Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0478
         (701 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin pro...    97   1e-20
AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin (...    97   1e-20
Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical pr...    34   0.11 
AC024792-6|AAF60686.2|  901|Caenorhabditis elegans Hypothetical ...    33   0.26 
AF038609-2|AAK29794.1|  226|Caenorhabditis elegans Hypothetical ...    31   0.80 
AC006603-7|ABB51201.1|  576|Caenorhabditis elegans Hypothetical ...    28   5.6  
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U97009-10|AAC69033.1|  533|Caenorhabditis elegans Udp-glucuronos...    28   7.4  
AF038609-1|AAO61425.1|  234|Caenorhabditis elegans Hypothetical ...    28   7.4  

>L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin
           protein.
          Length = 264

 Score = 97.1 bits (231), Expect = 1e-20
 Identities = 38/73 (52%), Positives = 55/73 (75%)
 Frame = +1

Query: 4   HEAIWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDADDDHRVTLAEWGK 183
           +  IWK+C+LD + +D+ VS HEL PI AP++ +E CI PFL+ CDA++D  +++ EWGK
Sbjct: 192 YPVIWKFCELDTKPHDKSVSHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGK 251

Query: 184 CLELDELEMEERC 222
           CL L E E++ERC
Sbjct: 252 CLGLKEGEIQERC 264


>AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin
           (sparc) related protein1 protein.
          Length = 264

 Score = 97.1 bits (231), Expect = 1e-20
 Identities = 38/73 (52%), Positives = 55/73 (75%)
 Frame = +1

Query: 4   HEAIWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDADDDHRVTLAEWGK 183
           +  IWK+C+LD + +D+ VS HEL PI AP++ +E CI PFL+ CDA++D  +++ EWGK
Sbjct: 192 YPVIWKFCELDTKPHDKSVSHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGK 251

Query: 184 CLELDELEMEERC 222
           CL L E E++ERC
Sbjct: 252 CLGLKEGEIQERC 264


>Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical
           protein T04F3.2 protein.
          Length = 260

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = +1

Query: 1   RHEAI-WKWCDLDAQTNDRFVSRHELFPIRAPLMA---LEHCIAPFLDRCDADDDHRVTL 168
           R  AI WK+  L+   N+  + R E  P ++ L+    +  C       CD + D ++T 
Sbjct: 170 RDSAIRWKFNQLNINHNN-VLERSEWKPFKSVLLEWKNVRQCSRNLFKTCDLNKDRKLTF 228

Query: 169 AEWGKCL 189
            EW KC+
Sbjct: 229 DEWRKCI 235


>AC024792-6|AAF60686.2|  901|Caenorhabditis elegans Hypothetical
           protein Y48G1A.1 protein.
          Length = 901

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = -2

Query: 607 NFFNLFVSCEYFND*IFFLTCAVINFHI*FSLYIFYSKDKVIIKSLLQNR 458
           NF++  +  E FND +  L   +  F + F   +FYS ++ +++ LLQ +
Sbjct: 533 NFYDYHLMDEMFNDSMHILMETITEFTLPFLYELFYSFEEKVLEGLLQRK 582


>AF038609-2|AAK29794.1|  226|Caenorhabditis elegans Hypothetical
           protein C54E4.2a protein.
          Length = 226

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
 Frame = +1

Query: 1   RHEAIWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRC-DADDDHRVTLAEW 177
           R E  W +   D   + + +S+ EL PI       E C+  F+D C D   D  +++ EW
Sbjct: 78  RVEVGWMFNQWDGNQDGK-LSKAELRPIERG--GNEACVEEFIDMCDDMVVDGSISVDEW 134

Query: 178 GKCLEL-DELEMEERC 222
             C    D+L  E  C
Sbjct: 135 CDCFTFSDDLRHEPPC 150


>AC006603-7|ABB51201.1|  576|Caenorhabditis elegans Hypothetical
           protein B0524.7 protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 190 ELDELEMEERCDDFNENAE 246
           E+++LE E RC   NENAE
Sbjct: 193 EIEKLETEMRCQKMNENAE 211


>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
            C14C10.5 protein.
          Length = 1908

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -3

Query: 90   SSNGEQLVTGHESIIGLSVQIAPFPYSL 7
            +++ +  + GH  ++GLS  +  FPYS+
Sbjct: 1814 AAHSKDQIQGHAGVLGLSAIVLAFPYSV 1841


>U97009-10|AAC69033.1|  533|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein11 protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 270 HHWRTKIVFSVFIEIVAALLHFQLV 196
           H++   IVF +F+ I+ A + FQ+V
Sbjct: 494 HYYLDVIVFLIFVSIITAYISFQIV 518


>AF038609-1|AAO61425.1|  234|Caenorhabditis elegans Hypothetical
           protein C54E4.2b protein.
          Length = 234

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +1

Query: 106 EHCIAPFLDRC-DADDDHRVTLAEWGKCLEL-DELEMEERC 222
           E C+  F+D C D   D  +++ EW  C    D+L  E  C
Sbjct: 118 EACVEEFIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEPPC 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,607,146
Number of Sequences: 27780
Number of extensions: 247288
Number of successful extensions: 474
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)