Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0466
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC056676-1|AAH56676.1| 154|Homo sapiens similar to RIKEN cDNA 4... 31 4.0
BX664727-6|CAI39536.1| 823|Homo sapiens ankyrin repeat domain 2... 31 5.2
BX649567-2|CAH71137.1| 823|Homo sapiens ankyrin repeat domain 2... 31 5.2
AL773545-6|CAI12706.1| 823|Homo sapiens ankyrin repeat domain 2... 31 5.2
AL513478-3|CAH72532.1| 823|Homo sapiens ankyrin repeat domain 2... 31 5.2
AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens ... 31 5.2
BC007436-1|AAH07436.2| 185|Homo sapiens family with sequence si... 30 9.1
AY303777-1|AAP76182.1| 185|Homo sapiens unknown protein. 30 9.1
>BC056676-1|AAH56676.1| 154|Homo sapiens similar to RIKEN cDNA
4921524J17 protein.
Length = 154
Score = 31.1 bits (67), Expect = 4.0
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +3
Query: 132 VEKKIEQHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPI*KSIMKRKVKKVLSHQVKN 311
+ +K+ + S PP E K+E + T+ E ++ + K + RK + SH
Sbjct: 37 ISRKLLNAKHSEKSPPSTENKHEAKRRRTERVRREKINSTVNKDLENRKRSRSNSHSDHI 96
Query: 312 LMKRNLPKTTMKKK 353
R PK+ KK
Sbjct: 97 RRGRGRPKSASAKK 110
>BX664727-6|CAI39536.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A2 protein.
Length = 823
Score = 30.7 bits (66), Expect = 5.2
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Frame = +3
Query: 120 LPVNVEKKIEQHEKSHPDPPCHEVKNEQLKVETKTEHSE-----SHHAPI*KSIMKRKVK 284
LPV E++ E+HE+S P + N K E K + SE + A + +RK+
Sbjct: 364 LPVASEEEQERHERSEKKQPQVKEGNNTNKSE-KIQLSENICDSTSSAAAGRLTQQRKIG 422
Query: 285 KVLSHQVKNLMKRNLPKTTMKK--KKVLNPNQLKNHTKKNIVRK 410
K Q +K + T+K+ ++ N N L ++ + RK
Sbjct: 423 KTYPQQFPKKLKEEHDRCTLKQENEEKTNVNMLYKKNREELERK 466
>BX649567-2|CAH71137.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A3 protein.
Length = 823
Score = 30.7 bits (66), Expect = 5.2
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Frame = +3
Query: 120 LPVNVEKKIEQHEKSHPDPPCHEVKNEQLKVETKTEHSE-----SHHAPI*KSIMKRKVK 284
LPV E++ E+HE+S P + N K E K + SE + A + +RK+
Sbjct: 364 LPVASEEEQERHERSEKKQPQVKEGNNTNKSE-KIQLSENICDSTSSAAAGRLTQQRKIG 422
Query: 285 KVLSHQVKNLMKRNLPKTTMKK--KKVLNPNQLKNHTKKNIVRK 410
K Q +K + T+K+ ++ N N L ++ + RK
Sbjct: 423 KTYPQQFPKKLKEEHDRCTLKQENEEKTNVNMLYKKNREELERK 466
>AL773545-6|CAI12706.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A2 protein.
Length = 823
Score = 30.7 bits (66), Expect = 5.2
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Frame = +3
Query: 120 LPVNVEKKIEQHEKSHPDPPCHEVKNEQLKVETKTEHSE-----SHHAPI*KSIMKRKVK 284
LPV E++ E+HE+S P + N K E K + SE + A + +RK+
Sbjct: 364 LPVASEEEQERHERSEKKQPQVKEGNNTNKSE-KIQLSENICDSTSSAAAGRLTQQRKIG 422
Query: 285 KVLSHQVKNLMKRNLPKTTMKK--KKVLNPNQLKNHTKKNIVRK 410
K Q +K + T+K+ ++ N N L ++ + RK
Sbjct: 423 KTYPQQFPKKLKEEHDRCTLKQENEEKTNVNMLYKKNREELERK 466
>AL513478-3|CAH72532.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A1 protein.
Length = 823
Score = 30.7 bits (66), Expect = 5.2
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Frame = +3
Query: 120 LPVNVEKKIEQHEKSHPDPPCHEVKNEQLKVETKTEHSE-----SHHAPI*KSIMKRKVK 284
LPV E++ E+HE+S P + N K E K + SE + A + +RK+
Sbjct: 364 LPVASEEEQERHERSEKKQPQVKEGNNTNKSE-KIQLSENICDSTSSAAAGRLTQQRKIG 422
Query: 285 KVLSHQVKNLMKRNLPKTTMKK--KKVLNPNQLKNHTKKNIVRK 410
K Q +K + T+K+ ++ N N L ++ + RK
Sbjct: 423 KTYPQQFPKKLKEEHDRCTLKQENEEKTNVNMLYKKNREELERK 466
>AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ46115 fis, clone TESTI2037085. ).
Length = 148
Score = 30.7 bits (66), Expect = 5.2
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = +3
Query: 135 EKKIEQHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPI*KSIMKRKVKKVLSHQVKNL 314
+KK ++ +K + K ++ K + K + + K K+K KK + K
Sbjct: 3 KKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62
Query: 315 MKRNLPKTTMKKKKVLNPNQLKNHTKKNIVRK 410
K+N K KKKK + K KK RK
Sbjct: 63 KKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRK 94
>BC007436-1|AAH07436.2| 185|Homo sapiens family with sequence
similarity 44, member B protein.
Length = 185
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/64 (23%), Positives = 34/64 (53%)
Frame = +3
Query: 291 LSHQVKNLMKRNLPKTTMKKKKVLNPNQLKNHTKKNIVRKPTMKSLLKHLTKNTVNP*KN 470
L +V N + +L K + +N NQL+N ++++V+ +++ + + V+P N
Sbjct: 85 LRQKVDNFVSTHLDK--QEWNPTMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLN 142
Query: 471 YLLR 482
++ R
Sbjct: 143 HIFR 146
>AY303777-1|AAP76182.1| 185|Homo sapiens unknown protein.
Length = 185
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/64 (23%), Positives = 34/64 (53%)
Frame = +3
Query: 291 LSHQVKNLMKRNLPKTTMKKKKVLNPNQLKNHTKKNIVRKPTMKSLLKHLTKNTVNP*KN 470
L +V N + +L K + +N NQL+N ++++V+ +++ + + V+P N
Sbjct: 85 LRQKVDNFVSTHLDK--QEWNPTMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLN 142
Query: 471 YLLR 482
++ R
Sbjct: 143 HIFR 146
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,520,674
Number of Sequences: 237096
Number of extensions: 1169149
Number of successful extensions: 3363
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3250
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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