Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0466
(699 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles ... 46 1e-06
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 42 1e-05
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 42 2e-05
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 42 2e-05
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 42 2e-05
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 42 2e-05
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 42 2e-05
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 42 2e-05
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 42 2e-05
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 42 2e-05
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 42 2e-05
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 42 2e-05
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 42 2e-05
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 41 4e-05
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 25 2.3
AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific do... 24 5.3
AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 24 5.3
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 24 5.3
DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific do... 23 7.0
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 23 7.0
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 23 7.0
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 23 7.0
>U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles
gambiae putativecuticle protein mRNA, partial cds. ).
Length = 160
Score = 46.0 bits (104), Expect = 1e-06
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 9 GSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKK 116
G VV+G YS++ PDG R V Y AD GFNAVV++
Sbjct: 46 GDVVQGSYSVVDPDGTKRTVDYTADPHNGFNAVVRR 81
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 42.3 bits (95), Expect = 1e-05
Identities = 33/82 (40%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +3
Query: 9 GSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKKFLPVNVEKKIEQHEKSHPDPPCHE 188
G V G YSL+ DG+ R V Y AD TGFNAVV++ P V KI Q P H+
Sbjct: 107 GDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVRR-EPSAV--KIAQ--------PVHK 155
Query: 189 VKNEQLKVETKTEHS--ESHHA 248
V + + V H+ + HHA
Sbjct: 156 VIAQPVHVHAPVAHATVQHHHA 177
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 41.5 bits (93), Expect = 2e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 9 GSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKK 116
G V G YSL+ DG+ R V Y AD TGFNAVV++
Sbjct: 115 GDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVRR 150
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 41.5 bits (93), Expect = 2e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 9 GSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKK 116
G V G YSL+ DG+ R V Y AD TGFNAVV++
Sbjct: 107 GDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVRR 142
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 41.5 bits (93), Expect = 2e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 9 GSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKK 116
G V G YSL+ DG+ R V Y AD TGFNAVV++
Sbjct: 107 GDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVRR 142
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 41.5 bits (93), Expect = 2e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 9 GSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKK 116
G V G YSL+ DG+ R V Y AD TGFNAVV++
Sbjct: 115 GDEVHGQYSLLDSDGHHRIVDYHADHHTGFNAVVRR 150
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 41.5 bits (93), Expect = 2e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 9 GSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKK 116
G V G YSL+ DG+ R V Y AD TGFNAVV++
Sbjct: 107 GDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVRR 142
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 41.5 bits (93), Expect = 2e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 9 GSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKK 116
G V G YSL+ DG+ R V Y AD TGFNAVV++
Sbjct: 115 GDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVRR 150
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 41.5 bits (93), Expect = 2e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 9 GSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKK 116
G V G YSL+ DG+ R V Y AD TGFNAVV++
Sbjct: 139 GDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVRR 174
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 41.5 bits (93), Expect = 2e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 9 GSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKK 116
G V G YSL+ DG+ R V Y AD TGFNAVV++
Sbjct: 107 GDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVRR 142
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 41.5 bits (93), Expect = 2e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 9 GSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKK 116
G V G YSL+ DG+ R V Y AD TGFNAVV++
Sbjct: 115 GDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVRR 150
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 41.5 bits (93), Expect = 2e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 9 GSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKK 116
G V G YSL+ DG+ R V Y AD TGFNAVV++
Sbjct: 107 GDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVRR 142
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 41.5 bits (93), Expect = 2e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 9 GSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKK 116
G V G YSL+ DG+ R V Y AD TGFNAVV++
Sbjct: 115 GDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVRR 150
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 40.7 bits (91), Expect = 4e-05
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +3
Query: 9 GSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVK 113
G V G YSL+ DG+ R V Y AD TGFNAVV+
Sbjct: 107 GDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVR 141
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 25.0 bits (52), Expect = 2.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -1
Query: 246 HDDSHCVLFWFLPLIVHFSLHGTVGLDAIFRVA 148
H D H +FW+ PL+ + V D + + A
Sbjct: 336 HQDPHRNIFWWSPLLARLRNNCEVARDRMLQTA 368
>AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific
doublesex protein protein.
Length = 241
Score = 23.8 bits (49), Expect = 5.3
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +1
Query: 484 PRIIKRRTPAEEHHV-EPSKHEALH 555
P I RR+P HHV EP A H
Sbjct: 130 PLTIHRRSPGVPHHVPEPQHMGATH 154
>AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific
doublesex protein protein.
Length = 283
Score = 23.8 bits (49), Expect = 5.3
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +1
Query: 484 PRIIKRRTPAEEHHV-EPSKHEALH 555
P I RR+P HHV EP A H
Sbjct: 130 PLTIHRRSPGVPHHVPEPQHMGATH 154
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 23.8 bits (49), Expect = 5.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 246 HDDSHCVLFWFLPLI 202
H D H LFW+ PL+
Sbjct: 279 HSDPHRDLFWWTPLL 293
>DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific
doublesex protein protein.
Length = 265
Score = 23.4 bits (48), Expect = 7.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 484 PRIIKRRTPAEEHHVEPSKH 543
P I RR+P HHV +H
Sbjct: 154 PLTIHRRSPGVPHHVAEPQH 173
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 23.4 bits (48), Expect = 7.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 484 PRIIKRRTPAEEHHVEPSKH 543
P I RR+P HHV +H
Sbjct: 154 PLTIHRRSPGVPHHVAEPQH 173
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 23.4 bits (48), Expect = 7.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 595 VRFLLHVQYAPVR 557
VR+LLH +Y P R
Sbjct: 429 VRYLLHARYGPAR 441
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 23.4 bits (48), Expect = 7.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 473 IILLRVHCVLREVLQQRLHGGLPHYVFLRV 384
+ LL V C LRE LP Y+F R+
Sbjct: 74 VTLLLVFCGLREADVCAFDNILPDYIFFRM 103
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,836
Number of Sequences: 2352
Number of extensions: 8363
Number of successful extensions: 33
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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