Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0470
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical pr...    31   0.60 
AL021503-1|CAA16420.2|  309|Caenorhabditis elegans Hypothetical ...    31   0.79 
AL032626-3|CAA21540.1|  306|Caenorhabditis elegans Hypothetical ...    29   4.2  
Z66514-2|CAA91342.1|  229|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical ...    27   9.8  

>Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical
           protein F20E11.1 protein.
          Length = 331

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = -1

Query: 676 ILIEFFFSYALFGDFKIFSLFFLNKLNSKRCSVMFLY------KILVITYLIIV 533
           I + FFF++ +     +    F NKLN KR + MF+Y      +++ ++YL+ V
Sbjct: 26  IFLYFFFAFIIIYTILLPFYVFTNKLNHKRDNEMFIYPTAHFCQMVKVSYLVFV 79


>AL021503-1|CAA16420.2|  309|Caenorhabditis elegans Hypothetical
           protein Y68A4A.2 protein.
          Length = 309

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 676 ILIEFFFSYALFGDFKIFSLFFLNKLNSKRCSVMFLYKI 560
           I + FFF++ +     +    F NK+N KR + MF+Y I
Sbjct: 26  IFLYFFFAFIIIYTILLPFYLFTNKVNHKRDNEMFIYPI 64


>AL032626-3|CAA21540.1|  306|Caenorhabditis elegans Hypothetical
           protein Y37D8A.3 protein.
          Length = 306

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 502 VQRVCKNDGSLLLLNTL*QEFYIETLRNNVWNSI 603
           V+  CKNDG+LL+L  L    +IE  R+ + N +
Sbjct: 228 VRYQCKNDGTLLVLGCLDDGLFIELGRDLLMNGM 261


>Z66514-2|CAA91342.1|  229|Caenorhabditis elegans Hypothetical
           protein K01A11.2 protein.
          Length = 229

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +1

Query: 169 FRQE*RNMEIGSTTVHCTNLGV*FVQCTVECC-YGDLNLALDRGYKI 306
           +++E  NME    TVH    G    +CTV+ C Y + N  L  G  +
Sbjct: 33  YKKELENMETSDITVHKYEGGFKIWECTVDLCDYIEENQTLFAGKSV 79


>AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical
           protein F56H1.5 protein.
          Length = 1015

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 507 LNKRPQNNVFCHSL*I*HIIAGIPFLDFTI 418
           L KR Q NV+C    I H +AG P    TI
Sbjct: 741 LKKRKQENVYCREDVIGHSLAGNPIKMLTI 770


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,083,778
Number of Sequences: 27780
Number of extensions: 313530
Number of successful extensions: 728
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)