Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0473
         (691 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    26   0.29 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    26   0.29 
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   8.4  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   8.4  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 23/69 (33%), Positives = 31/69 (44%)
 Frame = +3

Query: 9   ALDNSNTDTTSVGVIYNTPNGDRTLKIEEIARKNGDTDKAISNSNPGNAIPSGTTNRGNV 188
           +LDNSN   +SVG     P     +K         DT   I   NPGN  PSG  + G+ 
Sbjct: 31  SLDNSNMSMSSVG-----PQSPLDMK--------PDTASLI---NPGNFSPSGPNSPGSF 74

Query: 189 TSNVETTIL 215
           T+   + +L
Sbjct: 75  TAGCHSNLL 83


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 23/69 (33%), Positives = 31/69 (44%)
 Frame = +3

Query: 9   ALDNSNTDTTSVGVIYNTPNGDRTLKIEEIARKNGDTDKAISNSNPGNAIPSGTTNRGNV 188
           +LDNSN   +SVG     P     +K         DT   I   NPGN  PSG  + G+ 
Sbjct: 31  SLDNSNMSMSSVG-----PQSPLDMK--------PDTASLI---NPGNFSPSGPNSPGSF 74

Query: 189 TSNVETTIL 215
           T+   + +L
Sbjct: 75  TAGCHSNLL 83


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 456 EVLKCYILHLKFIKYLISDVIITYK 382
           E+LK   + +K I+Y I  + +T+K
Sbjct: 25  EILKIMAVSMKDIRYCIIHMGLTFK 49


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 408 ISDVIITYKSGNMDLTMCLMHVKI 337
           I  ++ T+K+GN D  M +  ++I
Sbjct: 72  IMKLLRTFKNGNFDFDMIVKQLEI 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,780
Number of Sequences: 438
Number of extensions: 3691
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)