Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0461
         (696 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54G20 Cluster: Putative uncharacterized protein; n=1; ...    38   0.31 
UniRef50_A0EG91 Cluster: Chromosome undetermined scaffold_95, wh...    34   3.8  
UniRef50_A2FRR3 Cluster: Clan SC, family S28, unassigned serine ...    33   5.1  
UniRef50_P54787 Cluster: Vacuolar protein sorting-associated pro...    33   8.8  

>UniRef50_Q54G20 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1026

 Score = 37.5 bits (83), Expect = 0.31
 Identities = 20/53 (37%), Positives = 31/53 (58%)
 Frame = +2

Query: 11  TIVINNNLDN*IRHSNFFLNNFHYTSLIWSIDFEVYLYIENFLRFFRKFTVYE 169
           T  INNN+ N + +S  F NNF + S+  +++F  Y  I N+L+ +  F V E
Sbjct: 157 TTNINNNISNLLGYSESFNNNFEFYSITITLNFNFYNSILNYLKNY-SFRVNE 208


>UniRef50_A0EG91 Cluster: Chromosome undetermined scaffold_95, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_95,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1384

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = -3

Query: 241 F*NINFDVYYDNFSHFSENFKKKYLVNREFPKKS*KVFYI*INFKI 104
           F N NF +Y   F  + ENFKKK+LV + F   +  + Y  +NF I
Sbjct: 869 FSNGNFGIYLKKFEQY-ENFKKKHLVQQSFKSSTQCINY--LNFHI 911


>UniRef50_A2FRR3 Cluster: Clan SC, family S28, unassigned serine
           peptidase; n=3; Trichomonas vaginalis G3|Rep: Clan SC,
           family S28, unassigned serine peptidase - Trichomonas
           vaginalis G3
          Length = 504

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 226 FDVYYDNFSHFSENFKKKYLVNREFPKKS 140
           FD   D+FS  +E FK++Y +N  + KKS
Sbjct: 30  FDQKLDHFSDLAETFKQRYYINTNYSKKS 58


>UniRef50_P54787 Cluster: Vacuolar protein sorting-associated
           protein 9; n=3; Saccharomyces cerevisiae|Rep: Vacuolar
           protein sorting-associated protein 9 - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 451

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +2

Query: 44  IRHSNFFLNNFHYTSLIWSIDFEVYLYIENFLRF-FRKFTVYE 169
           ++++  FL NF    L+W++  E+ L I +F  F + KFT+YE
Sbjct: 79  VKYTKSFLRNFLAQRLLWTVSEEIKL-ISDFKTFIYDKFTLYE 120


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,182,807
Number of Sequences: 1657284
Number of extensions: 14780577
Number of successful extensions: 32790
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32788
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)