Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0463
(479 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70309-10|CAA94361.2| 324|Caenorhabditis elegans Hypothetical p... 30 1.00
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 1.7
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 29 1.7
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr... 28 3.1
M38014-1|AAA28128.1| 108|Caenorhabditis elegans protein-tyrosin... 28 3.1
Z81550-5|CAB04479.1| 881|Caenorhabditis elegans Hypothetical pr... 28 4.0
AC024801-4|AAF59648.4| 485|Caenorhabditis elegans Hypothetical ... 28 4.0
U50069-2|AAB37558.1| 328|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z92817-4|CAB07297.3| 633|Caenorhabditis elegans Hypothetical pr... 27 9.3
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 27 9.3
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 27 9.3
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 27 9.3
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 27 9.3
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 27 9.3
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 27 9.3
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 27 9.3
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 27 9.3
>Z70309-10|CAA94361.2| 324|Caenorhabditis elegans Hypothetical
protein R102.7 protein.
Length = 324
Score = 29.9 bits (64), Expect = 1.00
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 224 DEMTSC-IVKSPKSVPHRHPQTWRNH*SSSCAKTL 325
D+MT +VK P S PH+ P T R H + S KT+
Sbjct: 250 DDMTQKKVVKKPSSRPHKKPSTTREH-TLSVQKTV 283
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 170 PTVESANNLSLVEKCAKVDEMTSCIVKSPKSVPHRHPQT 286
P+ + LS V+K + D +VK P S PH+ P T
Sbjct: 269 PSTTREHTLS-VQKTVEDDMTQKKVVKKPSSRPHKKPST 306
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 8 SINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 103
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 8 SINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 103
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 8 SINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 103
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical
protein K04D7.4 protein.
Length = 1159
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 258 FGDFTIQEVISSTFAHFSTRLKLLADSTVGKLCFKFKKHVLRFSVFCWKHSGPPSAM 88
FG++ + V ST AHFS R + D + K ++ V + W G PS++
Sbjct: 768 FGNYQVTLVSESTNAHFSHR---ILDLKIAKAVPAVERKVHQLHFMGWPDHGVPSSV 821
>M38014-1|AAA28128.1| 108|Caenorhabditis elegans protein-tyrosine
phophatase protein.
Length = 108
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 258 FGDFTIQEVISSTFAHFSTRLKLLADSTVGKLCFKFKKHVLRFSVFCWKHSGPPSAM 88
FG++ + V ST AHFS R + D + K ++ V + W G PS++
Sbjct: 34 FGNYQVTLVSESTNAHFSHR---ILDLKIAKAVPAVERKVHQLHFMGWPDHGVPSSV 87
>Z81550-5|CAB04479.1| 881|Caenorhabditis elegans Hypothetical
protein F55F3.4 protein.
Length = 881
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 268 WNTLRGFHDTGGHLINFCAFFNKAQVIG 185
W T+R F +T G +I C F K +IG
Sbjct: 812 WGTMRFFKNTTGLIIAQCKFLYKTLLIG 839
>AC024801-4|AAF59648.4| 485|Caenorhabditis elegans Hypothetical
protein Y50D7A.3a protein.
Length = 485
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 242 YRRSSHQLLRIFQQGSSYWRIPQWGSSVSNLKSM 141
Y R +LR+ QQG +R QW + + K++
Sbjct: 241 YHRKQLMMLRLIQQGKFEFRNEQWANITAEAKNL 274
>U50069-2|AAB37558.1| 328|Caenorhabditis elegans Hypothetical
protein C09B9.2 protein.
Length = 328
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +2
Query: 65 DGDRIALFIAEGGPECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTS 238
DGD+++L + C + K + P E +N LS +C K DEM S
Sbjct: 262 DGDKVSLSTSNTTQACIHVPNSSKKHKKRGSRSRSPHHEKSN-LSKYNRCQKQDEMLS 318
>Z92817-4|CAB07297.3| 633|Caenorhabditis elegans Hypothetical
protein W08G11.4 protein.
Length = 633
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 253 PEECSTPTPANMAESLIKFMRKDSPCHTALP 345
P E TP+ E L +++KD P T LP
Sbjct: 483 PAEGKEVTPSLFPEKLTDYLKKDGPNMTPLP 513
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 176 VESANNLSLVEKCAKVDEMTSCIVKSPKSVPHRHPQTWRNH*SSSCAKTLLATPLCPRQI 355
+ESA+N + K D +T I KSP +VP R +T R ++ T C +
Sbjct: 647 IESASNDYIKYDLQKPDVVT-IIDKSPPTVPSRKERTERTEVTTKLPSTRSINDPCDDEY 705
Query: 356 D 358
D
Sbjct: 706 D 706
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 176 VESANNLSLVEKCAKVDEMTSCIVKSPKSVPHRHPQTWRNH*SSSCAKTLLATPLCPRQI 355
+ESA+N + K D +T I KSP +VP R +T R ++ T C +
Sbjct: 861 IESASNDYIKYDLQKPDVVT-IIDKSPPTVPSRKERTERTEVTTKLPSTRSINDPCDDEY 919
Query: 356 D 358
D
Sbjct: 920 D 920
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 176 VESANNLSLVEKCAKVDEMTSCIVKSPKSVPHRHPQTWRNH*SSSCAKTLLATPLCPRQI 355
+ESA+N + K D +T I KSP +VP R +T R ++ T C +
Sbjct: 997 IESASNDYIKYDLQKPDVVT-IIDKSPPTVPSRKERTERTEVTTKLPSTRSINDPCDDEY 1055
Query: 356 D 358
D
Sbjct: 1056 D 1056
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 176 VESANNLSLVEKCAKVDEMTSCIVKSPKSVPHRHPQTWRNH*SSSCAKTLLATPLCPRQI 355
+ESA+N + K D +T I KSP +VP R +T R ++ T C +
Sbjct: 1046 IESASNDYIKYDLQKPDVVT-IIDKSPPTVPSRKERTERTEVTTKLPSTRSINDPCDDEY 1104
Query: 356 D 358
D
Sbjct: 1105 D 1105
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 176 VESANNLSLVEKCAKVDEMTSCIVKSPKSVPHRHPQTWRNH*SSSCAKTLLATPLCPRQI 355
+ESA+N + K D +T I KSP +VP R +T R ++ T C +
Sbjct: 1046 IESASNDYIKYDLQKPDVVT-IIDKSPPTVPSRKERTERTEVTTKLPSTRSINDPCDDEY 1104
Query: 356 D 358
D
Sbjct: 1105 D 1105
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 176 VESANNLSLVEKCAKVDEMTSCIVKSPKSVPHRHPQTWRNH*SSSCAKTLLATPLCPRQI 355
+ESA+N + K D +T I KSP +VP R +T R ++ T C +
Sbjct: 1038 IESASNDYIKYDLQKPDVVT-IIDKSPPTVPSRKERTERTEVTTKLPSTRSINDPCDDEY 1096
Query: 356 D 358
D
Sbjct: 1097 D 1097
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 176 VESANNLSLVEKCAKVDEMTSCIVKSPKSVPHRHPQTWRNH*SSSCAKTLLATPLCPRQI 355
+ESA+N + K D +T I KSP +VP R +T R ++ T C +
Sbjct: 1049 IESASNDYIKYDLQKPDVVT-IIDKSPPTVPSRKERTERTEVTTKLPSTRSINDPCDDEY 1107
Query: 356 D 358
D
Sbjct: 1108 D 1108
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 176 VESANNLSLVEKCAKVDEMTSCIVKSPKSVPHRHPQTWRNH*SSSCAKTLLATPLCPRQI 355
+ESA+N + K D +T I KSP +VP R +T R ++ T C +
Sbjct: 1050 IESASNDYIKYDLQKPDVVT-IIDKSPPTVPSRKERTERTEVTTKLPSTRSINDPCDDEY 1108
Query: 356 D 358
D
Sbjct: 1109 D 1109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,532,689
Number of Sequences: 27780
Number of extensions: 207207
Number of successful extensions: 564
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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