Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0464
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC052262-1|AAH52262.2|  865|Homo sapiens xylosyltransferase II p...    30   6.9  
AY358090-1|AAQ88457.1|  639|Homo sapiens I-branching enzyme prot...    30   6.9  
AJ539163-1|CAD62248.1|  959|Homo sapiens xylosyltransferase I pr...    30   6.9  
AJ277442-1|CAC16788.1|  865|Homo sapiens xylosyltransferase II p...    30   6.9  
AJ277441-1|CAC16787.1|  827|Homo sapiens xylosyltransferase I pr...    30   6.9  

>BC052262-1|AAH52262.2|  865|Homo sapiens xylosyltransferase II
           protein.
          Length = 865

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +3

Query: 459 GKAMRYINNTYKIFFKLQHLFYLAMTCRTRFLHKKL 566
           G+A+R +    K  +  QH FY+ +  R+ +LH+++
Sbjct: 242 GRAIRQLKRLLKAVYHEQHFFYIHVDKRSDYLHREV 277


>AY358090-1|AAQ88457.1|  639|Homo sapiens I-branching enzyme
           protein.
          Length = 639

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +3

Query: 459 GKAMRYINNTYKIFFKLQHLFYLAMTCRTRFLHKKL 566
           G+A+R +    K  +  QH FY+ +  R+ +LH+++
Sbjct: 242 GRAIRQLKRLLKAVYHEQHFFYIHVDKRSDYLHREV 277


>AJ539163-1|CAD62248.1|  959|Homo sapiens xylosyltransferase I
           protein.
          Length = 959

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 11/44 (25%), Positives = 24/44 (54%)
 Frame = +3

Query: 459 GKAMRYINNTYKIFFKLQHLFYLAMTCRTRFLHKKLFFN*RYYN 590
           G+A R +   +K  +   H +Y+ +  R+ +LH+++    R Y+
Sbjct: 336 GRASRQLQRMFKAIYHKDHFYYIHVDKRSNYLHRQVLQVSRQYS 379


>AJ277442-1|CAC16788.1|  865|Homo sapiens xylosyltransferase II
           protein.
          Length = 865

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +3

Query: 459 GKAMRYINNTYKIFFKLQHLFYLAMTCRTRFLHKKL 566
           G+A+R +    K  +  QH FY+ +  R+ +LH+++
Sbjct: 242 GRAIRQLKRLLKAVYHEQHFFYIHVDKRSDYLHREV 277


>AJ277441-1|CAC16787.1|  827|Homo sapiens xylosyltransferase I
           protein.
          Length = 827

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 11/44 (25%), Positives = 24/44 (54%)
 Frame = +3

Query: 459 GKAMRYINNTYKIFFKLQHLFYLAMTCRTRFLHKKLFFN*RYYN 590
           G+A R +   +K  +   H +Y+ +  R+ +LH+++    R Y+
Sbjct: 204 GRASRQLQRMFKAIYHKDHFYYIHVDKRSNYLHRQVLQVSRQYS 247


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,317,068
Number of Sequences: 237096
Number of extensions: 1098217
Number of successful extensions: 1297
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)