Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0473
         (691 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069818-1|AAL39963.1|  926|Drosophila melanogaster SD06626p pro...    31   1.1  
AE014296-3738|AAN12209.2|  926|Drosophila melanogaster CG10712-P...    31   1.1  
AE014296-3737|AAF51877.2|  926|Drosophila melanogaster CG10712-P...    31   1.1  
AE014296-3736|AAF51878.2|  926|Drosophila melanogaster CG10712-P...    31   1.1  
AJ001514-1|CAA04797.1|  435|Drosophila melanogaster DRING protei...    31   1.9  

>AY069818-1|AAL39963.1|  926|Drosophila melanogaster SD06626p
           protein.
          Length = 926

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +3

Query: 18  NSNTDTTSVGVIYNTPNGDRTLKIEEIARKNGDTDKAISNSNPGNAIPSGTTNRGNVTSN 197
           NSN + TSV     +P G    K+  +A +  DT+     S P    PS   + G V  N
Sbjct: 149 NSNNNNTSVSPTRKSPTG----KLPTLANQLKDTENERPKSKPSTPTPSSVPSAGAVKPN 204


>AE014296-3738|AAN12209.2|  926|Drosophila melanogaster CG10712-PC,
           isoform C protein.
          Length = 926

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +3

Query: 18  NSNTDTTSVGVIYNTPNGDRTLKIEEIARKNGDTDKAISNSNPGNAIPSGTTNRGNVTSN 197
           NSN + TSV     +P G    K+  +A +  DT+     S P    PS   + G V  N
Sbjct: 149 NSNNNNTSVSPTRKSPTG----KLPTLANQLKDTENERPKSKPSTPTPSSVPSAGAVKPN 204


>AE014296-3737|AAF51877.2|  926|Drosophila melanogaster CG10712-PB,
           isoform B protein.
          Length = 926

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +3

Query: 18  NSNTDTTSVGVIYNTPNGDRTLKIEEIARKNGDTDKAISNSNPGNAIPSGTTNRGNVTSN 197
           NSN + TSV     +P G    K+  +A +  DT+     S P    PS   + G V  N
Sbjct: 149 NSNNNNTSVSPTRKSPTG----KLPTLANQLKDTENERPKSKPSTPTPSSVPSAGAVKPN 204


>AE014296-3736|AAF51878.2|  926|Drosophila melanogaster CG10712-PA,
           isoform A protein.
          Length = 926

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +3

Query: 18  NSNTDTTSVGVIYNTPNGDRTLKIEEIARKNGDTDKAISNSNPGNAIPSGTTNRGNVTSN 197
           NSN + TSV     +P G    K+  +A +  DT+     S P    PS   + G V  N
Sbjct: 149 NSNNNNTSVSPTRKSPTG----KLPTLANQLKDTENERPKSKPSTPTPSSVPSAGAVKPN 204


>AJ001514-1|CAA04797.1|  435|Drosophila melanogaster DRING protein
           protein.
          Length = 435

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
 Frame = +3

Query: 51  IYNTPNGDRTLKIEEIARKNGD-----TDKAISNSNPGNAIPSGTTNRGNVTSNVETTIL 215
           +++TP+ D       I R+N D     T  A + ++  NA PS + N G  TS     + 
Sbjct: 197 VHDTPSNDSNSNTNSIDRENRDPGHSGTSAASAITSASNAAPSSSANSGASTSATRMQVD 256

Query: 216 DLRRKDNTNNT 248
           D     +  +T
Sbjct: 257 DASNPPSVRST 267


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,046,715
Number of Sequences: 53049
Number of extensions: 491870
Number of successful extensions: 1711
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1697
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)