Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0465
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY333285-1|AAR03490.1| 1943|Homo sapiens truncated transient rec... 31 3.0
AY333284-1|AAR03489.1| 2017|Homo sapiens transient receptor pote... 31 3.0
AY333283-1|AAR03488.1| 2017|Homo sapiens transient receptor pote... 31 3.0
AY333282-1|AAR03487.1| 2022|Homo sapiens transient receptor pote... 31 3.0
AL354795-2|CAH70894.1| 2022|Homo sapiens transient receptor pote... 31 3.0
AL354795-1|CAH70893.1| 1133|Homo sapiens transient receptor pote... 31 3.0
AK026281-1|BAB15429.1| 1133|Homo sapiens protein ( Homo sapiens ... 31 3.0
AF448232-1|AAM21562.1| 2022|Homo sapiens LTRPC6 channel kinase 2... 31 3.0
AF350881-1|AAK31202.2| 2022|Homo sapiens channel-kinase 2 protein. 31 3.0
>AY333285-1|AAR03490.1| 1943|Homo sapiens truncated transient receptor
potential cation channel subfamily M member 6 vari
protein.
Length = 1943
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 409 DNYTVVPTAYNKPYRYIPVW*SQHASIILRECCCLFSDHSQKE 281
+ Y + T + KP+ P+ H ++LR CC + H Q+E
Sbjct: 1087 NRYRYIMTYHEKPWLPPPLILLSHVGLLLRRLCCHRAPHDQEE 1129
>AY333284-1|AAR03489.1| 2017|Homo sapiens transient receptor potential
cation channel subfamily M member 6 variant c protein.
Length = 2017
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 409 DNYTVVPTAYNKPYRYIPVW*SQHASIILRECCCLFSDHSQKE 281
+ Y + T + KP+ P+ H ++LR CC + H Q+E
Sbjct: 1082 NRYRYIMTYHEKPWLPPPLILLSHVGLLLRRLCCHRAPHDQEE 1124
>AY333283-1|AAR03488.1| 2017|Homo sapiens transient receptor potential
cation channel subfamily M member 6 variant b protein.
Length = 2017
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 409 DNYTVVPTAYNKPYRYIPVW*SQHASIILRECCCLFSDHSQKE 281
+ Y + T + KP+ P+ H ++LR CC + H Q+E
Sbjct: 1082 NRYRYIMTYHEKPWLPPPLILLSHVGLLLRRLCCHRAPHDQEE 1124
>AY333282-1|AAR03487.1| 2022|Homo sapiens transient receptor potential
cation channel subfamily M member 6 variant a protein.
Length = 2022
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 409 DNYTVVPTAYNKPYRYIPVW*SQHASIILRECCCLFSDHSQKE 281
+ Y + T + KP+ P+ H ++LR CC + H Q+E
Sbjct: 1087 NRYRYIMTYHEKPWLPPPLILLSHVGLLLRRLCCHRAPHDQEE 1129
>AL354795-2|CAH70894.1| 2022|Homo sapiens transient receptor potential
cation channel, subfamily M, member 6 protein.
Length = 2022
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 409 DNYTVVPTAYNKPYRYIPVW*SQHASIILRECCCLFSDHSQKE 281
+ Y + T + KP+ P+ H ++LR CC + H Q+E
Sbjct: 1087 NRYRYIMTYHEKPWLPPPLILLSHVGLLLRRLCCHRAPHDQEE 1129
>AL354795-1|CAH70893.1| 1133|Homo sapiens transient receptor
potential cation channel, subfamily M, member 6 protein.
Length = 1133
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 409 DNYTVVPTAYNKPYRYIPVW*SQHASIILRECCCLFSDHSQKE 281
+ Y + T + KP+ P+ H ++LR CC + H Q+E
Sbjct: 750 NRYRYIMTYHEKPWLPPPLILLSHVGLLLRRLCCHRAPHDQEE 792
>AK026281-1|BAB15429.1| 1133|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22628 fis, clone HSI06177. ).
Length = 1133
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 409 DNYTVVPTAYNKPYRYIPVW*SQHASIILRECCCLFSDHSQKE 281
+ Y + T + KP+ P+ H ++LR CC + H Q+E
Sbjct: 750 NRYRYIMTYHEKPWLPPPLILLSHVGLLLRRLCCHRAPHDQEE 792
>AF448232-1|AAM21562.1| 2022|Homo sapiens LTRPC6 channel kinase 2
protein.
Length = 2022
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 409 DNYTVVPTAYNKPYRYIPVW*SQHASIILRECCCLFSDHSQKE 281
+ Y + T + KP+ P+ H ++LR CC + H Q+E
Sbjct: 1087 NRYRYIMTYHEKPWLPPPLILLSHVGLLLRRLCCHRAPHDQEE 1129
>AF350881-1|AAK31202.2| 2022|Homo sapiens channel-kinase 2 protein.
Length = 2022
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 409 DNYTVVPTAYNKPYRYIPVW*SQHASIILRECCCLFSDHSQKE 281
+ Y + T + KP+ P+ H ++LR CC + H Q+E
Sbjct: 1087 NRYRYIMTYHEKPWLPPPLILLSHVGLLLRRLCCHRAPHDQEE 1129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,922,613
Number of Sequences: 237096
Number of extensions: 1992472
Number of successful extensions: 2278
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2269
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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