Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0469
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6EEU0 Cluster: Putative uncharacterized protein; n=1; ...    36   0.96 
UniRef50_Q7RH25 Cluster: Lecithin:cholesterol acyltransferase, p...    35   1.7  
UniRef50_O50796 Cluster: Antigen, P35, putative; n=17; Borrelia ...    34   2.9  
UniRef50_Q5UP87 Cluster: Uncharacterized protein R11; n=1; Acant...    33   6.7  
UniRef50_Q0SPW7 Cluster: Phage infection protein, putative; n=7;...    33   8.9  
UniRef50_Q7PDN7 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=...    33   8.9  
UniRef50_A2FAK5 Cluster: Putative uncharacterized protein; n=1; ...    33   8.9  

>UniRef50_A6EEU0 Cluster: Putative uncharacterized protein; n=1;
           Pedobacter sp. BAL39|Rep: Putative uncharacterized
           protein - Pedobacter sp. BAL39
          Length = 766

 Score = 35.9 bits (79), Expect = 0.96
 Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = +3

Query: 123 LIILFKFYLPMIFNRNYNKRIKMN-SMRIPLRKHPLN-YLKAIHNV*RFKKTHLYVSLPQ 296
           ++I+F F L M+F  N+   +K+N +M+ PLR   +N +  A   +    +++LY+ +P 
Sbjct: 24  ILIIFTFQLGMMFTGNFEFLVKINLTMKQPLRDVTMNAFASAFAGLFVKVQSYLYLYIPL 83

Query: 297 VLMSLI 314
           + MS++
Sbjct: 84  LTMSIM 89


>UniRef50_Q7RH25 Cluster: Lecithin:cholesterol acyltransferase,
           putative; n=2; Plasmodium (Vinckeia)|Rep:
           Lecithin:cholesterol acyltransferase, putative -
           Plasmodium yoelii yoelii
          Length = 767

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
 Frame = +2

Query: 341 TKEKNTVNIQN-HMVENGSKSTNPPMTDEERDNLIKEL-MSKNRNRQLETLVREMKNKD 511
           T+E     I++ +  EN  K      T+E  ++ +KE+ +SKN N + ET++ E+ N D
Sbjct: 217 TEENEEKEIESKYTEENEEKKNESEYTEENEEDTVKEIEVSKNVNIENETIMEEIDNSD 275


>UniRef50_O50796 Cluster: Antigen, P35, putative; n=17; Borrelia
           burgdorferi group|Rep: Antigen, P35, putative - Borrelia
           burgdorferi (Lyme disease spirochete)
          Length = 288

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +2

Query: 350 KNTVNIQNHMVENGSKSTNPPMTDEERDNLIKELMSKNRNRQLETLVREMKN 505
           KNT N  N     G+ + NP   ++  +N  +   S N+N Q ET + ++KN
Sbjct: 58  KNTSNHTNSENLTGNSTKNPSENNQNLENESQNSKSSNQNSQEETTISKLKN 109


>UniRef50_Q5UP87 Cluster: Uncharacterized protein R11; n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
           protein R11 - Mimivirus
          Length = 267

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
 Frame = +3

Query: 126 IILFKFYL---PMIFNRNYNKRIKMNSMRIPLRKHPLNYLKAIHNV*RFKKTHLYVSLPQ 296
           +IL+  YL   PM  + NY K+ K    +    K  LNY   IHN      T  + +L  
Sbjct: 24  VILYSLYLDIIPMDSSNNYKKKYKKYKRKYIDLKKQLNY-NQIHNFYFVHSTTNFSNLRD 82

Query: 297 VLMSLIHYLHKLCKEPKRKIR*TSKIIW 380
           +L S + Y  K  +  ++K+   S+ ++
Sbjct: 83  ILKSGVIYPGKFLRPDQQKLSVNSEDVF 110


>UniRef50_Q0SPW7 Cluster: Phage infection protein, putative; n=7;
           Clostridium|Rep: Phage infection protein, putative -
           Clostridium perfringens (strain SM101 / Type A)
          Length = 718

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
 Frame = -2

Query: 453 INSFIKLSRSSSVMGGL--VDLEPF-STI*FWMFTVFFSLVLCTICEDNESTTSTLVVKR 283
           I+S IK+        G+  V L PF +T+  W+ ++  + +L   CED E  T   ++++
Sbjct: 500 ISSPIKVKEEQVYDAGIFGVGLTPFYTTLAIWVGSLLLTSLLTAECEDFEDGTKLNLIQK 559

Query: 282 HTG--AFF*IFIRCESLLNNLGDVF 214
           H G    F      ++++  LGD++
Sbjct: 560 HFGKMLLFLTISLIQTVIVVLGDIY 584


>UniRef50_Q7PDN7 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=2;
           Plasmodium (Vinckeia)|Rep: ERYTHROCYTE MEMBRANE PROTEIN
           PFEMP3 - Plasmodium yoelii yoelii
          Length = 643

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
 Frame = +1

Query: 445 RINVKKQKQTVGNSCKRNEK*RQFMNE--ETLKKLFKH-YSLDGKPEM 579
           +IN+K+++  + N C +NE  +Q +N+  +TLK+ F   YS + K +M
Sbjct: 482 KINLKEKENNLINCCIKNESTKQCLNKYNDTLKRTFSEIYSSEEKKQM 529


>UniRef50_A2FAK5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 716

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 16/60 (26%), Positives = 34/60 (56%)
 Frame = +2

Query: 350 KNTVNIQNHMVENGSKSTNPPMTDEERDNLIKELMSKNRNRQLETLVREMKNKDSS*MRK 529
           KN +++QN++ +N    ++     +E D+L      KN N  L+ ++ ++KN + S ++K
Sbjct: 329 KNKIDLQNYLQKNKELQSSILNCQQENDSL------KNHNADLQNIINQIKNDNQSLLQK 382


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,327,322
Number of Sequences: 1657284
Number of extensions: 11421833
Number of successful extensions: 30056
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30032
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)