Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0461
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         24   5.3  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   7.0  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   7.0  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.0  

>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +1

Query: 343 LGTTSTGHRNYID-FLHKKKRIL 408
           +GTT+ G RNY+D F H  + ++
Sbjct: 97  VGTTAGGCRNYLDTFWHNPQYVI 119


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +2

Query: 557 TEVQCRKGYSSRSAGDKAESHWGRGKLPLI*PNSA 661
           TE     GY SR+ G+ A S       P   PN A
Sbjct: 8   TEAMSDSGYDSRTDGNGAASSCNNSLNPRTPPNCA 42


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +2

Query: 557 TEVQCRKGYSSRSAGDKAESHWGRGKLPLI*PNSA 661
           TE     GY SR+ G+ A S       P   PN A
Sbjct: 8   TEAMSDSGYDSRTDGNGAASSCNNSLNPRTPPNCA 42


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +2

Query: 422  NRTGSDIKPNHTPFSTSRVVGSTHLLLLFIFNVILSALPLECI 550
            NRTG+D++     F+ SR       +   ++     AL + CI
Sbjct: 2811 NRTGADLRAGSLTFTGSRDAKRPSKISSSLYQATFLALRVLCI 2853


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,340
Number of Sequences: 2352
Number of extensions: 15360
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)