Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0465
         (697 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81030-13|CAB02705.2|  358|Caenorhabditis elegans Hypothetical p...    29   4.2  
U41036-8|ABA61866.1|  590|Caenorhabditis elegans Dopamine recept...    27   9.7  
U41036-7|ABA61865.1|  607|Caenorhabditis elegans Dopamine recept...    27   9.7  
U41036-6|ABA61864.1|  605|Caenorhabditis elegans Dopamine recept...    27   9.7  
AY485309-1|AAR37416.1|  607|Caenorhabditis elegans DOP-3 protein.      27   9.7  
AF022985-4|AAB69965.1|  362|Caenorhabditis elegans Hypothetical ...    27   9.7  

>Z81030-13|CAB02705.2|  358|Caenorhabditis elegans Hypothetical
           protein C01G10.3 protein.
          Length = 358

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 42  SNFFKYLFKNYFRTVLQSNFVLRLHYLHFNKGFWS 146
           + FF  LF   F  +L   F L LH L +   FW+
Sbjct: 118 NRFFAMLFPLRFNWLLSIKFTLLLHILCYGNRFWN 152


>U41036-8|ABA61866.1|  590|Caenorhabditis elegans Dopamine receptor
           protein 3, isoformc protein.
          Length = 590

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 9   GHLHTNVNPL*SNFFKYLFKNYFRTVL 89
           G+L++++NPL    F   F+N FR +L
Sbjct: 556 GYLNSSLNPLIYTVFDQRFRNAFRNIL 582


>U41036-7|ABA61865.1|  607|Caenorhabditis elegans Dopamine receptor
           protein 3, isoformb protein.
          Length = 607

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 9   GHLHTNVNPL*SNFFKYLFKNYFRTVL 89
           G+L++++NPL    F   F+N FR +L
Sbjct: 573 GYLNSSLNPLIYTVFDQRFRNAFRNIL 599


>U41036-6|ABA61864.1|  605|Caenorhabditis elegans Dopamine receptor
           protein 3, isoforma protein.
          Length = 605

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 9   GHLHTNVNPL*SNFFKYLFKNYFRTVL 89
           G+L++++NPL    F   F+N FR +L
Sbjct: 571 GYLNSSLNPLIYTVFDQRFRNAFRNIL 597


>AY485309-1|AAR37416.1|  607|Caenorhabditis elegans DOP-3 protein.
          Length = 607

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 9   GHLHTNVNPL*SNFFKYLFKNYFRTVL 89
           G+L++++NPL    F   F+N FR +L
Sbjct: 573 GYLNSSLNPLIYTVFDQRFRNAFRNIL 599


>AF022985-4|AAB69965.1|  362|Caenorhabditis elegans Hypothetical
           protein T15B7.12 protein.
          Length = 362

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 430 IIVDSYTDNYTVVPTAYNK 374
           + + SY+DNYT  PTAY +
Sbjct: 96  LFLRSYSDNYTSYPTAYGQ 114


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,849,892
Number of Sequences: 27780
Number of extensions: 332814
Number of successful extensions: 611
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)