Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0468
         (699 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6F1P0 Cluster: TonB-dependent receptor; n=1; Marinobac...    34   2.9  
UniRef50_Q7Q645 Cluster: ENSANGP00000012559; n=2; Culicidae|Rep:...    34   2.9  
UniRef50_A0BX36 Cluster: Chromosome undetermined scaffold_133, w...    34   2.9  
UniRef50_Q4A7Y6 Cluster: Proline dipeptidase; n=4; Mycoplasma hy...    33   5.1  
UniRef50_A5K8D2 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  

>UniRef50_A6F1P0 Cluster: TonB-dependent receptor; n=1; Marinobacter
           algicola DG893|Rep: TonB-dependent receptor -
           Marinobacter algicola DG893
          Length = 646

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 431 SLNIYLSNKRSVSFPLNKIKPRHYVYQHVIISVIFNFNIDLRPPVDQTF 577
           S N+YL     + + +  +K RHYV+ H  +  I N N  L P    ++
Sbjct: 404 STNVYLRGGWGMGYRVPNLKERHYVFDHSQLGYIVNGNPTLEPEESDSY 452


>UniRef50_Q7Q645 Cluster: ENSANGP00000012559; n=2; Culicidae|Rep:
           ENSANGP00000012559 - Anopheles gambiae str. PEST
          Length = 594

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -1

Query: 285 KRWQHYILVTAATIFSLFNCCQFSIMLGAGXLK-N*IRSLYLGKAVRP 145
           K  QH + VT  T  SLFN C  S  LG G  + N +R + L K   P
Sbjct: 86  KMKQHDLKVTGGTYTSLFNACAVSPFLGDGLKRANQLREIMLEKGYEP 133


>UniRef50_A0BX36 Cluster: Chromosome undetermined scaffold_133,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_133,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 342

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -3

Query: 619 YFHLFQQIDFYYGKKGLIYWWPKVYVK--IKNYTYNNVLIHIMTW 491
           YF L QQ++F Y K+  + W  K   K   KNY +  + I IM++
Sbjct: 62  YFFLNQQMNFKYKKQSYVLWTFKKITKQSCKNYNFQMIQIQIMSY 106


>UniRef50_Q4A7Y6 Cluster: Proline dipeptidase; n=4; Mycoplasma
           hyopneumoniae|Rep: Proline dipeptidase - Mycoplasma
           hyopneumoniae (strain 7448)
          Length = 188

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +2

Query: 425 FISLNIYLSNKRSVSFPLNKIKPRHYVYQHVIISVIFN 538
           FISL+  L +K++  F LN +K  H    H++ +V F+
Sbjct: 20  FISLSFLLKHKKNFEFLLNSVKNEHKNATHIVYAVCFS 57


>UniRef50_A5K8D2 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 2721

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 574  LFCHNRNLFVETSESISFSVNDKEAYFSNATMYLIKKY 687
            LF  NR L+ E S+ I  + ND E +FS A   +   Y
Sbjct: 1975 LFAANRTLYYEVSKFIGMNQNDNEVFFSQALSIVASLY 2012


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,130,451
Number of Sequences: 1657284
Number of extensions: 9537029
Number of successful extensions: 18977
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18959
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)