulator of G-protein ... 32 1.9
AL359455-4|CAH73880.1| 602|Homo sapiens regulator of G-protein ... 32 1.9
AL359455-3|CAH73879.1| 1094|Homo sapiens regulator of G-protein ... 32 1.9
AL359455-1|CAH73877.1| 917|Homo sapiens regulator of G-protein ... 32 1.9
AL162727-4|CAH70843.1| 1094|Homo sapiens regulator of G-protein ... 32 1.9
AL162727-2|CAH70841.1| 917|Homo sapiens regulator of G-protein ... 32 1.9
AL137066-8|CAH70103.1| 602|Homo sapiens regulator of G-protein ... 32 1.9
AL137066-7|CAH70102.1| 1094|Homo sapiens regulator of G-protein ... 32 1.9
AK222888-1|BAD96608.1| 415|Homo sapiens Hypothetical protein FL... 32 1.9
AK128127-1|BAC87285.1| 1198|Homo sapiens protein ( Homo sapiens ... 32 1.9
AK074977-1|BAC11328.1| 602|Homo sapiens protein ( Homo sapiens ... 32 1.9
AF490840-1|AAM33255.1| 917|Homo sapiens RGS3 isoform PDZ-RGS3 p... 32 1.9
AF490839-1|AAM33254.1| 1093|Homo sapiens RGS3 isoform C2PA-RGS3 ... 32 1.9
AF463495-1|AAL68829.1| 917|Homo sapiens PDZ-RGS3 protein. 32 1.9
AL359455-2|CAH73878.1| 340|Homo sapiens regulator of G-protein ... 31 3.3
AK000377-1|BAA91125.1| 340|Homo sapiens protein ( Homo sapiens ... 31 3.3
>BC014453-1|AAH14453.1| 518|Homo sapiens beta-site APP-cleaving
enzyme 2 protein.
Length = 518
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140
+P+ + + AP + PAP TL LRV+ T+RV
Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42
>AY769996-1|AAX14808.1| 47|Homo sapiens BACE2 protein.
Length = 47
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140
+P+ + + AP + PAP TL LRV+ T+RV
Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42
>AY358927-1|AAQ89286.1| 518|Homo sapiens BACE2 protein.
Length = 518
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140
+P+ + + AP + PAP TL LRV+ T+RV
Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42
>AL163284-2|CAB90458.1| 105|Homo sapiens beta-site APP-cleaving
enzyme 2, EC 3.4.23. protein.
Length = 105
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140
+P+ + + AP + PAP TL LRV+ T+RV
Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42
>AF204944-1|AAF26368.1| 518|Homo sapiens transmembrane aspartic
proteinase Asp 1 protein.
Length = 518
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140
+P+ + + AP + PAP TL LRV+ T+RV
Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42
>AF200342-1|AAF17078.1| 518|Homo sapiens aspartyl protease 1
protein.
Length = 518
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140
+P+ + + AP + PAP TL LRV+ T+RV
Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42
>AF200192-1|AAF13714.1| 518|Homo sapiens memapsin 1 protein.
Length = 518
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140
+P+ + + AP + PAP TL LRV+ T+RV
Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVTAATNRV 42
>AF188277-1|AAF35836.1| 396|Homo sapiens aspartyl protease protein.
Length = 396
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140
+P+ + + AP + PAP TL LRV+ T+RV
Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42
>AF188276-1|AAF35835.1| 468|Homo sapiens aspartyl protease protein.
Length = 468
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140
+P+ + + AP + PAP TL LRV+ T+RV
Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42
>AF178532-1|AAF29494.1| 518|Homo sapiens aspartyl protease protein.
Length = 518
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140
+P+ + + AP + PAP TL LRV+ T+RV
Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42
>AF117892-1|AAD45240.1| 518|Homo sapiens aspartic-like protease
protein.
Length = 518
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140
+P+ + + AP + PAP TL LRV+ T+RV
Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42
>AF050171-1|AAD45963.1| 518|Homo sapiens aspartyl protease protein.
Length = 518
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 238 IPI*GDCVTKLAPNVGPAPTTLRLRVSCCTDRV 140
+P+ + + AP + PAP TL LRV+ T+RV
Sbjct: 10 LPLLAQWLLRAAPELAPAPFTLPLRVAAATNRV 42
>BC042555-1|AAH42555.1| 917|Homo sapiens regulator of G-protein
signaling 3 protein.
Length = 917
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
R P PGP G L+R +C S LQSP N
Sbjct: 93 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 123
>AL359455-4|CAH73880.1| 602|Homo sapiens regulator of G-protein
signalling 3 protein.
Length = 602
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
R P PGP G L+R +C S LQSP N
Sbjct: 262 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 292
>AL359455-3|CAH73879.1| 1094|Homo sapiens regulator of G-protein
signalling 3 protein.
Length = 1094
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
R P PGP G L+R +C S LQSP N
Sbjct: 270 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 300
>AL359455-1|CAH73877.1| 917|Homo sapiens regulator of G-protein
signalling 3 protein.
Length = 917
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
R P PGP G L+R +C S LQSP N
Sbjct: 93 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 123
>AL162727-4|CAH70843.1| 1094|Homo sapiens regulator of G-protein
signalling 3 protein.
Length = 1094
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
R P PGP G L+R +C S LQSP N
Sbjct: 270 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 300
>AL162727-2|CAH70841.1| 917|Homo sapiens regulator of G-protein
signalling 3 protein.
Length = 917
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
R P PGP G L+R +C S LQSP N
Sbjct: 93 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 123
>AL137066-8|CAH70103.1| 602|Homo sapiens regulator of G-protein
signalling 3 protein.
Length = 602
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
R P PGP G L+R +C S LQSP N
Sbjct: 262 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 292
>AL137066-7|CAH70102.1| 1094|Homo sapiens regulator of G-protein
signalling 3 protein.
Length = 1094
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
R P PGP G L+R +C S LQSP N
Sbjct: 270 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 300
>AK222888-1|BAD96608.1| 415|Homo sapiens Hypothetical protein
FLJ90496 variant protein.
Length = 415
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
R P PGP G L+R +C S LQSP N
Sbjct: 75 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 105
>AK128127-1|BAC87285.1| 1198|Homo sapiens protein ( Homo sapiens
cDNA FLJ46248 fis, clone TESTI4021197, highly similar
to Regulator of G-protein signaling 3. ).
Length = 1198
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
R P PGP G L+R +C S LQSP N
Sbjct: 374 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 404
>AK074977-1|BAC11328.1| 602|Homo sapiens protein ( Homo sapiens
cDNA FLJ90496 fis, clone NT2RP3003849, weakly similar to
PROTEIN KINASE C, BRAIN ISOZYME (EC 2.7.1.-). ).
Length = 602
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
R P PGP G L+R +C S LQSP N
Sbjct: 262 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 292
>AF490840-1|AAM33255.1| 917|Homo sapiens RGS3 isoform PDZ-RGS3
protein.
Length = 917
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
R P PGP G L+R +C S LQSP N
Sbjct: 93 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 123
>AF490839-1|AAM33254.1| 1093|Homo sapiens RGS3 isoform C2PA-RGS3
protein.
Length = 1093
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
R P PGP G L+R +C S LQSP N
Sbjct: 270 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 300
>AF463495-1|AAL68829.1| 917|Homo sapiens PDZ-RGS3 protein.
Length = 917
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 50 RSQPVPYPGPGGICLKRRACASDDSLQSPAN 142
R P PGP G L+R +C S LQSP N
Sbjct: 93 RMVPQVKPGPDGGVLRRASCKSTHDLQSPPN 123
>AL359455-2|CAH73878.1| 340|Homo sapiens regulator of G-protein
signalling 3 protein.
Length = 340
Score = 31.1 bits (67), Expect = 3.3
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 59 PVPYPGPGGICLKRRACASDDSLQSPAN 142
P PGP G L+R +C S LQSP N
Sbjct: 3 PQVKPGPDGGVLRRASCKSTHDLQSPPN 30
>AK000377-1|BAA91125.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ20370 fis, clone HEP19443. ).
Length = 340
Score = 31.1 bits (67), Expect = 3.3
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 59 PVPYPGPGGICLKRRACASDDSLQSPAN 142
P PGP G L+R +C S LQSP N
Sbjct: 3 PQVKPGPDGGVLRRASCKSTHDLQSPPN 30
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,743,378
Number of Sequences: 237096
Number of extensions: 2288966
Number of successful extensions: 3143
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3143
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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