Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0466
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 30 1.8
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 29 2.4
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z70684-1|CAA94597.1| 580|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 29 3.2
U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated k... 29 4.2
U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated ... 29 4.2
U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated k... 29 4.2
D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase ... 29 4.2
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr... 28 7.4
L25599-1|AAA28053.1| 343|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z50070-12|CAA90398.2| 554|Caenorhabditis elegans Hypothetical p... 27 9.8
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 27 9.8
U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL032651-3|CAB60582.1| 554|Caenorhabditis elegans Hypothetical ... 27 9.8
AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical ... 27 9.8
AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans nonsense-medi... 27 9.8
AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor wi... 27 9.8
>U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical
protein C46A5.1 protein.
Length = 497
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 168 PDPPCHEVKNEQLKVETKTEHSESHHAPI*KSIMKRKVKKVLS--HQVKNLMKRNLPKTT 341
P HE K ++ +V T ++ HH +S K K K LS + K K++ K T
Sbjct: 8 PKKKSHERKRKEKRVHTGNGTAKKHHKRKSRSKSKNKPKNGLSCCRKKKKKSKKSKSKVT 67
Query: 342 MK--KKKVLNP 368
K KKKV+ P
Sbjct: 68 KKQPKKKVIKP 78
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +3
Query: 117 FLPVNVEKKIEQHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPI*K--SIMKRKVKKV 290
+LP ++K + P+P +VK Q K + S+S + PI K + KR V+
Sbjct: 2200 YLPGLAKQKNKYIFTYFPNPKLEKVKLSQRKPSRISSASDSEYCPIVKFPKVQKRVVELK 2259
Query: 291 LSHQVKNLMKRNLPKTTMKKKKVLNPNQLKNHTKKNIVRKPT 416
H N + + + K+ P L + T+ + R T
Sbjct: 2260 EDHPTNNSELGIIERKKKELKREDPPAVLMSSTRSTLKRPET 2301
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 123 PVNVEKKIEQHE-KSHPDPPCHEVKNEQLKVETKTEHSESHHAPI*KSIMKRKVKKVLSH 299
PV+ KKIE+ E + PD P K+E+ K ++K E S+ + + K + KK
Sbjct: 71 PVDDVKKIEEKEVEKKPDEPAKSKKSEK-KEKSKNEGSKKEESKDKEKSKKSEDKKSEDP 129
Query: 300 QVKNLMKRNLP-KTTMKK 350
+ ++ K ++ K T KK
Sbjct: 130 KKEDAKKPDVKGKDTFKK 147
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 29.5 bits (63), Expect = 2.4
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +3
Query: 210 VETKTEHSESHHAPI*KSIMKRKVKKVLSHQ-VKNLMKRNLPKTTMKKKKVLNPNQLKNH 386
+ K++H S + + + +K+K K+V + V+ LM R +PK KKKK+ + K
Sbjct: 623 INKKSKHKASRNGKLVR--IKKKTKRVKRGKFVRPLMPR-IPKFVAKKKKLKKVDGKKVL 679
Query: 387 TKKNIV-RKPTMKSLLKHLTKNTVNP*KNYLLRA 485
+K IV K+ TK + K LRA
Sbjct: 680 KRKEIVLTLKVRKASTAKKTKKAMQEKKRKRLRA 713
>Z70684-1|CAA94597.1| 580|Caenorhabditis elegans Hypothetical
protein F28D1.1 protein.
Length = 580
Score = 29.1 bits (62), Expect = 3.2
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Frame = +3
Query: 42 QPDGYIREVKYVADDLTGFNAVVKKFLPVNVEKKIEQH----------EKSHPDPPCHEV 191
+PDG ++++ A D+T V +K + KK++QH +K P E
Sbjct: 8 KPDGGVKKISITATDVTPAKGVEEK-MSWKEYKKMKQHTGGGTRNKLKKKQRPPTENTEG 66
Query: 192 KNEQLKVETKTEHSESHHA---PI*KSIMKRKVKKVLSHQVKNLMKRNLPKTTMKKKKVL 362
+ ++ KV TK E E H I S M+ K+++ K+ +R + T +K+++
Sbjct: 67 RAKKPKVLTK-EQLERHDTGADQIDPSSMRSKLQQEKMKVTKDKFQRRIEATAKAEKRLV 125
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 138 KKIEQHEK-SHPDPPCHEVKNEQLKVETKTEHS 233
KKIE+ K +H +P E KNE+ ETK E S
Sbjct: 614 KKIEKTNKVNHDEPKKEEKKNEEQVKETKLESS 646
>U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated
kinase CePAK protein.
Length = 572
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 330 PKTTMKKKKVLNPNQLKNHTKKNIVRKPTM 419
P+ T KKK + NP KN KK KP +
Sbjct: 38 PEATKKKKTMPNPFMKKNKDKKEASEKPVI 67
>U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated
kinase family protein1, isoform a protein.
Length = 572
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 330 PKTTMKKKKVLNPNQLKNHTKKNIVRKPTM 419
P+ T KKK + NP KN KK KP +
Sbjct: 38 PEATKKKKTMPNPFMKKNKDKKEASEKPVI 67
>U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated
kinase family protein1, isoform b protein.
Length = 569
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 330 PKTTMKKKKVLNPNQLKNHTKKNIVRKPTM 419
P+ T KKK + NP KN KK KP +
Sbjct: 38 PEATKKKKTMPNPFMKKNKDKKEASEKPVI 67
>D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase
protein.
Length = 569
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 330 PKTTMKKKKVLNPNQLKNHTKKNIVRKPTM 419
P+ T KKK + NP KN KK KP +
Sbjct: 38 PEATKKKKTMPNPFMKKNKDKKEASEKPVI 67
>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical protein
F54F12.1 protein.
Length = 1217
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 135 EKKIEQHEKSHPDPPCHEVKNEQLKVETK 221
+KK+E+ +K+HP+ + + Q KVE K
Sbjct: 1185 DKKLEEFKKAHPNYEVRKYERAQKKVEEK 1213
>L25599-1|AAA28053.1| 343|Caenorhabditis elegans Hypothetical
protein F54H12.4 protein.
Length = 343
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/92 (21%), Positives = 43/92 (46%)
Frame = +3
Query: 135 EKKIEQHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPI*KSIMKRKVKKVLSHQVKNL 314
EK+ EK + +PP ++ +NEQL + + +H K++ +K+ + ++
Sbjct: 96 EKRESYQEKDYTNPPVYKAENEQLFDDVPYRNDGINHLKPRKNVY---IKEEPEDEDYHM 152
Query: 315 MKRNLPKTTMKKKKVLNPNQLKNHTKKNIVRK 410
+P+ M++ N N+L +K+ K
Sbjct: 153 EYEKIPEINMEQ----NVNELFTEPQKHAAGK 180
>Z50070-12|CAA90398.2| 554|Caenorhabditis elegans Hypothetical
protein F43G6.5 protein.
Length = 554
Score = 27.5 bits (58), Expect = 9.8
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Frame = +3
Query: 126 VNVEKKIEQHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPI*KSIMKRKVKKVLSHQV 305
+++ K I+Q K + D VK+ + +T+ S + + ++I + +K Q
Sbjct: 448 LDLTKDIQQF-KRNIDYQAKSVKDIEANCAVETDFSYVKRSDLAQTISVKDLK-----QG 501
Query: 306 KNLMKRNLPKTTMKKKKVL-NPNQLKNHTKKNIVRKPTMKSLLKHLTKNTV 455
K K KK+KV N + K ++ K +++SLLK+L K ++
Sbjct: 502 KMYKKPESKDPVSKKRKVSENAPSVPKKQKLDVSEKSSVESLLKNLKKKSL 552
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/45 (22%), Positives = 25/45 (55%)
Frame = +3
Query: 294 SHQVKNLMKRNLPKTTMKKKKVLNPNQLKNHTKKNIVRKPTMKSL 428
SH+ K ++ P + +K + + +L+N +++++ P +K L
Sbjct: 61 SHEEKRILPLGTPGQQVGRKSLKDIRELRNSIDQSLIKPPELKML 105
>U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical
protein ZC53.4 protein.
Length = 1410
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Frame = +3
Query: 264 IMKRKVKKVLSHQVKNLMK-------RNLPKTTMKKKKVLNPNQLKNHTKKNIVRKPTMK 422
I +++ +LS QV NLMK R + + + + V+N +K K + RK +
Sbjct: 575 IQRQQEDDILSLQVLNLMKLMGRKGIREIRRIDINRTIVMNKKNVKEFIKTKMNRKEMLD 634
Query: 423 SLLKHLT 443
+ KH++
Sbjct: 635 FIDKHIS 641
>AL032651-3|CAB60582.1| 554|Caenorhabditis elegans Hypothetical
protein F43G6.5 protein.
Length = 554
Score = 27.5 bits (58), Expect = 9.8
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Frame = +3
Query: 126 VNVEKKIEQHEKSHPDPPCHEVKNEQLKVETKTEHSESHHAPI*KSIMKRKVKKVLSHQV 305
+++ K I+Q K + D VK+ + +T+ S + + ++I + +K Q
Sbjct: 448 LDLTKDIQQF-KRNIDYQAKSVKDIEANCAVETDFSYVKRSDLAQTISVKDLK-----QG 501
Query: 306 KNLMKRNLPKTTMKKKKVL-NPNQLKNHTKKNIVRKPTMKSLLKHLTKNTV 455
K K KK+KV N + K ++ K +++SLLK+L K ++
Sbjct: 502 KMYKKPESKDPVSKKRKVSENAPSVPKKQKLDVSEKSSVESLLKNLKKKSL 552
>AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical
protein Y57G7A.6 protein.
Length = 883
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/92 (21%), Positives = 37/92 (40%)
Frame = +3
Query: 159 KSHPDPPCHEVKNEQLKVETKTEHSESHHAPI*KSIMKRKVKKVLSHQVKNLMKRNLPKT 338
+ H P H +K + + S P + +KR+ + ++ Q K + K T
Sbjct: 788 RRHYFKPNHNMKTAREVDPNSQKPVASQSEPETERFVKRRAQTLVKTQPKPVSKAEKIAT 847
Query: 339 TMKKKKVLNPNQLKNHTKKNIVRKPTMKSLLK 434
K+ ++P K +T+ + KS LK
Sbjct: 848 KPKESVKVSPKDAKTNTESEETKAVEKKSELK 879
>AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans
nonsense-mediated mRNA decay trans-acting factor
protein.
Length = 1069
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -2
Query: 551 RASCLDGST*CSSAGVLRLMIRGSQ*IILLRVHCVLREVL--QQRLHGGLPHYVFLRVIL 378
R +D ST + +L ++RG + ++L+ HC L V+ ++ GL +F R++L
Sbjct: 605 RTVLIDESTQATEPEILVSIMRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVL 664
Query: 377 QLIR 366
IR
Sbjct: 665 LGIR 668
>AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 2 protein.
Length = 1069
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -2
Query: 551 RASCLDGST*CSSAGVLRLMIRGSQ*IILLRVHCVLREVL--QQRLHGGLPHYVFLRVIL 378
R +D ST + +L ++RG + ++L+ HC L V+ ++ GL +F R++L
Sbjct: 605 RTVLIDESTQATEPEILVSIMRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVL 664
Query: 377 QLIR 366
IR
Sbjct: 665 LGIR 668
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,028,626
Number of Sequences: 27780
Number of extensions: 189808
Number of successful extensions: 854
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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