Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0469
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY533563-1|AAS45544.1| 2663|Homo sapiens ankyrin repeat-containi...    31   4.0  
AY373756-1|AAR25661.1| 2664|Homo sapiens ankyrin repeat-containi...    31   4.0  
AY131227-1|AAN07913.1|  611|Homo sapiens medulloblastoma antigen...    31   4.0  
AB065595-1|BAC05823.1|  312|Homo sapiens seven transmembrane hel...    30   9.1  

>AY533563-1|AAS45544.1| 2663|Homo sapiens ankyrin repeat-containing
           cofactor-1 protein.
          Length = 2663

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 185 KNEFYEDTVAKTSPKLFKSDSQRMKIQK 268
           KN+  ED ++K   K+FK D +++K +K
Sbjct: 779 KNDLKEDKISKEKEKIFKEDKEKLKKEK 806


>AY373756-1|AAR25661.1| 2664|Homo sapiens ankyrin repeat-containing
           protein protein.
          Length = 2664

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 185 KNEFYEDTVAKTSPKLFKSDSQRMKIQK 268
           KN+  ED ++K   K+FK D +++K +K
Sbjct: 780 KNDLKEDKISKEKEKIFKEDKEKLKKEK 807


>AY131227-1|AAN07913.1|  611|Homo sapiens medulloblastoma antigen
           MU-MB-20.240 protein.
          Length = 611

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 185 KNEFYEDTVAKTSPKLFKSDSQRMKIQK 268
           KN+  ED ++K   K+FK D +++K +K
Sbjct: 398 KNDLKEDKISKEKEKIFKEDKEKLKKEK 425


>AB065595-1|BAC05823.1|  312|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 312

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -2

Query: 525 LIHELSLFFISLTRVSNCLFLFFDINSFIKLSRSSSVMGGLV 400
           LIH +SL  +S  R++     F DI S +KLS S + M  L+
Sbjct: 157 LIHTISLRRLSFCRLNAVSHFFCDIPSLLKLSCSDTSMNELL 198


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,616,516
Number of Sequences: 237096
Number of extensions: 1630264
Number of successful extensions: 3052
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3052
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)