Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0462
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 52 4e-07
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 45 7e-05
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 42 5e-04
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 41 8e-04
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 40 0.001
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 40 0.003
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.004
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 38 0.010
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.014
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 37 0.018
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.024
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.024
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.032
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 35 0.073
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.096
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.22
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.29
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_49175| Best HMM Match : RVT_1 (HMM E-Value=1.8e-32) 32 0.39
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.51
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 31 0.68
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.68
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 31 0.68
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.90
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 1.2
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 2.1
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.7
SB_3903| Best HMM Match : RVT_1 (HMM E-Value=4.5e-17) 29 2.7
SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) 29 2.7
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 2.7
SB_37431| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 29 3.6
SB_56337| Best HMM Match : RVT_1 (HMM E-Value=1.7e-23) 29 3.6
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 29 3.6
SB_49427| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_19553| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 29 4.8
SB_17781| Best HMM Match : RVT_1 (HMM E-Value=1.3e-24) 29 4.8
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_45779| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.3
SB_30412| Best HMM Match : E-MAP-115 (HMM E-Value=2.8) 28 6.3
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 28 6.3
SB_18513| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 100 bits (240), Expect = 1e-21
Identities = 49/80 (61%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +1
Query: 10 VSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 186
+SKTA APIERVKLL+Q Q + K D YKG++D R + +G LSFWRGN AN I
Sbjct: 22 ISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLANCI 81
Query: 187 RYFPTQALNFAFKDKYKQVF 246
RYFPTQALNFAFKD+ K +F
Sbjct: 82 RYFPTQALNFAFKDQVKALF 101
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +3
Query: 327 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 500
SL FVY LD+ RTRLA D VGK G+R+F+G+ + K SDGL+GLYRGF +S GI
Sbjct: 127 SLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTIASDGLVGLYRGFVISCVGI 186
Query: 501 IIY 509
I+Y
Sbjct: 187 IVY 189
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +1
Query: 97 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 249
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 509 RASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYP 637
R YFG YDT + +L ++ +VIS+ + VT AG+ SYP
Sbjct: 190 RGFYFGLYDTLKPILLG-EDAGVVISFVLGYGVTVSAGLASYP 231
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/77 (42%), Positives = 55/77 (71%)
Frame = +1
Query: 10 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 189
VS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L +++GN NVIR
Sbjct: 47 VSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIR 100
Query: 190 YFPTQALNFAFKDKYKQ 240
FP A+ FA ++YK+
Sbjct: 101 IFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/96 (39%), Positives = 57/96 (59%)
Frame = +1
Query: 10 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 189
VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+ S WRGN ANVI+
Sbjct: 149 VSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGNGANVIK 202
Query: 190 YFPTQALNFAFKDKYKQVFLGGLTRRRSSGVTSLVI 297
P + F +K K++ +G T ++ GVT ++
Sbjct: 203 IAPESGIKFFAYEKAKKL-VGSDT--KALGVTDRLL 235
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +3
Query: 339 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIY 509
+YPL+ +TRLA + GQ + GL + S I++ +G+ YRG S+ GII Y
Sbjct: 248 IYPLEVLKTRLAI---RKTGQ--YRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPY 299
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/79 (25%), Positives = 43/79 (54%)
Frame = +1
Query: 13 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 192
S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+RG F +++
Sbjct: 244 SQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYRGLFPSLLGI 296
Query: 193 FPTQALNFAFKDKYKQVFL 249
P ++ A + K +L
Sbjct: 297 IPYAGIDLAVYETLKNFYL 315
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 342 YPLDFARTRLAADVG-KGDGQREFSGLGNCISKIFKSDGLIGLYRG 476
YPL RTRL A KG GQ + + + + KI DG GLYRG
Sbjct: 346 YPLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLYRG 389
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +1
Query: 10 VSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 165
+SKTA APIERVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 23 ISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 55 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 219
L+V V Q+ + G++ F + K +G+ +FW+GN + IR FP A+ +A
Sbjct: 79 LEVVKVLAQVGTQEAKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 10 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 189
++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G + +
Sbjct: 165 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPSFLG 221
Query: 190 YFP 198
FP
Sbjct: 222 LFP 224
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +1
Query: 25 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 204
+AP++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 205 ALNF 216
A+ F
Sbjct: 110 AVYF 113
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 97 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 216
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +1
Query: 19 TAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 198
TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG ++ P
Sbjct: 929 TAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSP 986
Query: 199 TQALNFAFKDKYKQVF 246
+A+ D + +F
Sbjct: 987 EKAIKLTTNDFVRGIF 1002
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 324 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 500
T VYP+D +TR+ + ++ + +C K+ +++G IGLYRG + G+
Sbjct: 926 TGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGV 984
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +3
Query: 324 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 503
T+ YPLD R RLA +++++GL N ++I++ +G+ YRG+ ++ GI+
Sbjct: 2 TAALLTYPLDMVRARLAI-----TQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIM 56
Query: 504 IY 509
Y
Sbjct: 57 PY 58
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +1
Query: 82 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 246
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +1
Query: 97 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 240
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
Score = 35.9 bits (79), Expect = 0.032
Identities = 15/41 (36%), Positives = 29/41 (70%)
Frame = +3
Query: 405 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYVPHTSV 527
++SG+G ++KI++ +GL G ++G G + I+ VP+T+V
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTN---IVRIVPYTAV 627
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 342 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 476
YPLD R R+ + +G+G ++S + I +S+G IGL++G
Sbjct: 700 YPLDVVRRRMQME--RGEGMFKYSSTWDGFKVIVRSEGFIGLFKG 742
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/71 (29%), Positives = 39/71 (54%)
Frame = +3
Query: 324 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 503
T+ V PLD +TRL + + G+ ++G+ +C KI+ ++GL Y+G +V +I
Sbjct: 218 TASVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKG---AVPRMI 273
Query: 504 IYVPHTSVSTT 536
+ P ++ T
Sbjct: 274 VIAPLFGIAQT 284
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 13 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 192
+ AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G +I
Sbjct: 219 ASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMIVI 275
Query: 193 FP 198
P
Sbjct: 276 AP 277
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = +3
Query: 324 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 503
TSLC YP + ARTRL + G++++ + + + +G GLY G G V I
Sbjct: 946 TSLC--YPHEVARTRLRQQESEFLGRQKYRSFFQTLGTVLREEGWRGLYGGLGTHV---I 1000
Query: 504 IYVPHTSV 527
VP+T++
Sbjct: 1001 RQVPNTAI 1008
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +1
Query: 10 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 168
++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 434 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 324 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSD-GLIGLYRGF 479
T+ YPLD R+RLA V + + G+ + +IF ++ G++ LYRGF
Sbjct: 11 TACSCTYPLDIVRSRLAFQVA---DEHTYCGICQTVKQIFMTEGGMVALYRGF 60
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 324 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL-IGLYRGFGVS 488
TS YPLD R R+ DG + +S N ++ DG+ GLYRG ++
Sbjct: 119 TSQTLAYPLDVVRRRMQLAGTVADGHK-YSTCINTFISVYTEDGIRRGLYRGLSIN 173
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 100 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 249
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +1
Query: 22 AVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 201
A P++ K +Q + I YKG +D RI + +G+ + W+G R P
Sbjct: 110 ASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPH 166
Query: 202 QALNFAFKDKYKQV---FLGG 255
L F F ++ + F GG
Sbjct: 167 TVLTFIFLEQLNRAANYFYGG 187
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/45 (31%), Positives = 31/45 (68%)
Frame = +3
Query: 345 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 479
P+D A+TR+ ++ DG+ E+ G + +++I +++G+ L++GF
Sbjct: 113 PVDIAKTRIQ-NMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGF 156
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 330 LCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII 503
+C +P ++ +T+L D + + + G +C+ K K G++GLYRG + G +
Sbjct: 55 ICCTFPTEYVKTQLQLD--EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSV 110
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +1
Query: 31 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 210
P E VK LQ+ + AA Y+G +D + K G+L +RG + + P ++
Sbjct: 60 PTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPKASV 115
Query: 211 NFA 219
FA
Sbjct: 116 RFA 118
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 109 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 243
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
Score = 35.1 bits (77), Expect = 0.055
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +3
Query: 324 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 479
T+ YPLD R+RLA V + G + CIS K G LY+GF
Sbjct: 77 TACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS--VKEGGPKALYKGF 126
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 342 YPLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 500
+PLD + RL G++ F+G +C K +++G GLY+G + G+
Sbjct: 45 HPLDTIKVRLQTMPRPKPGEKPMFTGTFDCAMKTIRNEGFFGLYKGMAAPITGV 98
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 28 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 168
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 360 RTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGFG 482
R + V K G + + GLG+C+ +++++ GL G+++G G
Sbjct: 183 RVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVFKGLG 224
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 112 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 237
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 35.1 bits (77), Expect = 0.055
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 10 VSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 168
+SK + P + +K +QVQ + Q+Y G+ D F I KE+G + ++G
Sbjct: 42 ISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 34.7 bits (76), Expect = 0.073
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 31 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 210
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 211 NFAFKDKYKQV 243
F F + K +
Sbjct: 281 FFGFYEFTKNL 291
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 34.3 bits (75), Expect = 0.096
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 333 CFVYPLDFARTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGF 479
C P+D RTR G+ + G +CI K + +G++ LY+GF
Sbjct: 227 CVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGF 276
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 10 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 168
+ P + VK+ Q + + I YK + AF +I K++G L W G
Sbjct: 127 IGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTG 175
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 130 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 243
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +1
Query: 130 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSG 279
+P+E +L W G ++VI F A+N F+D+YK++ L R R SG
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL----LRRMRRSG 184
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 31 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 207
P++ VK Q + +Y G D +I G+ +F +G A ++R FPT A
Sbjct: 377 PVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
Score = 31.5 bits (68), Expect = 0.68
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 399 QREFSGLGNCISKIFKSDGLIGLYRGFGVS 488
Q ++G +C+ K+F S+GL G +RG ++
Sbjct: 294 QMAYTGSLDCLKKVFHSEGLRGCFRGMAIT 323
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 327 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 476
S YP+D ++ AD G Q +++G +C+ KI+ S G+ +G
Sbjct: 371 SWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQG 422
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = +3
Query: 408 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 500
++G+ +C +I K + ++GLY+G + G+
Sbjct: 191 YNGVFDCFKQIIKRESVLGLYKGMASPLAGL 221
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Frame = +1
Query: 10 VSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGIVDAFVRIPKEQGLLSFW 162
+++ A PI+ K+ LQ+Q S +A+ D Y+G++ V + K +G+ + +
Sbjct: 27 IAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKTEGMKTMY 86
Query: 163 RGNFANVIRYFPTQALNFAFKDKYKQVF 246
+G + R ++ D+ K ++
Sbjct: 87 KGLIPGIHRQLCFASIRIGLYDQVKAMY 114
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 381 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SCQP 253
+ RD RS+ +R++ RWL R R+P S+ R++S SC P
Sbjct: 6 NNNRDN-TRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSCSP 48
>SB_49175| Best HMM Match : RVT_1 (HMM E-Value=1.8e-32)
Length = 823
Score = 32.3 bits (70), Expect = 0.39
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +2
Query: 452 RSDRSVQRFRCVRARYHHLRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIIS 631
+S+ S+Q + Y + +FG+ + G+ PDPK V++ QT++T + +
Sbjct: 631 KSEGSLQTLNKSKCEYGKEKLEFFGYVFSKDGISPDPKKVEDVVN---LQTLSTASE--T 685
Query: 632 YPFRHSP*AHDDAVWSW 682
P R S H D W W
Sbjct: 686 TPPRAS---HYDQPWCW 699
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +1
Query: 31 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 210
P++ +K+ LQ + K +KG +D F++ + +GL ++G + ++ P+ AL
Sbjct: 40 PLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPSTAL 98
Query: 211 NF 216
F
Sbjct: 99 TF 100
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 345 PLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYVPHT 521
PLD + RL A G+ F G +C K + +GL GLY+G + +++ P T
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKGM---LSPLLMATPST 96
Query: 522 SVS 530
+++
Sbjct: 97 ALT 99
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 130 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSGV 282
+P+E L + G ++VI F A+N F+++YK+VF R R+S V
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNSAV 313
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 345 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVS 488
PLD R + + K G + G +C+ +I++ G+ G+Y+G V+
Sbjct: 157 PLD--RVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 25 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 198
+ P++RVK +LQ++ + Y G VD RI +E G+ ++G +R P
Sbjct: 155 LTPLDRVKCILQIE----KAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVTAMRDIP 208
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 31 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 210
P++ +K+ LQ + K YK D F +I + +G+ +RG ++ P +
Sbjct: 58 PLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRGVTVPILNSIPNTTV 116
Query: 211 NFA 219
F+
Sbjct: 117 LFS 119
>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
Length = 383
Score = 31.5 bits (68), Expect = 0.68
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 423 NCISKIFKSDGLIGLYRGFGVSVQGIIIY 509
+C I++ +G+ G YRGFG + ++Y
Sbjct: 332 DCFRTIYQQEGIFGFYRGFGALLIQCVVY 360
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +1
Query: 10 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 189
V+ + P++ V+ L VQ +S + ++ Y GIV A RI E+G+ ++G +++
Sbjct: 41 VATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLYKGLVPSLVS 98
Query: 190 YFP 198
P
Sbjct: 99 IAP 101
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 13 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 171
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 25 VAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 198
+ P E +K LQ QH + I+ K G++D ++I + G +RG A R P
Sbjct: 124 LCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVP 182
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 106 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 243
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 51 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 152
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 51 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 152
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 22 AVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 201
A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R + P
Sbjct: 14 AMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPF 65
Query: 202 QALNFAFKDKYKQVF--LGG 255
Q L+F + ++ LGG
Sbjct: 66 QTLHFTVYEYARKALNPLGG 85
>SB_3903| Best HMM Match : RVT_1 (HMM E-Value=4.5e-17)
Length = 609
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 428 HQQDLQVRRSDRSVQRFRCVRARYHHLRASYFGFYDTARGMLPDPKNTPI 577
H+ ++RS +F +A+ SY G TA G+ PDP+ +P+
Sbjct: 524 HKMIAVLKRSREIGLKFNPRKAKLRVPEVSYVGHLFTADGLKPDPEKSPM 573
>SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 272
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 418 RPENSRWPSPLPTSAARRVRAKSRGYTK 335
RP +SR S P+SA+RR ++SRG +
Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 51 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 152
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_37431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 643
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/88 (26%), Positives = 40/88 (45%)
Frame = +2
Query: 419 RKLHQQDLQVRRSDRSVQRFRCVRARYHHLRASYFGFYDTARGMLPDPKNTPIVISWAIA 598
R L ++R ++ + +C Y + +FG+ + G+ PDPK V++
Sbjct: 146 RNLRAVFKRLREKGLTLNKSKC---EYGKKKLEFFGYVFSKDGISPDPKKVKDVVN---L 199
Query: 599 QTVTTVAGIISYPFRHSP*AHDDAVWSW 682
QT++T + + P R S H D W W
Sbjct: 200 QTLSTASE--TTPPRPS---HYDQPWCW 222
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 51 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 152
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_56337| Best HMM Match : RVT_1 (HMM E-Value=1.7e-23)
Length = 846
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +2
Query: 416 SRKLHQQDLQVRRSDRSVQRFRCVRARYHHLRASYFGFYDTARGMLPDPKNTPIVISW-- 589
+R L ++R ++ + +C Y + +FG+ + G+ PDPK V++
Sbjct: 477 NRNLRAVFKRLREKGLTLNKSKC---EYGKEKLEFFGYVFSKNGISPDPKKVEDVVNLQT 533
Query: 590 -AIAQTVTTVAGIISYPFRHSP 652
+ A V ++ G+ +Y R P
Sbjct: 534 PSTASEVRSLLGMTNYCSRFIP 555
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 130 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSG 279
+P+E +L + G ++VI F A+N FK++YK++ T R G
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEG 316
>SB_49427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1958
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/55 (21%), Positives = 24/55 (43%)
Frame = +2
Query: 425 LHQQDLQVRRSDRSVQRFRCVRARYHHLRASYFGFYDTARGMLPDPKNTPIVISW 589
LH+ + ++R + + + ++ +Y G T G+ PDPK + W
Sbjct: 560 LHRLEAVLQRLSEFGLKLKPSKCKFFQTELAYLGHVVTREGVKPDPKKVEALEEW 614
>SB_19553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1744
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +2
Query: 419 RKLHQQDLQVRRSDRSVQRFRCVRARYHHLRASYFGFYDTARGMLPDPKNTPIVISW--- 589
R L ++R ++ + +C +Y + +FG+ + G+ PDPK V++
Sbjct: 1071 RNLRAVFKRLREKGLTLNKSKC---KYGKEKLEFFGYVFSKDGISPDPKKVEDVVNLQTP 1127
Query: 590 AIAQTVTTVAGIISYPFRHSP 652
+ A V ++ G+ +Y R P
Sbjct: 1128 STASEVRSLLGMTNYCSRFIP 1148
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 505 MMIPCTDTPKPLYRPIRPSDLKILLMQ 425
+++PC P LYR +RP L+I + Q
Sbjct: 587 IILPCPSDPCSLYRELRPQALQIQMSQ 613
>SB_17781| Best HMM Match : RVT_1 (HMM E-Value=1.3e-24)
Length = 460
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +2
Query: 419 RKLHQQDLQVRRSDRSVQRFRCVRARYHHLRASYFGFYDTARGMLPDPKNTPIVISW--- 589
R L ++R ++ + +C +Y + +FG+ + G+ PDPK V++
Sbjct: 221 RNLRAVFKRLREKGLTLNKSKC---KYGKEKLEFFGYVFSKDGISPDPKKVEDVVNLQTP 277
Query: 590 AIAQTVTTVAGIISYPFRHSP 652
+ A V ++ G+ +Y R P
Sbjct: 278 STASEVRSLLGMTNYCSRFIP 298
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 133 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 249
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_45779| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 946
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Frame = +2
Query: 443 QVRRSDRSVQRFR-------CVRARYHHLRASYFGFYDTARGMLPDPKNTPIVISWAIAQ 601
Q++R +R +Q+ R + ++ R +Y G +A G+ DP T V W +
Sbjct: 189 QLQRLERVLQKLREHGLKIEPAKCQFFQSRVTYLGHAVSADGVSSDPAKTETVACWPTPR 248
Query: 602 TVTTVAGIISY 634
T+ + + +
Sbjct: 249 TLKELRSFLGF 259
>SB_30412| Best HMM Match : E-MAP-115 (HMM E-Value=2.8)
Length = 492
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = +3
Query: 12 LQDRRSTHRACQAAAPSTARQQADRRRPALQGYRRRLRAHPQGAGSPFILAW*LRQRHQV 191
LQ + HR + A+Q+ R+ LQG R R + +G+ W R+R +
Sbjct: 270 LQGKGGRHRGNGEGSVVNAQQEWKERQKELQGKGGRHRGNGEGSALNVQQEW--RERQKE 327
Query: 192 LPDPGAQLRLQGQVQA 239
L G + R G+ A
Sbjct: 328 LQGKGGRHRGNGEGSA 343
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +3
Query: 12 LQDRRSTHRACQAAAPSTARQQADRRRPALQGYRRRLRAHPQGAGSPFILAW*LRQRHQV 191
LQ + HR + A+Q+ R+ LQG R R + +G+ W R+R +
Sbjct: 357 LQGKGGRHRGNGEGSVVNAQQEWRERQKELQGKGGRHRGNGEGSAVNAQQEW--RERQKE 414
Query: 192 LPDPGAQLRLQGQVQA 239
L G + R +G+ A
Sbjct: 415 LQGKGGRHRGKGEGSA 430
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 51 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 152
A+ S RQQ R RP +GY +R R +P+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_18513| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4634
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +3
Query: 396 GQREFSGLGNCISKIFK-SDGLIGLYRGFGVSVQGIIIYVPHT---SVSTTRPAA 548
G R SGLGN ++ I +DG+ G GF S Q ++ T SV T PAA
Sbjct: 1721 GSRVASGLGNNLTVIISANDGVAGQV-GFSQSSQSVVAKEGTTVNLSVERTAPAA 1774
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,643,053
Number of Sequences: 59808
Number of extensions: 418532
Number of successful extensions: 1777
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1766
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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