Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0461
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    24   1.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.3  

>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 250 SCRRYNSAAVDNSRRLPKYV 309
           +C R +S  V N+RR+ +YV
Sbjct: 63  NCERCDSRQVANARRIARYV 82


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 608 PYLRHCGKSNPSGIALRFFIYTLAVGQTRSR 516
           PYLR  G      +A +FF+Y  ++  +  R
Sbjct: 295 PYLRVGGNKQFEMMADQFFVYDASITASLGR 325


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 608 PYLRHCGKSNPSGIALRFFIYTLAVGQTRSR 516
           PYLR  G      +A +FF+Y  ++  +  R
Sbjct: 302 PYLRVGGNKQFEMMADQFFVYDASITASLGR 332


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 263 YRRHDKRVLKYQL*R 219
           Y+RH KR+L Y L R
Sbjct: 126 YKRHKKRLLCYLLAR 140


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 263 YRRHDKRVLKYQL*R 219
           Y+RH KR+L Y L R
Sbjct: 144 YKRHKKRLLCYLLAR 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,647
Number of Sequences: 336
Number of extensions: 3837
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)