Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0472
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BUP5 Cluster: Chromosome undetermined scaffold_13, wh...    34   2.9  
UniRef50_UPI000023D710 Cluster: hypothetical protein FG05113.1; ...    34   3.9  
UniRef50_Q97GV3 Cluster: ATP-dependent exonuclease (Exonuclease ...    34   3.9  
UniRef50_Q9VJ95 Cluster: CG7180-PA; n=8; Endopterygota|Rep: CG71...    34   3.9  
UniRef50_UPI000023E43C Cluster: hypothetical protein FG04385.1; ...    33   5.1  
UniRef50_Q64MT0 Cluster: Putative uncharacterized protein; n=2; ...    33   8.9  

>UniRef50_A0BUP5 Cluster: Chromosome undetermined scaffold_13, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_13,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 358

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -2

Query: 252 VKLQKCRSKQITCQPSNYVFLE---QNRYLHTKFFTVLNLHSTISSYTHTRNYEKNALKI 82
           +KL+ CR KQI  Q S+ +  E     R  H +F+T +N+   +S    T  Y     ++
Sbjct: 102 IKLKDCRIKQIEQQDSDNLVTEPDLMTRMKHEQFYTEMNVSEDLSITQFTYAYFSYLQRL 161

Query: 81  STNIIIH 61
           + NI ++
Sbjct: 162 AANIDLY 168


>UniRef50_UPI000023D710 Cluster: hypothetical protein FG05113.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG05113.1 - Gibberella zeae PH-1
          Length = 493

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = -3

Query: 308 RFFFGNDIFSKF*TLNGSL*SCKNVAQNK*PVNPRIMYFLNKIGTC 171
           RF  GN ++    T+  +L  CK VAQ+  P+ PR+  F N  GTC
Sbjct: 427 RFLAGNSVWIMVATMLSTLQFCKKVAQDGTPIEPRVQ-FTNG-GTC 470


>UniRef50_Q97GV3 Cluster: ATP-dependent exonuclease (Exonuclease V)
            synthesis protein AddA; n=4; Clostridia|Rep:
            ATP-dependent exonuclease (Exonuclease V) synthesis
            protein AddA - Clostridium acetobutylicum
          Length = 1252

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 147  NLHSTISSYTHTRNYEKNALKISTNIIIHSEYL 49
            NL+ T+  YT+  NY K AL+I T + +  +YL
Sbjct: 1208 NLNETVKKYTYQINYYKRALEIVTGLKVKEKYL 1240


>UniRef50_Q9VJ95 Cluster: CG7180-PA; n=8; Endopterygota|Rep:
           CG7180-PA - Drosophila melanogaster (Fruit fly)
          Length = 682

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
 Frame = -2

Query: 261 WFFVKLQKCRSKQITCQP----SNYVFLEQNRYLHTKFFTVLNLHSTIS-SYTHTRNYEK 97
           W  V  Q+C +  + CQP      Y     N+    K+  V ++H  +S SYT+ + +E 
Sbjct: 488 WSLVYDQECSAVVVLCQPPSQSQQYPSFWPNKSKMEKYGPVFSVHYVMSKSYTNIKQWE- 546

Query: 96  NALKISTNIIIHSEYLKRLLAPT 28
              KI+  I+  +E +  + APT
Sbjct: 547 --FKINKKIVSLTEMMAGVKAPT 567


>UniRef50_UPI000023E43C Cluster: hypothetical protein FG04385.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG04385.1 - Gibberella zeae PH-1
          Length = 555

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
 Frame = +3

Query: 159 KTLCASTYFVQEIHNSRVDR--LFVLSDIFATLQRTI*SLKFGKNIITKKKPHLFEERER 332
           +T+  S Y  +E+  +R  R    +L  +++T++    SL  G++  TKK+   F+E E 
Sbjct: 206 ETVVTSIYEYREVKTTRTVRGGRALLDSLYSTME----SLIPGQHDATKKRAISFKECED 261

Query: 333 ESENTLYCKPTQFTLKKK 386
                ++CKP++F L ++
Sbjct: 262 IMCRLMWCKPSEFRLSQR 279


>UniRef50_Q64MT0 Cluster: Putative uncharacterized protein; n=2;
           Bacteroides fragilis|Rep: Putative uncharacterized
           protein - Bacteroides fragilis
          Length = 83

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
 Frame = +3

Query: 297 KKKPHLFEERERESENTLYCK-----PTQFTLKKKIACVQFTRVRSETFKK 434
           K++  LF+E  RESENT+ C      P  FTL+KK        +R+ TFKK
Sbjct: 21  KRRNTLFQE-VRESENTVKCYHKDKIPRAFTLRKKPG--NLINIRNNTFKK 68


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,870,893
Number of Sequences: 1657284
Number of extensions: 11851121
Number of successful extensions: 25951
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25916
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)