Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0473
         (691 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111559-1|AAI11560.1|  865|Homo sapiens LINE-1 type transposase...    31   2.9  
AL162739-7|CAI19299.1|  865|Homo sapiens novel protein (FLJ10884...    31   2.9  
AK001973-1|BAA92011.1|  865|Homo sapiens protein ( Homo sapiens ...    31   2.9  
AK001746-1|BAA91878.1|  440|Homo sapiens protein ( Homo sapiens ...    31   2.9  
AB211065-1|BAD95492.1|  865|Homo sapiens ES cell associated tran...    31   2.9  

>BC111559-1|AAI11560.1|  865|Homo sapiens LINE-1 type transposase
           domain containing 1 protein.
          Length = 865

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 18/71 (25%), Positives = 34/71 (47%)
 Frame = +3

Query: 81  LKIEEIARKNGDTDKAISNSNPGNAIPSGTTNRGNVTSNVETTILDLRRKDNTNNTXPXR 260
           L++ E++ K  +T++   NSN G  +P G +    V  ++E T+ ++  +D   N     
Sbjct: 137 LEVNELSGKLDNTNEY--NSNDGKKLPQGESRSYEVMGSMEETLCNIDDRDGNRNVHLEF 194

Query: 261 L*RTHRYSGRE 293
             R  R  G +
Sbjct: 195 TERESRKDGED 205


>AL162739-7|CAI19299.1|  865|Homo sapiens novel protein (FLJ10884)
           protein.
          Length = 865

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 18/71 (25%), Positives = 34/71 (47%)
 Frame = +3

Query: 81  LKIEEIARKNGDTDKAISNSNPGNAIPSGTTNRGNVTSNVETTILDLRRKDNTNNTXPXR 260
           L++ E++ K  +T++   NSN G  +P G +    V  ++E T+ ++  +D   N     
Sbjct: 137 LEVNELSGKLDNTNEY--NSNDGKKLPQGESRSYEVMGSMEETLCNIDDRDGNRNVHLEF 194

Query: 261 L*RTHRYSGRE 293
             R  R  G +
Sbjct: 195 TERESRKDGED 205


>AK001973-1|BAA92011.1|  865|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11111 fis, clone PLACE1005923. ).
          Length = 865

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 18/71 (25%), Positives = 34/71 (47%)
 Frame = +3

Query: 81  LKIEEIARKNGDTDKAISNSNPGNAIPSGTTNRGNVTSNVETTILDLRRKDNTNNTXPXR 260
           L++ E++ K  +T++   NSN G  +P G +    V  ++E T+ ++  +D   N     
Sbjct: 137 LEVNELSGKLDNTNEY--NSNDGKKLPQGESRSYEVMGSMEETLCNIDDRDGNRNVHLEF 194

Query: 261 L*RTHRYSGRE 293
             R  R  G +
Sbjct: 195 TERESRKDGED 205


>AK001746-1|BAA91878.1|  440|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10884 fis, clone NT2RP4001950. ).
          Length = 440

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 18/71 (25%), Positives = 34/71 (47%)
 Frame = +3

Query: 81  LKIEEIARKNGDTDKAISNSNPGNAIPSGTTNRGNVTSNVETTILDLRRKDNTNNTXPXR 260
           L++ E++ K  +T++   NSN G  +P G +    V  ++E T+ ++  +D   N     
Sbjct: 23  LEVNELSGKLDNTNEY--NSNDGKKLPQGESRSYEVMGSMEETLCNIDDRDGNRNVHLEF 80

Query: 261 L*RTHRYSGRE 293
             R  R  G +
Sbjct: 81  TERESRKDGED 91


>AB211065-1|BAD95492.1|  865|Homo sapiens ES cell associated
           transcript 11 protein.
          Length = 865

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 18/71 (25%), Positives = 34/71 (47%)
 Frame = +3

Query: 81  LKIEEIARKNGDTDKAISNSNPGNAIPSGTTNRGNVTSNVETTILDLRRKDNTNNTXPXR 260
           L++ E++ K  +T++   NSN G  +P G +    V  ++E T+ ++  +D   N     
Sbjct: 137 LEVNELSGKLDNTNEY--NSNDGKKLPQGESRSYEVMGSMEETLCNIDDRDGNRNVHLEF 194

Query: 261 L*RTHRYSGRE 293
             R  R  G +
Sbjct: 195 TERESRKDGED 205


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,177,185
Number of Sequences: 237096
Number of extensions: 1553928
Number of successful extensions: 2604
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2604
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)