Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0476
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    25   2.3  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   9.2  

>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 610 KLC*PMYFYSAIICKIGTRLIFN 678
           K+  P+YF  A +C+ GT+ ++N
Sbjct: 201 KIVQPVYFKDAKLCQNGTKSMYN 223


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 228 NCHASKLKILMILFTVQQ 175
           NCH+++ + L+ +FT  Q
Sbjct: 172 NCHSNRAEFLIAIFTTVQ 189


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,200
Number of Sequences: 2352
Number of extensions: 10991
Number of successful extensions: 44
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)