Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0467
(696 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 58 2e-08
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 58 2e-08
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 54 2e-07
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 51 1e-06
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 51 1e-06
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 51 1e-06
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 50 4e-06
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 49 5e-06
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 49 5e-06
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 49 5e-06
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 49 5e-06
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 49 5e-06
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 49 5e-06
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 48 9e-06
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 48 2e-05
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 48 2e-05
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 47 2e-05
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 47 3e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 45 1e-04
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 43 5e-04
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 42 6e-04
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 42 6e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 42 6e-04
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 38 0.010
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 33 0.37
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 31 1.1
AY058720-1|AAL13949.1| 566|Drosophila melanogaster LD46284p pro... 30 3.5
AJ250870-4|CAC17711.1| 409|Drosophila melanogaster chromatin co... 30 3.5
AJ250870-1|CAC17708.1| 410|Drosophila melanogaster chromatin co... 30 3.5
AJ250868-1|CAC17706.1| 410|Drosophila melanogaster chromatin co... 30 3.5
AJ250866-1|CAC17704.1| 409|Drosophila melanogaster chromatin co... 30 3.5
AF359421-1|AAL37554.1| 496|Drosophila melanogaster estrogen-rel... 30 3.5
AF182444-1|AAF03833.1| 410|Drosophila melanogaster disco-intera... 30 3.5
AF175712-1|AAD50505.1| 410|Drosophila melanogaster dsRBD-contai... 30 3.5
AF175711-1|AAD50502.1| 410|Drosophila melanogaster dsRBD-contai... 30 3.5
AE014298-3169|AAN09008.1| 409|Drosophila melanogaster CG17686-P... 30 3.5
AE014298-3168|AAF45390.2| 409|Drosophila melanogaster CG17686-P... 30 3.5
AE014298-3167|AAN09007.1| 410|Drosophila melanogaster CG17686-P... 30 3.5
AE014297-4768|AAF57171.2| 566|Drosophila melanogaster CG11525-P... 30 3.5
AE014297-4767|AAF57169.2| 566|Drosophila melanogaster CG11525-P... 30 3.5
AE014297-4766|AAF57170.2| 566|Drosophila melanogaster CG11525-P... 30 3.5
AE014297-4765|AAF57168.2| 566|Drosophila melanogaster CG11525-P... 30 3.5
AE014296-1388|AAN12015.1| 496|Drosophila melanogaster CG7404-PB... 30 3.5
AF218310-1|AAF67101.1| 410|Drosophila melanogaster Ultrabithora... 29 4.6
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 57.6 bits (133), Expect = 2e-08
Identities = 32/84 (38%), Positives = 47/84 (55%)
Frame = -2
Query: 506 IINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKA 327
+I ++L+K+L+ + QYGFR+G + + L + E+++SK V+LDI A
Sbjct: 554 LIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAA 613
Query: 326 FDRVWHRALLXKLPAYGIPEGLCK 255
FD VWH LL KL G P L K
Sbjct: 614 FDTVWHDGLLHKLKMIGTPIYLIK 637
Score = 42.3 bits (95), Expect = 6e-04
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = -1
Query: 252 IASFLDGRSITVVVDGCCSDTMTINAGVPQGSVLSPTLFILHINDMLSIDG--MHCYADD 79
+ +FL R +V ++ S +NAGVPQGSVL PTLF + +D+ + +ADD
Sbjct: 639 VQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADD 698
Query: 78 STGDARYIGHQSLSRSV 28
+ + + +++S+
Sbjct: 699 AAVYSAGFSYSEINQSM 715
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 694 KHAPLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDRSD-PSNYRPIAITSLLSK 518
K+ P + + P WK A + PI K G D P +YRPI++ S LSK
Sbjct: 490 KNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSK 549
Query: 517 VMEE 506
++E+
Sbjct: 550 ILEK 553
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 57.6 bits (133), Expect = 2e-08
Identities = 32/84 (38%), Positives = 47/84 (55%)
Frame = -2
Query: 506 IINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKA 327
+I ++L+K+L+ + QYGFR+G + + L + E+++SK V+LDI A
Sbjct: 502 LIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAA 561
Query: 326 FDRVWHRALLXKLPAYGIPEGLCK 255
FD VWH LL KL G P L K
Sbjct: 562 FDTVWHDGLLHKLKMIGTPIYLIK 585
Score = 42.3 bits (95), Expect = 6e-04
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = -1
Query: 252 IASFLDGRSITVVVDGCCSDTMTINAGVPQGSVLSPTLFILHINDMLSIDG--MHCYADD 79
+ +FL R +V ++ S +NAGVPQGSVL PTLF + +D+ + +ADD
Sbjct: 587 VQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADD 646
Query: 78 STGDARYIGHQSLSRSV 28
+ + + +++S+
Sbjct: 647 AAVYSAGFSYSEINQSM 663
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 694 KHAPLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDRSD-PSNYRPIAITSLLSK 518
K+ P + + P WK A + PI K G D P +YRPI++ S LSK
Sbjct: 438 KNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSK 497
Query: 517 VMEE 506
++E+
Sbjct: 498 ILEK 501
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 54.0 bits (124), Expect = 2e-07
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = -2
Query: 506 IINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKA 327
+I +L + +R+++ D Q+GFR G S + + LT +A + K AV +D+ +A
Sbjct: 530 LIANRLNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQAFDDKEYCNAVFIDMQQA 589
Query: 326 FDRVWHRALLXKL 288
FDRVWH L+ K+
Sbjct: 590 FDRVWHDGLISKV 602
Score = 37.5 bits (83), Expect = 0.017
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -3
Query: 694 KHAPLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDRSD-PSNYRPIAITSLLSK 518
K P++ L +Y P WK A + I K G + P +YRPI++ S LSK
Sbjct: 466 KALPVRAILYLALIYNAILRVQFFPKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSK 525
Query: 517 VME 509
+ E
Sbjct: 526 LWE 528
Score = 35.1 bits (77), Expect = 0.092
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -1
Query: 252 IASFLDGRSITVVVDGCCSDTMTINAGVPQGSVLSPTLFILHINDMLSIDGMH 94
+ S+L+ R V V S + AGVPQGSVL P L+ + D+ + H
Sbjct: 614 LKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYH 666
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 51.2 bits (117), Expect = 1e-06
Identities = 36/96 (37%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -2
Query: 563 PLELQTYRDNFLAFQGDGGIINIQLLKYLED----RQLISDRQYGFRHGRSAGDLLVYLT 396
P L +YR L G ++ LLK L D + I Q+GFR A L +T
Sbjct: 108 PFALNSYRPISL-LSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVT 166
Query: 395 HKWAEALESKGEALAVSLDIAKAFDRVWHRALLXKL 288
+A + K A LDI +AFDRVWH LL KL
Sbjct: 167 QFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKL 202
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 685 PLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDRSDPSN-YRPIAITSLLSKVME 509
P K L +Y T P+ WK A + IPK G N YRPI++ S LSK++E
Sbjct: 69 PTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLE 128
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 IASFLDGRSITVVVDGCCSDTM-TINAGVPQGSVLSPTLFILHINDM 115
+ ++L R+ +V +DG + + I AGVPQGS+L P L+ ++ +DM
Sbjct: 214 LENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 260
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 51.2 bits (117), Expect = 1e-06
Identities = 36/96 (37%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -2
Query: 563 PLELQTYRDNFLAFQGDGGIINIQLLKYLED----RQLISDRQYGFRHGRSAGDLLVYLT 396
P L +YR L G ++ LLK L D + I Q+GFR A L +T
Sbjct: 555 PFALNSYRPISL-LSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVT 613
Query: 395 HKWAEALESKGEALAVSLDIAKAFDRVWHRALLXKL 288
+A + K A LDI +AFDRVWH LL KL
Sbjct: 614 QFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKL 649
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 685 PLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDRSDPSN-YRPIAITSLLSKVME 509
P K L +Y T P+ WK A + IPK G N YRPI++ S LSK++E
Sbjct: 516 PTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLE 575
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 IASFLDGRSITVVVDGCCSDTM-TINAGVPQGSVLSPTLFILHINDM 115
+ ++L R+ +V +DG + + I AGVPQGS+L P L+ ++ +DM
Sbjct: 661 LENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 707
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 51.2 bits (117), Expect = 1e-06
Identities = 36/96 (37%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -2
Query: 563 PLELQTYRDNFLAFQGDGGIINIQLLKYLED----RQLISDRQYGFRHGRSAGDLLVYLT 396
P L +YR L G ++ LLK L D + I Q+GFR A L +T
Sbjct: 555 PFALNSYRPISL-LSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVT 613
Query: 395 HKWAEALESKGEALAVSLDIAKAFDRVWHRALLXKL 288
+A + K A LDI +AFDRVWH LL KL
Sbjct: 614 QFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKL 649
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 685 PLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDRSDPSN-YRPIAITSLLSKVME 509
P K L +Y T P+ WK A + IPK G N YRPI++ S LSK++E
Sbjct: 516 PTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLE 575
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 IASFLDGRSITVVVDGCCSDTM-TINAGVPQGSVLSPTLFILHINDM 115
+ ++L R+ +V +DG + + I AGVPQGS+L P L+ ++ +DM
Sbjct: 661 LENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 707
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 49.6 bits (113), Expect = 4e-06
Identities = 26/61 (42%), Positives = 34/61 (55%)
Frame = -2
Query: 470 RQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKAFDRVWHRALLXK 291
++ I Q+GFR + + +T EA E K AV LDI++AFDRVWH LL K
Sbjct: 586 KKAIPLHQFGFRKEHGSEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLK 645
Query: 290 L 288
L
Sbjct: 646 L 646
Score = 42.3 bits (95), Expect = 6e-04
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 694 KHAPLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKG-DRSDPSNYRPIAITSLLSK 518
K P K T L +Y P +WK A V I K G ++P +YRPI++ S LSK
Sbjct: 510 KTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSANEPRSYRPISLLSGLSK 569
Query: 517 VME 509
+ E
Sbjct: 570 IFE 572
Score = 32.7 bits (71), Expect = 0.49
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 IASFLDGRSITVVVD-GCCSDTMTINAGVPQGSVLSPTLFILHINDM 115
+ S+L R+ V G S T I AGVPQGS L P L+ + +DM
Sbjct: 658 LESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDM 704
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = -2
Query: 470 RQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKAFDRVWHRALLXK 291
++ I Q+GFR + +T EA E K AV LDI++AFDRVWH LL K
Sbjct: 470 KKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLK 529
Query: 290 L 288
L
Sbjct: 530 L 530
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 694 KHAPLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDR-SDPSNYRPIAITSLLSK 518
K P K T L +Y P +WK A V I K G +DP +YRPI++ S LSK
Sbjct: 394 KTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSK 453
Query: 517 VME 509
+ E
Sbjct: 454 MFE 456
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 IASFLDGRSITVVVD-GCCSDTMTINAGVPQGSVLSPTLFILHINDM 115
+ S+L R+ V G S I AGVPQGS L P L+ + +DM
Sbjct: 542 LESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 588
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = -2
Query: 470 RQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKAFDRVWHRALLXK 291
++ I Q+GFR + +T EA E K AV LDI++AFDRVWH LL K
Sbjct: 598 KKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLK 657
Query: 290 L 288
L
Sbjct: 658 L 658
Score = 42.7 bits (96), Expect = 5e-04
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 694 KHAPLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDRS-DPSNYRPIAITSLLSK 518
K P K T L +Y P +WK A V I K G S +P +YRPI++ S LSK
Sbjct: 522 KTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSSNEPKSYRPISLLSGLSK 581
Query: 517 VME 509
+ E
Sbjct: 582 MFE 584
Score = 32.7 bits (71), Expect = 0.49
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 IASFLDGRSITVVVD-GCCSDTMTINAGVPQGSVLSPTLFILHINDM 115
+ S+L R+ V G S T I AGVPQGS L P L+ + +DM
Sbjct: 670 LESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDM 716
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = -2
Query: 470 RQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKAFDRVWHRALLXK 291
++ I Q+GFR + +T EA E K AV LDI++AFDRVWH LL K
Sbjct: 586 KKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLK 645
Query: 290 L 288
L
Sbjct: 646 L 646
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 694 KHAPLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDR-SDPSNYRPIAITSLLSK 518
K P K T L +Y P +WK A V I K G +DP +YRPI++ S LSK
Sbjct: 510 KTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSK 569
Query: 517 VME 509
+ E
Sbjct: 570 MFE 572
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 IASFLDGRSITVVVD-GCCSDTMTINAGVPQGSVLSPTLFILHINDM 115
+ S+L R+ V G S I AGVPQGS L P L+ + +DM
Sbjct: 658 LESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 704
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = -2
Query: 470 RQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKAFDRVWHRALLXK 291
++ I Q+GFR + +T EA E K AV LDI++AFDRVWH LL K
Sbjct: 586 KKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLK 645
Query: 290 L 288
L
Sbjct: 646 L 646
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 694 KHAPLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDR-SDPSNYRPIAITSLLSK 518
K P K T L +Y P +WK A V I K G +DP +YRPI++ S LSK
Sbjct: 510 KALPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSK 569
Query: 517 VME 509
+ E
Sbjct: 570 MFE 572
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 IASFLDGRSITVVVD-GCCSDTMTINAGVPQGSVLSPTLFILHINDM 115
+ S+L R+ V G S I AGVPQGS L P L+ + +DM
Sbjct: 658 LESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 704
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = -2
Query: 470 RQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKAFDRVWHRALLXK 291
++ I Q+GFR + +T EA E K AV LDI++AFDRVWH LL K
Sbjct: 548 KKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLK 607
Query: 290 L 288
L
Sbjct: 608 L 608
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 694 KHAPLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDR-SDPSNYRPIAITSLLSK 518
K P K T L +Y P +WK A V I K G +DP +YRPI++ S LSK
Sbjct: 472 KTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSK 531
Query: 517 VME 509
+ E
Sbjct: 532 MFE 534
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 IASFLDGRSITVVVD-GCCSDTMTINAGVPQGSVLSPTLFILHINDM 115
+ S+L R+ V G S I AGVPQGS L P L+ + +DM
Sbjct: 620 LESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 666
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = -2
Query: 470 RQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKAFDRVWHRALLXK 291
++ I Q+GFR + +T EA E K AV LDI++AFDRVWH LL K
Sbjct: 586 KKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLK 645
Query: 290 L 288
L
Sbjct: 646 L 646
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 694 KHAPLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDR-SDPSNYRPIAITSLLSK 518
K P K T L +Y P +WK A V I K G +DP +YRPI++ S LSK
Sbjct: 510 KTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSK 569
Query: 517 VME 509
+ E
Sbjct: 570 MFE 572
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 IASFLDGRSITVVVD-GCCSDTMTINAGVPQGSVLSPTLFILHINDM 115
+ S+L R+ V G S I AGVPQGS L P L+ + +DM
Sbjct: 658 LESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 704
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 48.4 bits (110), Expect = 9e-06
Identities = 35/96 (36%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = -2
Query: 563 PLELQTYRDNFLAFQGDGGIINIQLLKYLED----RQLISDRQYGFRHGRSAGDLLVYLT 396
P L +YR L G ++ L K L D + I Q+GFR A L +T
Sbjct: 555 PFALNSYRPISL-LSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVT 613
Query: 395 HKWAEALESKGEALAVSLDIAKAFDRVWHRALLXKL 288
+A + K A LDI +AFDRVWH LL KL
Sbjct: 614 QFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKL 649
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 685 PLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDRSDPSN-YRPIAITSLLSKVME 509
P K L +Y T P+ WK A + IPK G N YRPI++ S LSK++E
Sbjct: 516 PTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLE 575
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 IASFLDGRSITVVVDGCCSDTM-TINAGVPQGSVLSPTLFILHINDM 115
+ ++L R+ +V +DG + + I AGVPQGS+L P L+ ++ +DM
Sbjct: 661 LENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 707
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 47.6 bits (108), Expect = 2e-05
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = -1
Query: 252 IASFLDGRSITVVVDGCCSDTMTINAGVPQGSVLSPTLFILHINDM 115
+ SFL+ R+ V VDG S I AGVPQGSVL PTL+ + +DM
Sbjct: 615 VKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDM 660
Score = 45.6 bits (103), Expect = 6e-05
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = -2
Query: 506 IINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKA 327
I+N +LL + + I Q+GFR + L + + EA+E+K A+ LDI +A
Sbjct: 532 ILN-RLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQA 590
Query: 326 FDRVWHRALLXK 291
FDRVWH LL K
Sbjct: 591 FDRVWHPGLLYK 602
Score = 32.3 bits (70), Expect = 0.65
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 622 PSSWKTAHVHPIPKKGDR-SDPSNYRPIAITSLLSKVME 509
P +WK+A + I K G +D +YRP ++ L K+ME
Sbjct: 491 PKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIME 529
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 47.6 bits (108), Expect = 2e-05
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = -1
Query: 252 IASFLDGRSITVVVDGCCSDTMTINAGVPQGSVLSPTLFILHINDM 115
+ SFL+ R+ V VDG S I AGVPQGSVL PTL+ + +DM
Sbjct: 417 VKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDM 462
Score = 45.6 bits (103), Expect = 6e-05
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = -2
Query: 506 IINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKA 327
I+N +LL + + I Q+GFR + L + + EA+E+K A+ LDI +A
Sbjct: 334 ILN-RLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQA 392
Query: 326 FDRVWHRALLXK 291
FDRVWH LL K
Sbjct: 393 FDRVWHPGLLYK 404
Score = 34.3 bits (75), Expect = 0.16
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 622 PSSWKTAHVHPIPKKGDR-SDPSNYRPIAITSLLSKVME 509
P +WK+A + I K G +D +YRPI++ L K+ME
Sbjct: 293 PKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIME 331
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/73 (31%), Positives = 41/73 (56%)
Frame = -2
Query: 506 IINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKA 327
+I ++++ +E + + + Q+GFR G + L + + A +SK ++ LDI +A
Sbjct: 529 LIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTAYDSKEYCNSLFLDIREA 588
Query: 326 FDRVWHRALLXKL 288
FDRVWH L K+
Sbjct: 589 FDRVWHIGLQLKI 601
Score = 42.3 bits (95), Expect = 6e-04
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = -1
Query: 252 IASFLDGRSITVVVDGCCSDTMTINAGVPQGSVLSPTLFILHINDM 115
+ S+L+GR V S + AGVPQGSVL P L+ L+ +DM
Sbjct: 613 LKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDM 658
Score = 36.3 bits (80), Expect = 0.040
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = -3
Query: 691 HAPLKLTPRLTRLY-RLSYNT----NRVPSSWKTAHVHPIPKKGD-RSDPSNYRPIAITS 530
+A LK PR LY L +N P WK + I K G +P++YRPI++
Sbjct: 461 NATLKALPRQAILYITLVFNAIVRLQYFPYQWKLGIISMIHKPGKPEREPASYRPISLLP 520
Query: 529 LLSKVMEES*TSNFLSIL 476
+SKV E +SI+
Sbjct: 521 SISKVFERLIAVRIVSIM 538
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 46.8 bits (106), Expect = 3e-05
Identities = 26/78 (33%), Positives = 41/78 (52%)
Frame = -2
Query: 506 IINIQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKA 327
II +L +++ LIS Q F+ S D L+ + H + AL +K ++ D +A
Sbjct: 529 IIAQRLTWFIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNALSTKNHVSILATDFERA 588
Query: 326 FDRVWHRALLXKLPAYGI 273
FDRV A+L +L +GI
Sbjct: 589 FDRVGIHAVLCRLERWGI 606
Score = 39.5 bits (88), Expect = 0.004
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = -1
Query: 252 IASFLDGRSITVVVDGCCSDTMTINAGVPQGSVLSPTLFILHINDMLSIDGMH------C 91
I +F+ RS V ++ S++ ++ G+PQGS LS LF++ I D+ I H
Sbjct: 614 IKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLFMIAIEDINDIVTRHKDIYISL 673
Query: 90 YADDS 76
YADD+
Sbjct: 674 YADDA 678
Score = 39.1 bits (87), Expect = 0.006
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = -3
Query: 676 LTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDR-SDPSNYRPIAITSLLSKVMEE 506
L +L ++ T + P +W++A + PI K SD ++YRPI++ S L K +E+
Sbjct: 471 LKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDINSYRPISLLSCLGKTLEK 528
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/59 (37%), Positives = 38/59 (64%)
Frame = -2
Query: 464 LISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKAFDRVWHRALLXKL 288
LI+D+Q+GF+ G+S D L+Y+ + +SK V+LD ++AFDRV +++ +L
Sbjct: 538 LINDKQFGFKKGKSTSDCLLYVDYL---ITKSKMHTSLVTLDFSRAFDRVGVHSIIQQL 593
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/55 (30%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 667 RLTRLYRLSYNTNRVPSSWKTAHVHPIPKKG-DRSDPSNYRPIAITSLLSKVMEE 506
R+T+L+ +N++ +P ++KT+ + PI K D++ S+YRPI++ ++K++++
Sbjct: 470 RITKLFNEIFNSH-IPQAYKTSLIIPILKPNTDKTKTSSYRPISLNCCIAKILDK 523
Score = 39.5 bits (88), Expect = 0.004
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Frame = -1
Query: 252 IASFLDGRSITVVVDGCCSDTMTINAGVPQGSVLSPTLFILHINDMLSIDGMH------C 91
I +F+ R ITV V S + + G+PQGS +S LF++ N + +I +H
Sbjct: 606 IKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPISVILFLIAFNKLSNIISLHKEIKFNA 665
Query: 90 YADD 79
YADD
Sbjct: 666 YADD 669
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 42.7 bits (96), Expect = 5e-04
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = -1
Query: 273 P*GTLQGIASFLDGRSITVVVDGCCSDTMTINAGVPQGSVLSPTLFILHINDM 115
P T + + S+L R V + S TI AGVPQGSVL PTL++++ D+
Sbjct: 604 PESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADI 656
Score = 40.7 bits (91), Expect = 0.002
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = -2
Query: 497 IQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKAFDR 318
I+L ++ +I Q+GFR + + +T + A E + AV LD+++AFD+
Sbjct: 530 IRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIRTAFEYREYCTAVFLDVSQAFDK 589
Query: 317 VWHRALLXKLPAYGIPEGLCK 255
VW L+ K+ +PE K
Sbjct: 590 VWLDGLMFKI-KISLPESTHK 609
Score = 37.5 bits (83), Expect = 0.017
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 664 LTRLYRLSYNTNRVPSSWKTAHVHPIPKKG-DRSDPSNYRPIAITSLLSKVMEE 506
+T+L+ P WK + IPK G + + S+YRPI++ S +SK+ E+
Sbjct: 473 ITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEK 526
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 42.3 bits (95), Expect = 6e-04
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = -3
Query: 622 PSSWKTAHVHPIPKKG-DRSDPSNYRPIAITSLLSKVMEE 506
P WK + + IPK G D++ PS+YRPI++ + LSK+ E+
Sbjct: 485 PQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEK 524
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = -2
Query: 497 IQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKAFDR 318
+++ +L + Q+GFR + + +T + A E + A+ LD+A+AFDR
Sbjct: 528 LRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDR 587
Query: 317 VWHRALLXKL 288
VW LL K+
Sbjct: 588 VWLDGLLFKI 597
Score = 37.9 bits (84), Expect = 0.013
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -1
Query: 273 P*GTLQGIASFLDGRSITVVVDGCCSDTMTINAGVPQGSVLSPTLFILHIND 118
P T + + S+L R + D S I AGVPQGSVL P L+ L+ D
Sbjct: 602 PQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTAD 653
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 42.3 bits (95), Expect = 6e-04
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = -1
Query: 252 IASFLDGRSITVVVDGCCSDTMTINAGVPQGSVLSPTLFILHINDM 115
+ S+LD R V S TI AGVPQGSVL P L+ L+ D+
Sbjct: 150 LKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADI 195
Score = 36.7 bits (81), Expect = 0.030
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -3
Query: 685 PLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPK-KGDRSDPSNYRPIAITSLLSKVME 509
P+ R+ L+ P WK + + IPK + D++ PS YRPI++ + LSK+ E
Sbjct: 6 PMCAVMRICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQPS-YRPISLLTCLSKLFE 64
Query: 508 E 506
+
Sbjct: 65 K 65
Score = 35.9 bits (79), Expect = 0.053
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = -2
Query: 497 IQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKAFDR 318
+++ +L+ + Q+ F A + + +T + A E + A+ LD+A+AFDR
Sbjct: 69 LRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAFEHREYCTALFLDVAQAFDR 128
Query: 317 VWHRALLXKL 288
VW L+ K+
Sbjct: 129 VWLDGLMFKI 138
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 42.3 bits (95), Expect = 6e-04
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = -3
Query: 622 PSSWKTAHVHPIPKKG-DRSDPSNYRPIAITSLLSKVMEE 506
P WK + + IPK G D++ PS+YRPI++ + LSK+ E+
Sbjct: 485 PQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEK 524
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = -2
Query: 497 IQLLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHKWAEALESKGEALAVSLDIAKAFDR 318
+++ +L + Q+GFR + + +T + A E + A+ LD+A+AFDR
Sbjct: 528 LRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDR 587
Query: 317 VWHRALLXKL 288
VW LL K+
Sbjct: 588 VWLDGLLFKI 597
Score = 35.5 bits (78), Expect = 0.069
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = -1
Query: 273 P*GTLQGIASFLDGRSITVVVDGCCSDTMTINAGVPQGSVLSPTLFILHIND 118
P T + + S+L + D S I AGVPQGSVL P L+ L+ D
Sbjct: 602 PQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTAD 653
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 38.3 bits (85), Expect = 0.010
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Frame = -1
Query: 183 INAGVPQGSVLSPTLFILHINDMLSID-----GMHCYADD 79
++AGVPQGSVL P L+ + + +LSI +HC+ADD
Sbjct: 609 VSAGVPQGSVLGPILWNIMYDGILSISKPRGVELHCFADD 648
Score = 32.7 bits (71), Expect = 0.49
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = -2
Query: 461 ISDRQYGFRHGRSAGDLLVYLTHKWAEALE-------SKGEALAVSLDIAKAFDRVWHRA 303
+ +QYGFR G+S D L +T +AL+ SK ++LD+ AF+
Sbjct: 510 LQGQQYGFRKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPI 569
Query: 302 LLXKLPAYGIPE 267
+L + G+P+
Sbjct: 570 ILGAMRNLGVPD 581
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 33.1 bits (72), Expect = 0.37
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -2
Query: 347 SLDIAKAFDRVWHRALLXKLPAYGIPEG 264
+LD++KAFD + H ++ L AYG P+G
Sbjct: 480 NLDVSKAFDSLSHASIYDTLRAYGAPKG 507
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -3
Query: 685 PLKLTPRLTRLYRLSYNTNRVPSSWKTAHVHPIPKKGDRS--DPSNYRPIAITSLLSKVM 512
P L +R RL Y P+ WK V + K D+ +PS+YR I + + KV+
Sbjct: 470 PEHLASLFSRCIRLGY----FPAEWKCPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVL 525
Query: 511 E 509
E
Sbjct: 526 E 526
>AY058720-1|AAL13949.1| 566|Drosophila melanogaster LD46284p
protein.
Length = 566
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 148 GEHRTLWNTSVDGHGIGAAAVDDNCDAPSIQKASDPLQSPSGIPYAGS 291
G H ++D H I A VDD + S Q A+ S G AGS
Sbjct: 98 GPHNNNIGLAMDAHSINAILVDDEQPSTSAQAAAAAAASAGGSAGAGS 145
>AJ250870-4|CAC17711.1| 409|Drosophila melanogaster chromatin
component KLETT protein.
Length = 409
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 662 NASISPLVQYQQGSVFMEDCSCPPYPQKG*PVGPLELQTYRDNFLAFQGDGGIINIQL 489
NA++ PL+Q + +++ P P+ +Q+ +D FLA Q G +QL
Sbjct: 23 NATVKPLIQMPLQAANVQEQQSSPVALYPTSASPVAVQSPQDAFLAVQSPGAPAPVQL 80
>AJ250870-1|CAC17708.1| 410|Drosophila melanogaster chromatin
component KLETT protein.
Length = 410
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 662 NASISPLVQYQQGSVFMEDCSCPPYPQKG*PVGPLELQTYRDNFLAFQGDGGIINIQL 489
NA++ PL+Q + +++ P P+ +Q+ +D FLA Q G +QL
Sbjct: 24 NATVKPLIQMPLQAANVQEQQSSPVALYPTSASPVAVQSPQDAFLAVQSPGAPAPVQL 81
>AJ250868-1|CAC17706.1| 410|Drosophila melanogaster chromatin
component KLETT protein.
Length = 410
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 662 NASISPLVQYQQGSVFMEDCSCPPYPQKG*PVGPLELQTYRDNFLAFQGDGGIINIQL 489
NA++ PL+Q + +++ P P+ +Q+ +D FLA Q G +QL
Sbjct: 24 NATVKPLIQMPLQAANVQEQQSSPVALYPTSASPVAVQSPQDAFLAVQSPGAPAPVQL 81
>AJ250866-1|CAC17704.1| 409|Drosophila melanogaster chromatin
component KLETT protein.
Length = 409
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 662 NASISPLVQYQQGSVFMEDCSCPPYPQKG*PVGPLELQTYRDNFLAFQGDGGIINIQL 489
NA++ PL+Q + +++ P P+ +Q+ +D FLA Q G +QL
Sbjct: 23 NATVKPLIQMPLQAANVQEQQSSPVALYPTSASPVAVQSPQDAFLAVQSPGAPAPVQL 80
>AF359421-1|AAL37554.1| 496|Drosophila melanogaster
estrogen-related receptor splicevariant protein.
Length = 496
Score = 29.9 bits (64), Expect = 3.5
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 189 MTINAGVPQGSVLSPTLFILHINDMLSIDGMHCYADDSTGDARYIGHQSL--SRSVVHER 16
M AG QG+ +S + ILHI + C++ S A G L S SV ER
Sbjct: 1 MKFYAGEGQGTNMSDGVSILHIKQEVDTPSASCFSPSSKSTATQSGTNGLKSSPSVSPER 60
Query: 15 RL 10
+L
Sbjct: 61 QL 62
>AF182444-1|AAF03833.1| 410|Drosophila melanogaster
disco-interacting protein protein.
Length = 410
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 662 NASISPLVQYQQGSVFMEDCSCPPYPQKG*PVGPLELQTYRDNFLAFQGDGGIINIQL 489
NA++ PL+Q + +++ P P+ +Q+ +D FLA Q G +QL
Sbjct: 24 NATVKPLIQMPLQAANVQEQQSSPVALYPTSASPVAVQSPQDAFLAVQSPGAPAPVQL 81
>AF175712-1|AAD50505.1| 410|Drosophila melanogaster
dsRBD-containing protein dip1-c protein.
Length = 410
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 662 NASISPLVQYQQGSVFMEDCSCPPYPQKG*PVGPLELQTYRDNFLAFQGDGGIINIQL 489
NA++ PL+Q + +++ P P+ +Q+ +D FLA Q G +QL
Sbjct: 24 NATVKPLIQMPLQAANVQEQQSSPVALYPTSASPVAVQSPQDAFLAVQSPGAPAPVQL 81
>AF175711-1|AAD50502.1| 410|Drosophila melanogaster
dsRBD-containing protein dip1-c splice isoform protein.
Length = 410
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 662 NASISPLVQYQQGSVFMEDCSCPPYPQKG*PVGPLELQTYRDNFLAFQGDGGIINIQL 489
NA++ PL+Q + +++ P P+ +Q+ +D FLA Q G +QL
Sbjct: 24 NATVKPLIQMPLQAANVQEQQSSPVALYPTSASPVAVQSPQDAFLAVQSPGAPAPVQL 81
>AE014298-3169|AAN09008.1| 409|Drosophila melanogaster CG17686-PB,
isoform B protein.
Length = 409
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 662 NASISPLVQYQQGSVFMEDCSCPPYPQKG*PVGPLELQTYRDNFLAFQGDGGIINIQL 489
NA++ PL+Q + +++ P P+ +Q+ +D FLA Q G +QL
Sbjct: 23 NATVKPLIQMPLQAANVQEQQSSPVALYPTSASPVAVQSPQDAFLAVQSPGAPAPVQL 80
>AE014298-3168|AAF45390.2| 409|Drosophila melanogaster CG17686-PA,
isoform A protein.
Length = 409
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 662 NASISPLVQYQQGSVFMEDCSCPPYPQKG*PVGPLELQTYRDNFLAFQGDGGIINIQL 489
NA++ PL+Q + +++ P P+ +Q+ +D FLA Q G +QL
Sbjct: 23 NATVKPLIQMPLQAANVQEQQSSPVALYPTSASPVAVQSPQDAFLAVQSPGAPAPVQL 80
>AE014298-3167|AAN09007.1| 410|Drosophila melanogaster CG17686-PD,
isoform D protein.
Length = 410
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 662 NASISPLVQYQQGSVFMEDCSCPPYPQKG*PVGPLELQTYRDNFLAFQGDGGIINIQL 489
NA++ PL+Q + +++ P P+ +Q+ +D FLA Q G +QL
Sbjct: 24 NATVKPLIQMPLQAANVQEQQSSPVALYPTSASPVAVQSPQDAFLAVQSPGAPAPVQL 81
>AE014297-4768|AAF57171.2| 566|Drosophila melanogaster CG11525-PD,
isoform D protein.
Length = 566
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 148 GEHRTLWNTSVDGHGIGAAAVDDNCDAPSIQKASDPLQSPSGIPYAGS 291
G H ++D H I A VDD + S Q A+ S G AGS
Sbjct: 98 GPHNNNIGLAMDAHSINAILVDDEQPSTSAQAAAAAAASAGGSAGAGS 145
>AE014297-4767|AAF57169.2| 566|Drosophila melanogaster CG11525-PC,
isoform C protein.
Length = 566
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 148 GEHRTLWNTSVDGHGIGAAAVDDNCDAPSIQKASDPLQSPSGIPYAGS 291
G H ++D H I A VDD + S Q A+ S G AGS
Sbjct: 98 GPHNNNIGLAMDAHSINAILVDDEQPSTSAQAAAAAAASAGGSAGAGS 145
>AE014297-4766|AAF57170.2| 566|Drosophila melanogaster CG11525-PB,
isoform B protein.
Length = 566
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 148 GEHRTLWNTSVDGHGIGAAAVDDNCDAPSIQKASDPLQSPSGIPYAGS 291
G H ++D H I A VDD + S Q A+ S G AGS
Sbjct: 98 GPHNNNIGLAMDAHSINAILVDDEQPSTSAQAAAAAAASAGGSAGAGS 145
>AE014297-4765|AAF57168.2| 566|Drosophila melanogaster CG11525-PA,
isoform A protein.
Length = 566
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 148 GEHRTLWNTSVDGHGIGAAAVDDNCDAPSIQKASDPLQSPSGIPYAGS 291
G H ++D H I A VDD + S Q A+ S G AGS
Sbjct: 98 GPHNNNIGLAMDAHSINAILVDDEQPSTSAQAAAAAAASAGGSAGAGS 145
>AE014296-1388|AAN12015.1| 496|Drosophila melanogaster CG7404-PB,
isoform B protein.
Length = 496
Score = 29.9 bits (64), Expect = 3.5
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 189 MTINAGVPQGSVLSPTLFILHINDMLSIDGMHCYADDSTGDARYIGHQSL--SRSVVHER 16
M AG QG+ +S + ILHI + C++ S A G L S SV ER
Sbjct: 1 MKFYAGEGQGTNMSDGVSILHIKQEVDTPSASCFSPSSKSTATQSGTNGLKSSPSVSPER 60
Query: 15 RL 10
+L
Sbjct: 61 QL 62
>AF218310-1|AAF67101.1| 410|Drosophila melanogaster Ultrabithorax
binding protein 1 protein.
Length = 410
Score = 29.5 bits (63), Expect = 4.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 662 NASISPLVQYQQGSVFMEDCSCPPYPQKG*PVGPLELQTYRDNFLAFQGDGGIINIQL 489
NA++ PL+Q + +++ P P+ +Q+ +D FLA Q G +QL
Sbjct: 24 NATVKPLIQMPLQAANVQEQQSSPVGLYPTSASPVAVQSPQDAFLAVQSPGAPAPVQL 81
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,088,257
Number of Sequences: 53049
Number of extensions: 795336
Number of successful extensions: 2168
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2160
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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