Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0472
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071625-1|AAL49247.1|  682|Drosophila melanogaster RE67475p pro...    34   0.21 
AE014134-2918|AAF53658.2|  682|Drosophila melanogaster CG7180-PA...    34   0.21 

>AY071625-1|AAL49247.1|  682|Drosophila melanogaster RE67475p
           protein.
          Length = 682

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
 Frame = -2

Query: 261 WFFVKLQKCRSKQITCQP----SNYVFLEQNRYLHTKFFTVLNLHSTIS-SYTHTRNYEK 97
           W  V  Q+C +  + CQP      Y     N+    K+  V ++H  +S SYT+ + +E 
Sbjct: 488 WSLVYDQECSAVVVLCQPPSQSQQYPSFWPNKSKMEKYGPVFSVHYVMSKSYTNIKQWE- 546

Query: 96  NALKISTNIIIHSEYLKRLLAPT 28
              KI+  I+  +E +  + APT
Sbjct: 547 --FKINKKIVSLTEMMAGVKAPT 567


>AE014134-2918|AAF53658.2|  682|Drosophila melanogaster CG7180-PA
           protein.
          Length = 682

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
 Frame = -2

Query: 261 WFFVKLQKCRSKQITCQP----SNYVFLEQNRYLHTKFFTVLNLHSTIS-SYTHTRNYEK 97
           W  V  Q+C +  + CQP      Y     N+    K+  V ++H  +S SYT+ + +E 
Sbjct: 488 WSLVYDQECSAVVVLCQPPSQSQQYPSFWPNKSKMEKYGPVFSVHYVMSKSYTNIKQWE- 546

Query: 96  NALKISTNIIIHSEYLKRLLAPT 28
              KI+  I+  +E +  + APT
Sbjct: 547 --FKINKKIVSLTEMMAGVKAPT 567


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,793,499
Number of Sequences: 53049
Number of extensions: 546864
Number of successful extensions: 1072
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)