Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0464
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069660-1|AAL39805.1|  876|Drosophila melanogaster LD43716p pro...    29   4.6  
AJ430595-1|CAD23246.1|  876|Drosophila melanogaster peptide O-xy...    29   4.6  
AE014296-431|AAF47625.1|  876|Drosophila melanogaster CG32300-PB...    29   4.6  
AY118773-1|AAM50633.1| 1073|Drosophila melanogaster GH11711p pro...    29   6.1  
AE014134-1921|AAF52979.2| 1073|Drosophila melanogaster CG31872-P...    29   6.1  

>AY069660-1|AAL39805.1|  876|Drosophila melanogaster LD43716p
           protein.
          Length = 876

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 459 GKAMRYINNTYKIFFKLQHLFYLAMTCRTRFLHKKLF-FN*RYYNVMLCCK 608
           G+A+R ++   K  +  +H++Y+ +  R  +L++KL     ++ N+ L  K
Sbjct: 258 GRALRQVHRLLKALYAPEHVYYIHVDERQDYLYRKLLELESKFPNIRLARK 308


>AJ430595-1|CAD23246.1|  876|Drosophila melanogaster peptide
           O-xylosyltransferase protein.
          Length = 876

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 459 GKAMRYINNTYKIFFKLQHLFYLAMTCRTRFLHKKLF-FN*RYYNVMLCCK 608
           G+A+R ++   K  +  +H++Y+ +  R  +L++KL     ++ N+ L  K
Sbjct: 258 GRALRQVHRLLKALYAPEHVYYIHVDERQDYLYRKLLELESKFPNIRLARK 308


>AE014296-431|AAF47625.1|  876|Drosophila melanogaster CG32300-PB
           protein.
          Length = 876

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 459 GKAMRYINNTYKIFFKLQHLFYLAMTCRTRFLHKKLF-FN*RYYNVMLCCK 608
           G+A+R ++   K  +  +H++Y+ +  R  +L++KL     ++ N+ L  K
Sbjct: 258 GRALRQVHRLLKALYAPEHVYYIHVDERQDYLYRKLLELESKFPNIRLARK 308


>AY118773-1|AAM50633.1| 1073|Drosophila melanogaster GH11711p protein.
          Length = 1073

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 134  KISLK-KINDLFYNRQKNKLIKKNIYFIFHFSLLAYD 27
            KISLK +I D+F N   NKLI   I  IF F +  ++
Sbjct: 906  KISLKNRIVDMFRNHICNKLIPSRICAIFEFVVCGFN 942


>AE014134-1921|AAF52979.2| 1073|Drosophila melanogaster CG31872-PA
            protein.
          Length = 1073

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 134  KISLK-KINDLFYNRQKNKLIKKNIYFIFHFSLLAYD 27
            KISLK +I D+F N   NKLI   I  IF F +  ++
Sbjct: 906  KISLKNRIVDMFRNHICNKLIPSRICAIFEFVVCGFN 942


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,321,004
Number of Sequences: 53049
Number of extensions: 341531
Number of successful extensions: 537
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)