Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0477
         (697 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5K721 Cluster: Putative uncharacterized protein; n=1; ...    34   3.8  
UniRef50_A6QSA9 Cluster: Predicted protein; n=1; Ajellomyces cap...    33   5.1  

>UniRef50_A5K721 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1061

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = -3

Query: 245 RRPQCRIECASEILEILKTYLITDLSCKTTREVILTNTINFVLLFYTFKRAILVCTYI*S 66
           RRP+    C + + +I K Y+  DL     RE    +  N V+ FY  K+ + +C++   
Sbjct: 238 RRPRKSAFCHTVVKQIEKNYMYEDL-LNLYREK--RHLANIVVCFYILKQLVKICSFE-K 293

Query: 65  ESRKRLQRFS*NLVY 21
           ES   L  F  N+++
Sbjct: 294 ESESGLSAFQKNVIH 308


>UniRef50_A6QSA9 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 516

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -2

Query: 450 PIRRFIVALLRLTSALNLINNFYPNMKQTIIHSHKIINLLKFHFRL 313
           P+R   +A L LTS L L++      +Q I+HSH    +L F F+L
Sbjct: 48  PLRWDAIANLTLTSMLQLLDFSLKVAEQLILHSHLCTQVLHFFFQL 93


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,198,737
Number of Sequences: 1657284
Number of extensions: 11148774
Number of successful extensions: 23002
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22993
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)