Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0477
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   7.0  
EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.     23   9.2  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 492 FLLQRQCFSKYDRVPIRRFIVALLRLTSALNLINNFY 382
           +L+Q + +S    + I  F    LRL+S   L++ FY
Sbjct: 287 YLVQYEKYSPLFVIKISLFRTVFLRLSSLAVLLSRFY 323


>EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 215 SEILEILKTYLITDLSCKTTREVILTNTINFVLLFYT 105
           SE  ++L   L+ DL CK      L  + NF   FYT
Sbjct: 101 SETKKVLDRMLL-DLICKECLPFNLVESENFKKFFYT 136


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,889
Number of Sequences: 2352
Number of extensions: 13174
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)