Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0465
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   1.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   1.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.6  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   9.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   9.6  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 467 KSEKRIIYFVFHWQHKTLLN 526
           K  K++ YF+ HW  + L++
Sbjct: 155 KKSKQVEYFLIHWYPRMLIS 174


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 467 KSEKRIIYFVFHWQHKTLLN 526
           K  K++ YF+ HW  + L++
Sbjct: 155 KKSKQVEYFLIHWYPRMLIS 174


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -2

Query: 687 VYYQR-WQSVHLDKKNVI 637
           VY  R WQ +HL+KK ++
Sbjct: 531 VYNHRPWQQLHLNKKQIL 548


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 4/14 (28%), Positives = 12/14 (85%)
 Frame = -3

Query: 683 IIKGGNLCIWTKKM 642
           ++ GG +C+W++++
Sbjct: 504 LVLGGEVCLWSEQV 517


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 111 LHYLHFNKGFWSNQFE 158
           +HYL  NK  W N+ E
Sbjct: 90  IHYLIDNKRDWWNELE 105


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 71  LLSYCITVQFCFASTLFAF 127
           +L+  +T+  CF S ++AF
Sbjct: 53  ILTSSVTLHVCFNSYMYAF 71


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 334 SIILRECCCLFSDHSQKELGLCY 266
           +I+L   C      SQK +G+CY
Sbjct: 271 TILLIMTCSGVHSESQKLVGVCY 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,622
Number of Sequences: 336
Number of extensions: 3625
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)