Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0464
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    25   0.59 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   5.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.3  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 356 KKYVYRHFKSIKTLNGVSLKYIFFRQFL 273
           K  +  ++K IKTLNG  +K+I   +++
Sbjct: 128 KPIIAFYYKPIKTLNGHEIKFIRKEEYI 155


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 579 RYYNVMLCCKIS*YSN 626
           +YYN++  C+I  Y N
Sbjct: 328 KYYNILYFCRIMVYLN 343


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 416 QNQLRLFRLPKPNYRKGNEIYQ 481
           Q   ++ R+P P+ RKG+ I++
Sbjct: 354 QKAFQVKRVPDPSKRKGSYIFR 375


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = +1

Query: 487 RTKYFLSCNIYFIL 528
           RT+ F++C ++F++
Sbjct: 129 RTQIFITCELFFVI 142


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +1

Query: 547 VFFIKSFFLIKDIIMSCYVVKYLSTVTFIYFFNKINM 657
           V ++   ++++ ++   Y+V  L  VTF+ F  KI +
Sbjct: 268 VVYVLILYILESLL---YMVTKLVVVTFLKFIKKIQI 301


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 474 YINNTYKIFFKLQHLFYL 527
           ++NN Y I F++   FYL
Sbjct: 293 FLNNFYFIIFQVFESFYL 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,339
Number of Sequences: 336
Number of extensions: 2487
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)