Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0459
(696 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 156 6e-37
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 151 1e-35
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 151 2e-35
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 148 1e-34
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 146 3e-34
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 145 8e-34
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 144 2e-33
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 142 7e-33
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 141 2e-32
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 137 2e-31
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 132 6e-30
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 126 4e-28
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 126 4e-28
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 123 5e-27
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 122 1e-26
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 119 8e-26
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 79 4e-25
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 113 5e-24
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 112 7e-24
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 109 6e-23
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 105 8e-22
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 102 7e-21
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 102 7e-21
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 101 2e-20
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 98 2e-19
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 98 2e-19
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 98 2e-19
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 98 2e-19
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 97 3e-19
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 94 3e-18
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 93 4e-18
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 93 6e-18
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 93 6e-18
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 91 2e-17
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 89 1e-16
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 89 1e-16
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 88 2e-16
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 87 3e-16
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 87 5e-16
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 85 1e-15
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 85 2e-15
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 84 3e-15
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 83 5e-15
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 82 1e-14
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 81 3e-14
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 81 3e-14
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 81 3e-14
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 81 3e-14
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 80 6e-14
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 78 2e-13
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 78 2e-13
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 78 2e-13
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 76 7e-13
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 76 7e-13
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 76 1e-12
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 76 1e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 75 2e-12
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 75 2e-12
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 73 5e-12
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 73 7e-12
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 71 2e-11
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 71 3e-11
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 71 4e-11
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 69 8e-11
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 69 8e-11
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 69 1e-10
UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46; N... 67 3e-10
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 67 4e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 67 4e-10
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 65 1e-09
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 64 3e-09
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 64 3e-09
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 64 4e-09
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 63 5e-09
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 62 1e-08
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 62 1e-08
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 61 2e-08
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 61 3e-08
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 60 7e-08
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 58 2e-07
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 58 2e-07
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 58 2e-07
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 58 3e-07
UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21; Pro... 57 4e-07
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 56 8e-07
UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71; P... 52 1e-05
UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyc... 50 5e-05
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 49 1e-04
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 48 2e-04
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 48 3e-04
UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79; Pte... 47 4e-04
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 47 5e-04
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 46 7e-04
UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39; Aph... 45 0.002
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 45 0.002
UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4; Tali... 41 0.025
UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14; Neo... 41 0.033
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 40 0.044
UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5; Euma... 40 0.044
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 40 0.058
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 39 0.10
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 39 0.10
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 39 0.13
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 38 0.18
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 38 0.24
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 38 0.24
UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21; A... 38 0.24
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 37 0.54
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 36 0.72
UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI pro... 36 1.3
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 36 1.3
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 34 2.9
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 33 5.1
UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26; E... 33 5.1
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 33 5.1
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 33 5.1
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 33 6.7
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 33 8.8
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 156 bits (378), Expect = 6e-37
Identities = 77/141 (54%), Positives = 97/141 (68%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
TVG+D+D RAYFTSA +I+A+PTG+K+F LAT+ + + F +GGL
Sbjct: 294 TVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGL 353
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TG++LANSS+DI LHDTYYVVAHFHYVLS ++ +PL TG +LNS KI
Sbjct: 354 TGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNSVWTKIH 413
Query: 317 FFTIFIGVNITFFPQHFLGLA 255
F +FIGVN+TFFPQHFLGLA
Sbjct: 414 FGVMFIGVNLTFFPQHFLGLA 434
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 151 bits (367), Expect = 1e-35
Identities = 75/141 (53%), Positives = 96/141 (68%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
TVG+D+D RAYFTSA +I+A+PTG+K+F LAT+ + + F +GGL
Sbjct: 294 TVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGL 353
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TG++LANSS+DI LHDTYYVVAHFHYVLS ++ +PL TG +L+ KI
Sbjct: 354 TGIVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHDTWTKIH 413
Query: 317 FFTIFIGVNITFFPQHFLGLA 255
F +FIGVN+TFFPQHFLGLA
Sbjct: 414 FGVMFIGVNLTFFPQHFLGLA 434
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 151 bits (365), Expect = 2e-35
Identities = 74/141 (52%), Positives = 97/141 (68%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
TVG+D+D RAYFTSA +I+A+PTG+K+F LAT+ ++ + F +GGL
Sbjct: 294 TVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGL 353
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TG++LANSS+DI LHDTYYVVAHFHYVLS I+ +PL +G +L+ KI
Sbjct: 354 TGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIH 413
Query: 317 FFTIFIGVNITFFPQHFLGLA 255
F +FIGVN+TFFPQHFLGL+
Sbjct: 414 FTIMFIGVNLTFFPQHFLGLS 434
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 148 bits (359), Expect = 1e-34
Identities = 74/133 (55%), Positives = 91/133 (68%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
TVG+D+D RAYFTSA +I+AVPTGIK+F LAT P + F +GGL
Sbjct: 207 TVGMDVDTRAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGL 266
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TGV+LANSS+DI LHDTYYVVAHFHYVLS + +PL TG++LN++ LKIQ
Sbjct: 267 TGVVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGIVQWFPLFTGVTLNNFFLKIQ 326
Query: 317 FFTIFIGVNITFF 279
F +FIGVN+TFF
Sbjct: 327 FIIMFIGVNLTFF 339
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 146 bits (355), Expect = 3e-34
Identities = 74/140 (52%), Positives = 91/140 (65%)
Frame = -2
Query: 674 VGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLT 495
VG+ + PRAYFTSA +I+A+PTGIK F LAT + P + F +GGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 494 GVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQF 315
G++LANSS+DI LHDTYYVVAHFHYVLS + +PL TG +LN+ K F
Sbjct: 356 GIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNNAWAKAHF 415
Query: 314 FTIFIGVNITFFPQHFLGLA 255
+F GVN+TFFPQHFLGLA
Sbjct: 416 GVMFTGVNLTFFPQHFLGLA 435
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 145 bits (352), Expect = 8e-34
Identities = 73/141 (51%), Positives = 92/141 (65%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
T+G+D+D RAYFTSA +I+A+PTGIKIF +AT + F +GGL
Sbjct: 278 TIGMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGL 337
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TGV+L+NSS+D+ LHDTYY VAHFHYVLS I +P+ GL +N Y LKI
Sbjct: 338 TGVVLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGFIYWFPMFFGLMMNEYFLKIH 397
Query: 317 FFTIFIGVNITFFPQHFLGLA 255
F+ FIGVN+ FFPQHFLGL+
Sbjct: 398 FYLTFIGVNLIFFPQHFLGLS 418
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 144 bits (348), Expect = 2e-33
Identities = 74/140 (52%), Positives = 87/140 (62%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
TVG+D+D RAYFT+A +I+AVPTGIKIF LAT S P + F IGGL
Sbjct: 294 TVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTIGGL 353
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
+GV+LAN+S+DI HDTYYVVAHFHYVLS P GL N K
Sbjct: 354 SGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKILGLDYNLLYSKAH 413
Query: 317 FFTIFIGVNITFFPQHFLGL 258
F+ +F GVN+TFFPQHFLGL
Sbjct: 414 FWVLFTGVNLTFFPQHFLGL 433
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 142 bits (344), Expect = 7e-33
Identities = 75/141 (53%), Positives = 91/141 (64%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
TVG+D+D RAYFT+A +I+AVPTGIKIF +ATI S L I F IGGL
Sbjct: 301 TVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTIGGL 360
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TG++LANS +DI+LHDTYYVVAHFHYVLS + TGL + +I
Sbjct: 361 TGIVLANSGLDISLHDTYYVVAHFHYVLSMGAVFAIFAGFYYWFGKITGLQYPETLGQIH 420
Query: 317 FFTIFIGVNITFFPQHFLGLA 255
F++ FIGVN+TF P HFLGLA
Sbjct: 421 FWSTFIGVNLTFMPMHFLGLA 441
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 141 bits (341), Expect = 2e-32
Identities = 72/140 (51%), Positives = 90/140 (64%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
TVG+D+D RAYFT+A +I+A+PTG+KIF LAT S + F + IGGL
Sbjct: 320 TVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGGL 379
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
+GV+LAN+S +I HDTYYVVAHFHYVLS P GLS ++ KI
Sbjct: 380 SGVVLANASENIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKIIGLSYDTKASKIH 439
Query: 317 FFTIFIGVNITFFPQHFLGL 258
F+ +FIGVN+TFFPQHFLGL
Sbjct: 440 FWILFIGVNLTFFPQHFLGL 459
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 137 bits (332), Expect = 2e-31
Identities = 76/142 (53%), Positives = 93/142 (65%), Gaps = 2/142 (1%)
Frame = -2
Query: 674 VGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFG-IFIH-IGG 501
VG+D+D RAYFT+A +I+AVPTGIKIF LAT+ + L M G IF+ IGG
Sbjct: 260 VGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWALGFIFLFTIGG 319
Query: 500 LTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKI 321
LTG++L+NSS+DI LHDTYYVVAHFHYVLS + TG + I
Sbjct: 320 LTGIVLSNSSLDILLHDTYYVVAHFHYVLSMGAVFAIFGGFYLWFGKITGYAYKDIYGLI 379
Query: 320 QFFTIFIGVNITFFPQHFLGLA 255
F+ +F+GVNITFFPQHFLGLA
Sbjct: 380 HFWLMFLGVNITFFPQHFLGLA 401
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 132 bits (320), Expect = 6e-30
Identities = 72/143 (50%), Positives = 90/143 (62%), Gaps = 2/143 (1%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LY--P*YFMKIRFGIFIHIG 504
TVG+D+D RAYFT+A +I+AVPTGIKIF +AT+ W + Y P F + F IG
Sbjct: 296 TVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATM-WGGSIQYKTPMLFA-VGFIFLFTIG 353
Query: 503 GLTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILK 324
GLTG++LANS +DI LHDTYYVVAHFHYVLS G + + +
Sbjct: 354 GLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQ 413
Query: 323 IQFFTIFIGVNITFFPQHFLGLA 255
I F+ F GVN+TFFP HFLGL+
Sbjct: 414 IHFWITFFGVNLTFFPMHFLGLS 436
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 126 bits (305), Expect = 4e-28
Identities = 61/139 (43%), Positives = 86/139 (61%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
T GID +AYFT+A +++A+PTGIK+F +AT+ S +Y + F + IGG+
Sbjct: 297 TSGIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYFAAGFVVLFTIGGI 356
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TG+IL+N+ +D ++HDT+YVV HFHYVLS + TGLS + + +
Sbjct: 357 TGIILSNAGIDTSIHDTHYVVGHFHYVLSMGAVFAIYGGFYYWWGKMTGLSYSESLGQAH 416
Query: 317 FFTIFIGVNITFFPQHFLG 261
F+ FIGVN TFFP HFLG
Sbjct: 417 FWMTFIGVNFTFFPMHFLG 435
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 126 bits (305), Expect = 4e-28
Identities = 65/141 (46%), Positives = 87/141 (61%), Gaps = 3/141 (2%)
Frame = -2
Query: 671 GIDMDPRAYFTSAPIIMAVPTGIKIFR*LATI---PWNSN*LYP*YFMKIRFGIFIHIGG 501
G+D+D RAYFT+A +++AVPTG+K+F LATI ++ +P F I + IGG
Sbjct: 299 GLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVLLFTIGG 358
Query: 500 LTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKI 321
LTGVILAN+++ LHD+YYVVAHFHYVLS +P TG+ ++
Sbjct: 359 LTGVILANAALSTLLHDSYYVVAHFHYVLSMGAVFAIFGGFWFWFPFWTGMVPRKDLVLT 418
Query: 320 QFFTIFIGVNITFFPQHFLGL 258
F FIGVN TFFP H++GL
Sbjct: 419 HFMLTFIGVNFTFFPMHWMGL 439
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 123 bits (296), Expect = 5e-27
Identities = 61/141 (43%), Positives = 84/141 (59%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
T G+ ++ + YFT+A +++AVPTGIKIF +ATI S + F +GG+
Sbjct: 336 TTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTVGGV 395
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TGV+LAN +D LHDTYYVVAHFHYVLS +P +G N ++ ++
Sbjct: 396 TGVVLANGGVDDVLHDTYYVVAHFHYVLSLGAVFGLFAGFYYWFPKMSGKMYNEFLGQLH 455
Query: 317 FFTIFIGVNITFFPQHFLGLA 255
F+ F GVN+ FFP HFLGL+
Sbjct: 456 FWVFFAGVNLLFFPMHFLGLS 476
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 122 bits (293), Expect = 1e-26
Identities = 58/140 (41%), Positives = 83/140 (59%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
T G+D+D R YF++A +I+A+P+ +KIF L T ++ + P + F +GGL
Sbjct: 304 TAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTVGGL 363
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
+G+IL+ +S+DI LHDTYYVVAHFHY LS P G+S +S ++
Sbjct: 364 SGIILSAASLDIILHDTYYVVAHFHYTLSLGAIYGIFCGFCLWLPYMYGISFDSVMMMAV 423
Query: 317 FFTIFIGVNITFFPQHFLGL 258
F F+G N+TFFP HF GL
Sbjct: 424 FVCFFVGTNMTFFPMHFAGL 443
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 119 bits (286), Expect = 8e-26
Identities = 61/126 (48%), Positives = 82/126 (65%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
TVG+D+D RAYFTSA +I+A+PTG+K+F LAT+ S + F +GGL
Sbjct: 59 TVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGL 118
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TG+ILANSS+DI LHDTYYVVAHFHYVLS ++ +PL +G +L++ KI
Sbjct: 119 TGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLHNTWTKIH 178
Query: 317 FFTIFI 300
F +F+
Sbjct: 179 FGVMFM 184
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 79.4 bits (187), Expect(2) = 4e-25
Identities = 47/96 (48%), Positives = 58/96 (60%), Gaps = 14/96 (14%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
TVG+D+D RAYFT+A +I+AVPTGIKIF LAT S + P + F IGGL
Sbjct: 353 TVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFTIGGL 412
Query: 497 --------------TGVILANSSMDITLHDTYYVVA 432
+GV+LAN+S+DI HDTYYVVA
Sbjct: 413 LNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 58.4 bits (135), Expect(2) = 4e-25
Identities = 28/65 (43%), Positives = 36/65 (55%)
Frame = -2
Query: 452 DTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGVNITFFPQ 273
+T + HFHYVLS P G + + + K+QF+ +FIGVN TFFPQ
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWLLFIGVNATFFPQ 535
Query: 272 HFLGL 258
HFLGL
Sbjct: 536 HFLGL 540
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 113 bits (271), Expect = 5e-24
Identities = 55/113 (48%), Positives = 76/113 (67%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
TVG+D+D RAYFT+A +I+AVPTGIK+F +AT+ ++ F + F +GGL
Sbjct: 271 TVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVFLFTLGGL 330
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLN 339
TG++LANSS+D+ LHDTYYVVAHFHYVLS + +PL +G +L+
Sbjct: 331 TGIVLANSSIDVVLHDTYYVVAHFHYVLSMGAVFAIFAGFTHWFPLFSGYNLH 383
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 112 bits (270), Expect = 7e-24
Identities = 57/109 (52%), Positives = 68/109 (62%)
Frame = -2
Query: 581 TIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSMDITLHDTYYVVAHFHYVLSXXX 402
TI W+ P + F +GGLTG++LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 332 TIKWD-----PPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGA 386
Query: 401 XXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLA 255
+ +PL TG +LNS K F +F GVN+TFFPQHFLGLA
Sbjct: 387 VFAILAGFTHWFPLFTGYTLNSAWAKAHFGVMFTGVNLTFFPQHFLGLA 435
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 109 bits (262), Expect = 6e-23
Identities = 57/139 (41%), Positives = 77/139 (55%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
TVG+ + +AYF A +++AVPTGIKIF +AT+ S + F +GG
Sbjct: 399 TVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTLGGT 458
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TG+IL+ + +D HDTYYVVAHFHYV+S +G + ++
Sbjct: 459 TGIILSQAGVDRAYHDTYYVVAHFHYVMSLGAVFGIFAAVYYWIGKMSGRQYPEWAGQVH 518
Query: 317 FFTIFIGVNITFFPQHFLG 261
F+ FIG NITFFPQHFLG
Sbjct: 519 FWVFFIGTNITFFPQHFLG 537
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 105 bits (253), Expect = 8e-22
Identities = 58/138 (42%), Positives = 72/138 (52%)
Frame = -2
Query: 668 IDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGV 489
+ + RAYFTSA +I+AVPTGIKIF LAT+ P + F +GGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 488 ILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFT 309
+LANSS+DI LHDTYYVVAHFHYVLS P + ++K F
Sbjct: 61 VLANSSLDIVLHDTYYVVAHFHYVLSMGACICYYVSIYPLMPFINWVINKPLMIKNSIFN 120
Query: 308 IFIGVNITFFPQHFLGLA 255
FP FL ++
Sbjct: 121 NIFSCKFNIFPPTFLSIS 138
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 102 bits (245), Expect = 7e-21
Identities = 54/140 (38%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Frame = -2
Query: 674 VGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATI-PWNSN*LYP*YFMKIRFGIFIHIGGL 498
VG D +F+S +I+ VPTGIK+F L + L P + + F +GG+
Sbjct: 385 VGFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLFTVGGV 444
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TGV L+ S++DI HDT++VVAHFHYVLS + +P G SLN Y+L+
Sbjct: 445 TGVALSASALDILFHDTWFVVAHFHYVLSLGSYSSIVIMLVWWWPFIVGYSLNKYLLQGH 504
Query: 317 FFTIFIGVNITFFPQHFLGL 258
+ +G N+ FFP H+LG+
Sbjct: 505 WLLSMVGFNLCFFPMHYLGI 524
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 102 bits (245), Expect = 7e-21
Identities = 54/141 (38%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LAT-IPWNSN*LYP*YFMKIRFGIFIHIGG 501
T G+++D RAYFTS I++++PTG K+F + T + N ++ + + F GG
Sbjct: 299 TTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFTFGG 358
Query: 500 LTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSL-NSYILK 324
TGVIL N+++D+ LHDTYYV+AHFH+VLS G +L + I+
Sbjct: 359 TTGVILGNAAIDVALHDTYYVIAHFHFVLSIGAIIGLFTTVSAFQDNFFGKNLRENSIVI 418
Query: 323 IQFFTIFIGVNITFFPQHFLG 261
+ F+GV +TF P HFLG
Sbjct: 419 LWSMLFFVGVILTFLPMHFLG 439
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 101 bits (242), Expect = 2e-20
Identities = 54/141 (38%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LAT-IPWNSN*LYP*YFMKIRFGIFIHIGG 501
T G+++D RA+FTS I++++PTG K+F L T + N + + + F GG
Sbjct: 3 TTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLLSLLFICTFTFGG 62
Query: 500 LTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSL-NSYILK 324
TGVIL N ++D+ LHDTYYV+AHFH+VLS G +L + I+
Sbjct: 63 TTGVILGNGAIDVALHDTYYVIAHFHFVLSIGAIIALFTSVSFFQESFFGKTLRENTIIV 122
Query: 323 IQFFTIFIGVNITFFPQHFLG 261
+ F+GV +TF P HFLG
Sbjct: 123 LWSILFFVGVVLTFLPMHFLG 143
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 98.3 bits (234), Expect = 2e-19
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Frame = -2
Query: 650 AYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFM-KIRFGIFIHIGGLTGVILANS 474
++FT++ + +AVP G++IF LATI W ++ F+ I F + IGGLTGV++A+
Sbjct: 318 SFFTASSMAIAVPAGLQIFCWLATI-WAGRPIFKTPFLFVIGFIVVFVIGGLTGVMVASV 376
Query: 473 SMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGV 294
D +HDTY+VVAHFHYVL +P TG ++ + + F IF G
Sbjct: 377 PFDTQVHDTYFVVAHFHYVLVGGAVFPLLGAIYYWFPKLTGRMMSETLGRWSFGLIFSGF 436
Query: 293 NITFFPQHFLGL 258
N+TFFP H LGL
Sbjct: 437 NLTFFPMHILGL 448
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 98.3 bits (234), Expect = 2e-19
Identities = 48/139 (34%), Positives = 83/139 (59%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
TVG+D+D R YF+SA +++A+PT IK+F + + + +++ + F + +GG+
Sbjct: 51 TVGLDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWYV-VAFLLMFLLGGV 109
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TG++LANS +D+ +HD+YYVVAHFHYVLS ++ + L +G +++L++Q
Sbjct: 110 TGLVLANSEVDLVMHDSYYVVAHFHYVLSLGAVFGLLNGVLSCHELCSGYRSAAWLLRVQ 169
Query: 317 FFTIFIGVNITFFPQHFLG 261
+ G F+ H G
Sbjct: 170 VVLLVWGTTCIFWGMHLSG 188
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 97.9 bits (233), Expect = 2e-19
Identities = 51/140 (36%), Positives = 78/140 (55%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
T G+ +FT++ ++A+P+G++IF +AT+ + L + F + IGGL
Sbjct: 315 TAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFIIGGL 374
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
+GV++A+ D+ HDTY+VVAHFHYVL YP TG ++ + K+
Sbjct: 375 SGVMVASVPFDMQAHDTYFVVAHFHYVLIGGAVFPLLGGLYYWYPKFTGRMMSERLGKVA 434
Query: 317 FFTIFIGVNITFFPQHFLGL 258
F+ F G N+TFFP H LGL
Sbjct: 435 FWVTFAGFNLTFFPMHKLGL 454
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 97.9 bits (233), Expect = 2e-19
Identities = 57/141 (40%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFM-KIRFGIFIHIGG 501
T G+ A F A + +A+PTGIKIF L TI W N Y + + F +GG
Sbjct: 302 TTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTI-WGGNVKYTTAMLYAVSFIPSFVLGG 360
Query: 500 LTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKI 321
+TGV+LA ++ D HDTY+VVAHFHYV+ +P G L+ + KI
Sbjct: 361 VTGVMLAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKMFGKILHETMGKI 420
Query: 320 QFFTIFIGVNITFFPQHFLGL 258
F FIG ++TFF QHF+GL
Sbjct: 421 SFVLFFIGFHLTFFIQHFVGL 441
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 97.5 bits (232), Expect = 3e-19
Identities = 54/134 (40%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Frame = -2
Query: 653 RAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIF--IHIGGLTGVILA 480
R +F + +++AVPTGIKIF T+ W + M FG IGGLTGV++A
Sbjct: 312 RMFFMATTMLIAVPTGIKIFSWCGTL-WGGK-IQLNSAMLFAFGFLSSFMIGGLTGVMVA 369
Query: 479 NSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFI 300
+ DI +HDTY+VV HFHYVL + +P TG +N + ++ F FI
Sbjct: 370 SVPFDIHVHDTYFVVGHFHYVLFGGSAFALFSGVYHWFPKMTGRMVNEPLGRLHFILTFI 429
Query: 299 GVNITFFPQHFLGL 258
G+N+TF P H LGL
Sbjct: 430 GMNLTFMPMHELGL 443
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 93.9 bits (223), Expect = 3e-18
Identities = 53/141 (37%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Frame = -2
Query: 674 VGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLT 495
VG+D+D RAYF I++ +PT +K+F + + + + + I F IG +T
Sbjct: 297 VGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVT 356
Query: 494 GVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQF 315
G+ L+N +DI LHDTY+VV HFHYVLS I + L L + Y+ + +
Sbjct: 357 GLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFI--HFLAKWLPIELYLFWMFY 414
Query: 314 F--TIFIGVNITFFPQHFLGL 258
F T+FIG N+ FFP H LG+
Sbjct: 415 FISTLFIGSNMLFFPMHSLGM 435
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 93.5 bits (222), Expect = 4e-18
Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Frame = -2
Query: 644 FTSAPIIMAVPTGIKIFR*LATIPWNSN*LY-P*YFMKIRFGIFIHIGGLTGVILANSSM 468
F +I+AVP+ +K F + T+ W N ++ P I GG+TG+IL N++M
Sbjct: 366 FMFLTLIIAVPSAVKSFNYITTL-WRGNIIFTPAMMFSIGLVSMFISGGVTGIILGNNAM 424
Query: 467 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGVNI 288
DI LHDTYYVVAHFH V+ + +P G ++ + I F+ F+G +
Sbjct: 425 DIQLHDTYYVVAHFHLVMGSASFFGMMAGVYHWFPKMFGRMMDEKLGYIHFWFTFVGAYL 484
Query: 287 TFFPQHFLGLAEY 249
FFP H++G+A +
Sbjct: 485 VFFPMHYIGIAGF 497
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 93.1 bits (221), Expect = 6e-18
Identities = 54/140 (38%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Frame = -2
Query: 674 VGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LY-P*YFMKIRFGIFIHIGGL 498
VG+ M +F +++A+PTGIK+F AT+ W + + F + IGGL
Sbjct: 313 VGLGMYADIFFAVGSLLIAIPTGIKVFNWTATL-WGGEIQFNTSLHFAVAFLLQFVIGGL 371
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TG++ A +D L DTY+VVAHFHYVL +P TG LN I +Q
Sbjct: 372 TGIMFAAVPIDWQLTDTYFVVAHFHYVLIGGLVFALFSAAYYWFPKMTGRMLNERIGILQ 431
Query: 317 FFTIFIGVNITFFPQHFLGL 258
F+ +G N+TF QHFLGL
Sbjct: 432 FWLWVLGFNMTFMVQHFLGL 451
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 93.1 bits (221), Expect = 6e-18
Identities = 56/141 (39%), Positives = 84/141 (59%), Gaps = 2/141 (1%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATI-PWNSN*LYP*YFMKIRFGIFIHIGG 501
T G+D+D R+YFT+A +I+AVPTGIKIF L+++ L F+++ F + IGG
Sbjct: 277 TAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSFAIGG 336
Query: 500 LTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKI 321
+G+IL+N+S+D LHDTYYVVAHFH V++ Y L + LSL +
Sbjct: 337 TSGIILSNASVDHYLHDTYYVVAHFHIVVALSLVYGILVGL---YYLSSYLSLPFSLPLS 393
Query: 320 QFFTIFIGVNITFFP-QHFLG 261
+ ++F+ + + F QHF G
Sbjct: 394 GYASLFVFSSFSVFALQHFQG 414
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 91.5 bits (217), Expect = 2e-17
Identities = 54/140 (38%), Positives = 74/140 (52%)
Frame = -2
Query: 674 VGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLT 495
VG+ A+F +A ++AVPTG+KIF LAT+ S L I F IGG++
Sbjct: 312 VGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFIIGGIS 371
Query: 494 GVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQF 315
GV LA+ +++ D+YYVVAH HYVL +P TG L+ + K QF
Sbjct: 372 GVTLASPPINVQQTDSYYVVAHMHYVLFGGAIQGIFAGIFYWFPKMTGRMLDERLGKWQF 431
Query: 314 FTIFIGVNITFFPQHFLGLA 255
+ + I N+TFFP H G A
Sbjct: 432 WLMLISFNLTFFPMHLSGNA 451
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 89.0 bits (211), Expect = 1e-16
Identities = 55/148 (37%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*-YFMKIRFGIFIHIGG 501
TVG++ D RAYF++ I++A+PTG KIF L T + N + + F + +GG
Sbjct: 7 TVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILLFTLGG 66
Query: 500 LTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLN------ 339
TGV++ N+ MDI LHDTYY+VAHFH+VLS + G +LN
Sbjct: 67 TTGVVMGNAGMDIALHDTYYIVAHFHFVLSLGAILATICGFVFYSKDMFGDTLNLFHVNT 126
Query: 338 --SYILKIQFFTIFIGVNITFFPQHFLG 261
S L I F + + F P H LG
Sbjct: 127 GSSPYLNIWFVVFLASIMLIFLPMHILG 154
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 88.6 bits (210), Expect = 1e-16
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Frame = -2
Query: 647 YFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHI--GGLTGVILANS 474
+F + +I+A+PT IK++ + T+ W+ + ++ M G I GGLTG+ L N
Sbjct: 343 FFATTTLIIAIPTAIKVYNWVLTL-WHGD-IHLTVPMLFALGFIITFVNGGLTGLFLGNV 400
Query: 473 SMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGV 294
+D+ L DT +VVAHFH V+ + YP TG LN + K F+ F+G
Sbjct: 401 VVDVPLSDTMFVVAHFHMVMGVAPIMVVLGAIYHWYPKVTGRMLNDVLGKFHFWVTFLGA 460
Query: 293 NITFFPQHFLGL 258
+ FFP H+LGL
Sbjct: 461 YLIFFPMHYLGL 472
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 87.8 bits (208), Expect = 2e-16
Identities = 50/138 (36%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = -2
Query: 671 GIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*-LYP*YFMKIRFGIFIHIGGLT 495
G+D RA F + + +AVP+ +K F + T+ WN N L + F +GG+T
Sbjct: 380 GLDPRLRASFMAVSLAIAVPSAVKTFNWITTM-WNGNIRLTTPMLFSVGFVANFILGGVT 438
Query: 494 GVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQF 315
GV LA+ +D+ LH TYYVV HFHY++ +PL TG + K+ F
Sbjct: 439 GVFLASIPVDLVLHATYYVVGHFHYIVMGAIAFAGFAGIYYWFPLYTGRMYQRTLGKMHF 498
Query: 314 FTIFIGVNITFFPQHFLG 261
+ IG NITFF LG
Sbjct: 499 WLSMIGTNITFFAMILLG 516
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 87.4 bits (207), Expect = 3e-16
Identities = 52/140 (37%), Positives = 73/140 (52%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
T+G ++F+ + +++PTG+KIF L T+ + F IGG+
Sbjct: 333 TMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFVIGGV 392
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TGV+LA ++ D H+TY++V+HFHYVL I YP G LN I K
Sbjct: 393 TGVMLAMAAADYQYHNTYFLVSHFHYVLIAGTVFACFAGFIFWYPKMFGHKLNERIGKWF 452
Query: 317 FFTIFIGVNITFFPQHFLGL 258
F+ IG NI FFPQ+FLGL
Sbjct: 453 FWIFMIGFNICFFPQYFLGL 472
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 86.6 bits (205), Expect = 5e-16
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LY---P*YFMKIRFGIFIHI 507
T GI +F++A + +A+P+GI++F +ATI + P F+ + F +
Sbjct: 319 TTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLFV-LGFLFIFTV 377
Query: 506 GGLTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYIL 327
GG+TGV++A +D +HDTY+VVAHFHYVL P + L+ +
Sbjct: 378 GGVTGVMVALVPIDFQVHDTYFVVAHFHYVLIGGMVFPLFATFYYWIPAFSRNMLSERLG 437
Query: 326 KIQFFTIFIGVNITFFPQHFLGL 258
+ F+ +FIG N+TFFP H GL
Sbjct: 438 RWVFWLMFIGFNVTFFPMHMAGL 460
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
TVG+D D RAYF+ A +I+A+PTG KIF LATI + + F + IGG+
Sbjct: 311 TVGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTIGGV 370
Query: 497 TGVILANSSMDITLHDTYYVVA 432
TGV++ANSS+DI HDTYYVVA
Sbjct: 371 TGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 85.0 bits (201), Expect = 2e-15
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIH---I 507
TVG+D+D R+YF+ A I+++PT +K+F + T W S + F F+
Sbjct: 303 TVGLDIDSRSYFSIATSIISIPTSVKMFSYINT--WASGRGFRGNNSSWSFFSFLICFCF 360
Query: 506 GGLTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYIL 327
GG TG++L++ S+DI LHDTY+VV HFH VLS P+ S+
Sbjct: 361 GGFTGLLLSSGSLDIMLHDTYFVVGHFHTVLSLAATFGLLIAHYFFLPIIFSYSIFESFS 420
Query: 326 KIQFFTIFIGVNITFFPQHFLGLA 255
F + +G + F+P H GL+
Sbjct: 421 FYHTFLLLVGALLVFYPMHLAGLS 444
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 84.2 bits (199), Expect = 3e-15
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Frame = -2
Query: 644 FTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMK-IRFGIFIHIGGLTGVILANSSM 468
F + +++A+P+ IK F ATI W + + I F +GGL+G+ +A +
Sbjct: 356 FMVSTMMIALPSAIKTFNWTATI-WGGKLEFNTVTLNCIAFLSMFIVGGLSGIFMAAVPV 414
Query: 467 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGVNI 288
D+ HDTY++VAHFHY+L +P G +N + K F FIG N
Sbjct: 415 DVYFHDTYFIVAHFHYILFGATLFGVFAGIQFWFPKMFGRMMNEKLGKTHFVLTFIGANG 474
Query: 287 TFFPQHFLGL 258
TFFP HFLG+
Sbjct: 475 TFFPMHFLGM 484
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 83.4 bits (197), Expect = 5e-15
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
Frame = -2
Query: 650 AYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIR-FGIFIHIGGLTGVILANS 474
A+F +A +++++P+ + +F +ATI W ++ F+ F + +GG++GV+ A
Sbjct: 338 AFFGAASMLISIPSAVAVFAWIATI-WTGRPVFRTPFLYFAGFVLMFVVGGVSGVMTAAV 396
Query: 473 SMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGV 294
+D L DTY+VVAH HYVL +P TG +N K+ F+ + +G
Sbjct: 397 PLDWQLTDTYFVVAHLHYVLLGINVFPVLGGVAYWFPKFTGRMMNERFGKLTFWVVLVGF 456
Query: 293 NITFFPQHFLGL 258
N+ FFP H GL
Sbjct: 457 NLGFFPMHISGL 468
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 82.2 bits (194), Expect = 1e-14
Identities = 52/115 (45%), Positives = 59/115 (51%)
Frame = -2
Query: 647 YFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSM 468
Y SA P G+K F + + N N P FM IH GGLTGVILANSS
Sbjct: 223 YLXSAXXFXXGPPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSX 281
Query: 467 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIF 303
DI LHDTYYVVAH HYVLS + +PL TGL+L I F I+
Sbjct: 282 DIILHDTYYVVAHXHYVLSMGAVFAILAGIVQWFPLFTGLTLTMNIKNTIFSYIY 336
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 81.0 bits (191), Expect = 3e-14
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNS-N*LYP*YFMKIRFGIFIHIGG 501
T G+ +F++A + +PTGI++F +AT+ + P ++ +F GG
Sbjct: 335 TTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFT-AGG 393
Query: 500 LTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKI 321
LTGV++A + D +HDTY++VAH HY L YP+ T +L+ + +
Sbjct: 394 LTGVMVAIAPFDWQVHDTYFIVAHLHYTLFGGMVFPIIAGVYYFYPVITKKALSERLGRW 453
Query: 320 QFFTIFIGVNITFFPQHFLGL 258
F+ +F G N+TF P H GL
Sbjct: 454 SFWLLFTGFNVTFLPMHLTGL 474
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 81.0 bits (191), Expect = 3e-14
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = -2
Query: 674 VGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLT 495
VG+D+D RAYFT+A +I+AVPTGIKIF LAT+ S + + F IGGLT
Sbjct: 294 VGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLT 353
Query: 494 GVILANSSMDITLHDTYY 441
GVILAN+S+D+ LHD Y
Sbjct: 354 GVILANASLDVALHDLKY 371
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 80.6 bits (190), Expect = 3e-14
Identities = 44/132 (33%), Positives = 65/132 (49%)
Frame = -2
Query: 644 FTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSMD 465
F A +++A+P+ +K F L T+ + F IGGL+G+ +A + +D
Sbjct: 353 FMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVIGGLSGIFMAATPVD 412
Query: 464 ITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGVNIT 285
I +HDTY++VAHFHYVL +P G +N KI F FI +N T
Sbjct: 413 IVIHDTYFIVAHFHYVLFAGTAMAVFGSIYFWFPKMFGRMMNETAGKIHFALTFIFLNGT 472
Query: 284 FFPQHFLGLAEY 249
FF H LG+ +
Sbjct: 473 FFTMHILGVGGF 484
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 80.6 bits (190), Expect = 3e-14
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*-LYP*YFMKIRFGIFIHIGG 501
T GID R+ F + + +++P+ +K+F + T+ WN L I F IGG
Sbjct: 347 TTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTM-WNGKLRLTAPMLFCIGFVQNFIIGG 405
Query: 500 LTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKI 321
+TGV LA +D+ LHDTYYVV HFH+++ +P+ TG +
Sbjct: 406 VTGVFLAVIPIDLILHDTYYVVGHFHFIVYGAIGFALFAASYYWFPMVTGRMYQKRLAHA 465
Query: 320 QFFTIFIGVNITFFPQHFLG 261
F+T +G N TF +LG
Sbjct: 466 HFWTALVGSNATFLAMLWLG 485
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 79.8 bits (188), Expect = 6e-14
Identities = 41/75 (54%), Positives = 50/75 (66%)
Frame = -2
Query: 674 VGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLT 495
VG+D D RAYFTSA +I+A+PTGIKIF LATI S L I F +GGLT
Sbjct: 295 VGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTVGGLT 354
Query: 494 GVILANSSMDITLHD 450
GV+LAN+S+D+ HD
Sbjct: 355 GVVLANASLDVAFHD 369
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 78.2 bits (184), Expect = 2e-13
Identities = 50/141 (35%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFM-KIRFGIFIHIGG 501
TVG+ + F+ + +AVPTG+KIF L+T+ W + + I F IGG
Sbjct: 313 TVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTM-WGGQIRFTAAMLFAIGFIASFTIGG 371
Query: 500 LTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKI 321
L+G + A + D HDTY+VVAHFHYVL + +P G L+ + +
Sbjct: 372 LSGFMHAAAPSDAQQHDTYFVVAHFHYVLIGGSIFAILSGIHHWFPKVFGRMLDERLGRW 431
Query: 320 QFFTIFIGVNITFFPQHFLGL 258
F IF G + FP H LGL
Sbjct: 432 SFALIFTGFHTFAFPFHILGL 452
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 78.2 bits (184), Expect = 2e-13
Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNS-----N*LYP*YFMKIRFGIFI 513
T GI ++F +A +A+P+G+++F +AT P F+ IF+
Sbjct: 378 TTGIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFLFIFV 437
Query: 512 HIGGLTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSY 333
+GGLTGV++A D HD+Y++VAH HYVL P + +L+
Sbjct: 438 -LGGLTGVMVAVIPFDWQAHDSYFIVAHLHYVLVGGMVFPLFAAFYYWMPYTSRQALSER 496
Query: 332 ILKIQFFTIFIGVNITFFPQHFLGLA 255
+ + F +F+G NITFFP HF GLA
Sbjct: 497 LGRWVFGLMFVGFNITFFPMHFTGLA 522
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 77.8 bits (183), Expect = 2e-13
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Frame = -2
Query: 671 GIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*L-YP*YFMKIRFGIFIHIGGLT 495
G+ + + F++A ++AVPTG++IF +AT+ L P +F+ IF+ +GG+T
Sbjct: 337 GLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFV-LGGMT 395
Query: 494 GVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQF 315
GV++A ++ HD+Y+VVAH HYVL P TG ++ + K F
Sbjct: 396 GVMVAAVPFNLQAHDSYFVVAHLHYVLIGGMVFPMFGALYYWVPHFTGRMMSERLGKWVF 455
Query: 314 FTIFIGVNITFFPQHFLGL 258
+ +F G N+ FF H G+
Sbjct: 456 WLMFSGFNLAFFMMHLTGM 474
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 76.2 bits (179), Expect = 7e-13
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Frame = -2
Query: 671 GIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIH-IGGLT 495
G+ R F+ +++AVPTGIKIF + T+ + + + G+F+ IGGLT
Sbjct: 251 GVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTL-YRGAIHFRSQMLYALGGVFMFLIGGLT 309
Query: 494 GVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQF 315
G+ L ++D+ + D+ +VV HFHYVL I+ +PL TG + K+ F
Sbjct: 310 GLPLGMVAIDLGVSDSLFVVGHFHYVLGMAITLGILGAVIHWFPLATGKYYPENLGKLSF 369
Query: 314 FTIFIGVNITFFPQHFLGL 258
+ IF G NI +F Q G+
Sbjct: 370 WLIFAGANIFYFLQMVAGM 388
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 76.2 bits (179), Expect = 7e-13
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Frame = -2
Query: 647 YFTSAPIIMAVPTGIKIFR*LATIPW-NSN*LYP*YFMKIRFGIFIHIGGLTGVILANSS 471
YFT+ I++A+PTG KIF + T+ S + F + IGG TGV+L N+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAG 368
Query: 470 MDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*Y-PLXTGLSLNSYILKIQFFTIFIGV 294
+D+ LHDT YVV HFH+VLS I L G+ L++ + + I V
Sbjct: 369 IDLALHDTVYVVGHFHFVLSIGAIISMICFIIYIQRMLLFGIILSNRLSSLIAPIFMISV 428
Query: 293 NITFFPQHFLGLA 255
+TF P HF G +
Sbjct: 429 LLTFLPMHFTGFS 441
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 75.8 bits (178), Expect = 1e-12
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Frame = -2
Query: 647 YFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFM-KIRFGIFIHIGGLTGVILANSS 471
+F+ +++VPTG+K F + T+ W + + + + F GGLTG++LA+
Sbjct: 326 FFSFMTFLISVPTGVKFFNWVGTM-WKGHITWETPMIWSVGFMATFLFGGLTGIMLASPP 384
Query: 470 MDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGVN 291
+D L D+Y+++AHFHY L +P TG ++ + KI F+ F+G +
Sbjct: 385 LDFHLADSYFLIAHFHYTLFGTVVFASCAGVYFWFPKMTGRMMDERLGKIHFWLTFVGFH 444
Query: 290 ITFFPQHFLG 261
TF QH++G
Sbjct: 445 GTFLIQHWVG 454
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 75.8 bits (178), Expect = 1e-12
Identities = 41/130 (31%), Positives = 69/130 (53%)
Frame = -2
Query: 650 AYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSS 471
A+FT+ ++AVPTG+K+F + T+ + + + F +GG+TGV+L+ +
Sbjct: 315 AFFTA---LIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGGITGVMLSMTP 371
Query: 470 MDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGVN 291
+D HD+Y+VVAHFH VL +P TG + + ++ F+ +G
Sbjct: 372 LDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMTGRMYDERLGRLHFWLFLVGYL 431
Query: 290 ITFFPQHFLG 261
+TF PQ+ LG
Sbjct: 432 LTFLPQYALG 441
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 74.9 bits (176), Expect = 2e-12
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Frame = -2
Query: 653 RAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHI-GGLTGVILAN 477
R F +++A+PTG+K+F L T+ W N + G+ I G+TGV+LA
Sbjct: 327 RHIFMFTTMLIAIPTGVKVFAWLGTL-WAGNLRLNTPMLFCIGGLINFIFAGITGVMLAT 385
Query: 476 SSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIG 297
+DI + +TY+VVAHFHYV+ + +P TG + K+ F FIG
Sbjct: 386 VPIDIHVGNTYFVVAHFHYVIFNTIVFGVFAGIYHWFPKFTGKMYYEGLGKVHFVLTFIG 445
Query: 296 VNITFFPQHFLGL 258
+ + P H+ GL
Sbjct: 446 ATLNWLPLHWAGL 458
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 74.5 bits (175), Expect = 2e-12
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
Frame = -2
Query: 674 VGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LY--P*YFMKIRFGIFIHIGG 501
VGI + F + +I+AVPTG+KIF + T+ W L P Y++ I F IGG
Sbjct: 312 VGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTL-WGGRILMRMPTYWL-IGFIFNFLIGG 369
Query: 500 LTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKI 321
+TGV L D + +YYVVAHFH V+ +P TG L+ +
Sbjct: 370 ITGVSLGMIPFDYQVTMSYYVVAHFHNVMMFGTAFLAMAGLYYWWPKMTGRFLDEKVGLA 429
Query: 320 QFFTIFIGVNITFFPQHFLGL 258
F+ IG +TF PQ+ LGL
Sbjct: 430 HFWLFMIGSWLTFLPQYILGL 450
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 73.3 bits (172), Expect = 5e-12
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LY-P*YFMKIRFGIFIHIGG 501
T GI A+F++A ++AVPT +++F + T+ + L+ P ++ F F+ IGG
Sbjct: 309 TTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFV-IGG 367
Query: 500 LTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKI 321
LTGV++A D +HDTY++VAH HYVL P TG +
Sbjct: 368 LTGVMVAIVPFDWQVHDTYFIVAHLHYVLIGGFVFPMLAALYYWLPHFTGRKTYFNLGPT 427
Query: 320 QFFTIFIGVNITFFPQHFLGL 258
F+ + IG + TF H+ GL
Sbjct: 428 AFWLVVIGFHGTFLLLHWAGL 448
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 72.9 bits (171), Expect = 7e-12
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
T+G +F+ + +I+A+PTG+KIF + TI +++ +F I F I IGG
Sbjct: 332 TMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFSIGGF 391
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPL-XTGLSLNSYILKI 321
+GVIL+ ++D H++ +++AHFH V+ Y L LN+ K
Sbjct: 392 SGVILSIPNLDFIFHNSMFLIAHFHSVIIGGVLFGYLSGISLWYNLIYNNCELNN---KF 448
Query: 320 QFFTIF--IGVNITFFPQHFLGLAEYLDDIQI 231
F +F IGV +TFFP +FLG + I I
Sbjct: 449 NFNILFWLIGVILTFFPFYFLGYCGMIRRINI 480
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 71.3 bits (167), Expect = 2e-11
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*--LYP*YFMKIRFGIFIHIG 504
T GI A F++A ++AVPT +++F + T+ W P ++ F F+ IG
Sbjct: 309 TTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTL-WRGTPEMRLPMMWILAFFATFV-IG 366
Query: 503 GLTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILK 324
GLTGV++A D +HDT+++VAH HYVL P TG +
Sbjct: 367 GLTGVMVAVVPFDWQVHDTHFIVAHLHYVLVGGFVFPMLAALYYWMPHVTGRKRFFRVGD 426
Query: 323 IQFFTIFIGVNITFFPQHFLGL 258
+ F+ + +G + TF H++GL
Sbjct: 427 VAFWLVTVGFHATFLAVHWVGL 448
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 70.9 bits (166), Expect = 3e-11
Identities = 42/139 (30%), Positives = 65/139 (46%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
T+G + A+F A +I+++PTG+K+F L TI + F + IGG+
Sbjct: 338 TMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFSIGGM 397
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TGV+LA D LH++ +++AHFH + +P G LN + K
Sbjct: 398 TGVLLAVPGADYVLHNSLFLIAHFHNTIIGGAVFGYLAGVSFWFPKVFGFKLNDKLGKAS 457
Query: 317 FFTIFIGVNITFFPQHFLG 261
F+ IG F P + LG
Sbjct: 458 FWFWQIGFMFAFMPLYVLG 476
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 70.5 bits (165), Expect = 4e-11
Identities = 42/139 (30%), Positives = 64/139 (46%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
T+G +F A +++++PTG+K+F L TI + F I IGG+
Sbjct: 337 TMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSIGGM 396
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TGV+LA D LH++ +V+AHFH V+ +P G +LN K
Sbjct: 397 TGVLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAYWFPKAFGFTLNEKWGKAA 456
Query: 317 FFTIFIGVNITFFPQHFLG 261
F+ G + F P + LG
Sbjct: 457 FWFWISGFYVAFMPLYALG 475
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 69.3 bits (162), Expect = 8e-11
Identities = 40/124 (32%), Positives = 61/124 (49%)
Frame = -2
Query: 629 IIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSMDITLHD 450
+++++P G+ + + T+ S + F IGGLTGV LA S+ + L +
Sbjct: 310 VLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFLIGGLTGVPLALVSLTVHLSE 369
Query: 449 TYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGVNITFFPQH 270
TYYVV HFHYV++ +P TG N I K F+ F+GVNI F+
Sbjct: 370 TYYVVGHFHYVMAVAGTFAIFGGVYYIFPKMTGKMYNETIGKWAFWITFVGVNIVFWIMM 429
Query: 269 FLGL 258
+G+
Sbjct: 430 DIGV 433
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 69.3 bits (162), Expect = 8e-11
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = -1
Query: 126 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 19
NQRI LFSLN+PSSIE YQNLPPAEHSYNELPIL N
Sbjct: 451 NQRIILFSLNMPSSIEWYQNLPPAEHSYNELPILSN 486
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/128 (28%), Positives = 64/128 (50%)
Frame = -2
Query: 665 DMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVI 486
D PR A + +A+P+G+K+F +AT+ L + F +F +GG+TGV
Sbjct: 307 DFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVTGVF 366
Query: 485 LANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTI 306
++D+ LHDTY+V+ HFHY+++ +P TG + + +I + I
Sbjct: 367 FPVITLDLHLHDTYFVLGHFHYIVNAIAFGVFGALLYY-FPHLTGRWYDERLARISWALI 425
Query: 305 FIGVNITF 282
+G T+
Sbjct: 426 TVGGFATY 433
>UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46;
Neoptera|Rep: Cytochrome c oxidase subunit I - Eueides
tales
Length = 95
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/74 (48%), Positives = 39/74 (52%)
Frame = -1
Query: 240 YSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINQRINLFSLNLPSSIE*YQNLP 61
YSDYPD INQR+ LFSLN+PSSIE YQN P
Sbjct: 1 YSDYPDNYMSWNIISSFGSYISLFSMILIIIIIWESMINQRMILFSLNMPSSIEWYQNFP 60
Query: 60 PAEHSYNELPILRN 19
P+EHSYNELPIL N
Sbjct: 61 PSEHSYNELPILSN 74
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/83 (39%), Positives = 44/83 (53%)
Frame = -2
Query: 506 GGLTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYIL 327
GG++G LA S+DI LH TY+VV HFH V+ +P TG +N +
Sbjct: 398 GGVSGFFLAQPSIDIYLHATYFVVGHFHLVMGVAAIFGVFAGTYFWFPKMTGHMMNETLG 457
Query: 326 KIQFFTIFIGVNITFFPQHFLGL 258
KI F+ FIG F P H+LG+
Sbjct: 458 KIHFWGTFIGAYCIFMPFHYLGM 480
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 66.9 bits (156), Expect = 4e-10
Identities = 38/123 (30%), Positives = 57/123 (46%)
Frame = -2
Query: 629 IIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSMDITLHD 450
+ + + T IK+F AT+ S + F F+ GG+TG+ LA S+D+ HD
Sbjct: 328 MFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVFGGMTGIALATVSLDVHWHD 387
Query: 449 TYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGVNITFFPQH 270
TY++VAHFH+++ +P G L + I +G N TF PQ
Sbjct: 388 TYFIVAHFHFIMVGATVMAFLAALHYWFPKIAGKRLPEGWGLVAAVMIILGFNFTFIPQF 447
Query: 269 FLG 261
LG
Sbjct: 448 LLG 450
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 65.3 bits (152), Expect = 1e-09
Identities = 40/132 (30%), Positives = 61/132 (46%)
Frame = -2
Query: 671 GIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTG 492
GI++ + F + I +++P + +F + T+ + + I IGG+TG
Sbjct: 317 GINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFIIGGITG 376
Query: 491 VILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFF 312
V L +D TY+VVAHFHYV+ YP TG N + KIQF
Sbjct: 377 VFLGAIVLDYQFRGTYWVVAHFHYVM-VAGATALFGGLYYWYPKITGKMYNETLGKIQFG 435
Query: 311 TIFIGVNITFFP 276
F+G N+ +FP
Sbjct: 436 VYFLGFNLLYFP 447
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 64.1 bits (149), Expect = 3e-09
Identities = 37/123 (30%), Positives = 57/123 (46%)
Frame = -2
Query: 629 IIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSMDITLHD 450
+I+ V T IK+F + T+ + + F F GG+TG+ L S+D+ HD
Sbjct: 335 MIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGIALGTVSLDVAWHD 394
Query: 449 TYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGVNITFFPQH 270
TY+VVAHFH+++ +P G + + + I +G N TF PQ
Sbjct: 395 TYFVVAHFHFIMVGATIMAFLAALHYWFPKMFGRTYHEGWGLVAAALIILGFNATFIPQF 454
Query: 269 FLG 261
LG
Sbjct: 455 LLG 457
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 64.1 bits (149), Expect = 3e-09
Identities = 61/204 (29%), Positives = 84/204 (41%), Gaps = 3/204 (1%)
Frame = -2
Query: 665 DMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGG---LT 495
D+D RAYFTSA +I+AVPTGIKIF LAT+ P + F +GG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGGPNWSN 60
Query: 494 GVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQF 315
+ N H ++ + L Y L N +Q
Sbjct: 61 FSLFINWYCSSRYHIMLLLIFIMFFQLGLYLLLYQDSFIDTHYLQDFLLMQNDLKFNLQL 120
Query: 314 FTIFIGVNITFFPQHFLGLAEYLDDIQIIQTHIFHEI*FLH*VHIFLYYQ***Y*LLFEN 135
+ F+ + + F FL L EYLDDIQI + E+ + +L + LLFE
Sbjct: 121 Y--FLELILHFSHNIFLDLPEYLDDIQIFLMDLIVEMLYQDLDLYYLLLELSISYLLFEK 178
Query: 134 Q*LTNELTYFL*ISHHQLNDIKIY 63
+ + YFL H LND KI+
Sbjct: 179 ELSQIDQFYFLLNYRHLLNDTKIF 202
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 63.7 bits (148), Expect = 4e-09
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Frame = -2
Query: 626 IMAVP-TGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIG-GLTGVILANSSMDITLH 453
+ AVP + + +F +AT+ WN + M GI + G GV+ A +D T H
Sbjct: 311 LAAVPASAMHVFNFVATM-WNGRIRFDSPMMWSIGGIALFFSAGAGGVLNAAMPLDFTTH 369
Query: 452 DTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGVNITFFPQ 273
DTY+VV HFH + +P TG N + KI F F+G + FF Q
Sbjct: 370 DTYWVVGHFHLFVMGTIAFGSIGFFYYMFPFVTGRMYNEKLGKIHFVFSFVGAVLLFFTQ 429
Query: 272 HFLGL 258
H LG+
Sbjct: 430 HILGI 434
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = -2
Query: 662 MDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHI 507
+D RAYFTSA +I+AVPTGIKIF LAT WNSN + +M I IFIH+
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLATFTWNSNLFFSITYMGISICIFIHL 53
Score = 35.9 bits (79), Expect = 0.95
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = -1
Query: 396 CNYXGIY*LISFXYRPFIKFLYTKNSIFYNIYWSK 292
CNY GIY L+ K L KNSIFYNI+ K
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGK 125
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -2
Query: 629 IIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIH-IGGLTGVILANSSMDITLH 453
+++++P+ + + + T+ W + Y + +F+ +GGLTG+ L + SMD+ LH
Sbjct: 347 LLISIPSMVVVVNWVLTL-WQGSLRYDTPMLFALGTVFVFGVGGLTGLFLGDISMDLYLH 405
Query: 452 DTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGVNITFFPQ 273
DT +VV HFH+ ++ +P G L + KI F+ F+G+ + F Q
Sbjct: 406 DTMFVVGHFHFTMAAASVMGAFTGIYFWFPKMFGRRLGERLGKIHFWFTFLGLTLVFGGQ 465
Query: 272 HFLGLA 255
G A
Sbjct: 466 LLAGYA 471
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 62.5 bits (145), Expect = 1e-08
Identities = 48/108 (44%), Positives = 54/108 (50%)
Frame = -2
Query: 350 LSLNSYILKIQFFTIFIGVNITFFPQHFLGLAEYLDDIQIIQTHIFHEI*FLH*VHIFLY 171
LS++SY K F + F F G EYLDDI IIQ EI F H F
Sbjct: 401 LSIHSYS-KFNFLLYSSELISLFSLNIFSGSLEYLDDILIIQILTSLEISFHHSDLTFHC 459
Query: 170 YQ***Y*LLFENQ*LTNELTYFL*ISHHQLNDIKIYHQQNIHIMNYQF 27
Y LLFENQ EL Y + LND KIY QQ+IH+MNYQF
Sbjct: 460 LPSYSYSLLFENQSFITELLYLPSMYLLLLNDTKIYLQQSIHMMNYQF 507
Score = 36.3 bits (80), Expect = 0.72
Identities = 24/51 (47%), Positives = 26/51 (50%)
Frame = -3
Query: 418 FYQ*EQYLQLXGDLLTDILYXQAFH*ILIY*KFNFLQYLLE*I*HFFHNIF 266
F+ QYL L DL D LY + I Y KFNFL Y E I F NIF
Sbjct: 377 FFPSGQYLLLSADLFIDTLYLLDYLSIHSYSKFNFLLYSSELISLFSLNIF 427
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 61.3 bits (142), Expect = 2e-08
Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LY-P*YFMKIRFGIFIHIGG 501
T+G +F++A +++ +PTG+K+F T+ W + P + + +GG
Sbjct: 356 TMGAGPGINIFFSTATMLVGIPTGVKVFNWALTL-WRGRLRFEPPMLWALGALFLLLVGG 414
Query: 500 LTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKI 321
LTG++LA +++ T+H++ +VVAHFH ++ +P G L++ +
Sbjct: 415 LTGMMLAIPAINYTVHNSVFVVAHFHCMMLLIAYAIFGAIIF-WFPKLFGFHLDAPSARA 473
Query: 320 QFFTIFIGVNITFFPQHFLGLAEYLDDIQIIQTHIFHEI*FLH*VHIFLY 171
F++ +G + F LGL + + + + + + IF Y
Sbjct: 474 NFWSFSVGTVLVFGAMFALGLMGMTRRLDYLSNPGYEPLLIVEEIGIFFY 523
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/140 (27%), Positives = 64/140 (45%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGL 498
T+G A F A +++ +PTG+KI+ + T+ + F IGG+
Sbjct: 357 TMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVIGGI 416
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TG++LAN +D +H+T ++VAHFH ++ +P G L+ +I
Sbjct: 417 TGIMLANPILDYQVHNTVFLVAHFHNMVVPGVLFGMLAGYTFWFPKAFGFRLDERWGRIS 476
Query: 317 FFTIFIGVNITFFPQHFLGL 258
+ G FFP + LGL
Sbjct: 477 AYCWIFGWMGAFFPLYILGL 496
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 59.7 bits (138), Expect = 7e-08
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Frame = -2
Query: 671 GIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIH--IGGL 498
G ++ R +++ I++++P + + + T+ + +Y M G ++ IGG
Sbjct: 303 GTNIYTRLFYSITTILISIPFEMAVMSFIFTL-YKGRLVYT-VPMLFAVGALLNFIIGGS 360
Query: 497 TGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQ 318
TGV L + ++D TY+VVAHFHY+L +P TG + + + KI
Sbjct: 361 TGVYLGSIAIDRGFRGTYWVVAHFHYILVGTVTLGLIAGLYYWWPKITGRTYSERLGKIH 420
Query: 317 FFTIFIGVNITFFPQHFL 264
F +GV +TF PQ L
Sbjct: 421 FALAMLGVALTFLPQFAL 438
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 58.4 bits (135), Expect = 2e-07
Identities = 42/120 (35%), Positives = 51/120 (42%)
Frame = -1
Query: 645 FYFSSYNYGCTNGN*NF*MTSYNTMELKLIIPLIFYED*VWYFYSHRRINRCNFSQFFYG 466
F F++YNY N NF MT Y + + L+ P +F N +FSQF
Sbjct: 8 FTFNNYNYCHPYSNLNFLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNW 67
Query: 465 YYIT*YXXXXXXXXXXXXXXXXICNYXGIY*LISFXYRPFIKFLYTKNSIFYNIYWSKYN 286
YY T Y ICNY IY L+ F K KNSI+ NIY SK N
Sbjct: 68 YYSTWYLLCCSSFPLRSFNSSSICNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSN 127
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/140 (23%), Positives = 67/140 (47%)
Frame = -2
Query: 674 VGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLT 495
VG+D R +++ I++++P IK+ ++ + + + + F + + G T
Sbjct: 455 VGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFLVAGFT 514
Query: 494 GVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQF 315
G+ L++ S+++++HDT+YVVAHFH +LS + G+ + +
Sbjct: 515 GMWLSHVSLNVSMHDTFYVVAHFHIMLSGAAITGIFSGFYYYFNALFGIKFSRMFGYMHL 574
Query: 314 FTIFIGVNITFFPQHFLGLA 255
G + F PQ +LG +
Sbjct: 575 IYYSGGQWVAFVPQFYLGFS 594
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/84 (35%), Positives = 41/84 (48%)
Frame = -2
Query: 509 IGGLTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYI 330
IGGLTG+ A+ D+ LH+TY+V+AHFH +P TG +N +
Sbjct: 441 IGGLTGIFNADVPADLQLHNTYWVIAHFHIRCFGGVIFTWIAALYWWFPKVTGRKINEFW 500
Query: 329 LKIQFFTIFIGVNITFFPQHFLGL 258
K + F+ N TFFP GL
Sbjct: 501 GKFHAWWSFVFFNCTFFPMFIAGL 524
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 57.6 bits (133), Expect = 3e-07
Identities = 33/120 (27%), Positives = 56/120 (46%)
Frame = -2
Query: 623 MAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSMDITLHDTY 444
+++PT + I +AT+ + + IGG++GV ++ ++D +H Y
Sbjct: 340 ISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFMIGGVSGVTQSSLAIDTIVHGDY 399
Query: 443 YVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTIFIGVNITFFPQHFL 264
YVVAHFHY + +P TG + + +I + + GVNI +FP FL
Sbjct: 400 YVVAHFHYFMVGVAVMGLMGNLYYYFPKFTGRMYSEKLGRIHWAFAYPGVNILYFPMFFL 459
>UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21;
Prodoxidae|Rep: Cytochrome oxidase subunit I - Greya
powelli
Length = 52
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = -1
Query: 126 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 19
N+ I LFSLN+ SSIE QN PPAEHSYNELPIL N
Sbjct: 16 NKNIVLFSLNMNSSIEWLQNFPPAEHSYNELPILTN 51
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 56.0 bits (129), Expect = 8e-07
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Frame = -2
Query: 638 SAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSMDIT 459
S I + G F LA +PW++ + F + G GG G+I + +D T
Sbjct: 301 SVEIAARLRGGKGTFGWLAALPWDNPQMLALAFSFVMLGF----GGAGGLINMSYQLDTT 356
Query: 458 LHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSY-ILKIQFFTIFIGVNITF 282
+H+T ++ HFH + + + +P TG +L +++ Q + FIG+ +T
Sbjct: 357 IHNTQWITGHFHLIFAGAIVTMYFAIAYDLWPHLTGRALTHVRLMRWQLWLWFIGMIVTT 416
Query: 281 FPQHFLGL 258
FP H++G+
Sbjct: 417 FPWHWVGI 424
>UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71;
Pancrustacea|Rep: Cytochrome c oxidase subunit I -
Psilochaeta pampiana
Length = 76
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/75 (40%), Positives = 36/75 (48%)
Frame = -1
Query: 243 RYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINQRINLFSLNLPSSIE*YQNL 64
RY+DYP+ I QR+ LFS+ L SSIE QN
Sbjct: 1 RYADYPEVHTTWNVISTIGSTISFLGILYFFYIIWESLITQRMVLFSIQLCSSIEWLQNS 60
Query: 63 PPAEHSYNELPILRN 19
PPAEHSY+ELP+L N
Sbjct: 61 PPAEHSYSELPLLTN 75
>UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyche
norvegica|Rep: Cytochrome oxidase subunit I - Psyche
norvegica
Length = 63
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -1
Query: 123 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 19
QRI LF N+ SSIE +QN PPA HSY+E+PIL N
Sbjct: 28 QRILLFPSNMTSSIEWFQNTPPANHSYDEMPILIN 62
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = -2
Query: 641 TSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSMDI 462
++ + +A+P+G+K+ AT+ + I F + +GG+TGV +D
Sbjct: 304 SATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLLGGITGVFFPLVPIDY 363
Query: 461 TLHDTYYVVAHFHYVL 414
L+ TY+VV HFHY++
Sbjct: 364 ALNGTYFVVGHFHYMV 379
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/54 (50%), Positives = 31/54 (57%)
Frame = -2
Query: 647 YFTSAPIIMAVPTGIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVI 486
YFTSA +I+AVPTGIKIF LAT P + F +GGLTGVI
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 47.6 bits (108), Expect = 3e-04
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Frame = -2
Query: 608 GIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSMDITLHDTYYVVAH 429
G +F + +PW + P I + + +GG G++ A+ +M+ +H+T +V H
Sbjct: 313 GAGLFGWIGALPWKN----PMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGH 368
Query: 428 FHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILK-IQFFTIFIGVNITFFPQHFLGL 258
FH + + +P G L S L +Q + FIG+ I P H LGL
Sbjct: 369 FHLIFAGTVITMYLAVAYKLWPELCGRRLYSVDLALVQLWGWFIGMVIMTTPWHILGL 426
>UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79;
Pterygota|Rep: Cytochrome oxidase subunit I -
Biopyrellia bipuncta
Length = 68
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = -1
Query: 126 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 19
+QR +F + L SS+E QN PPAEHSYNELP+L N
Sbjct: 32 SQRQVIFPVQLNSSMEWLQNTPPAEHSYNELPLLVN 67
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = -2
Query: 674 VGIDMDPRAYFTSAPIIMAVPTGIKIF 594
VG+D D RAYFTSA +I+A+PTGIKIF
Sbjct: 295 VGLDADTRAYFTSATMIIAIPTGIKIF 321
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = -2
Query: 674 VGIDMDPRAYFTSAPIIMAVPTGIKIF 594
VG+D+D RAYFT+A +I+AVPTGIKIF
Sbjct: 4 VGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39;
Aphidoidea|Rep: Cytochrome oxidase subunit I - Pemphigus
microsetosus
Length = 68
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = -1
Query: 123 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 19
+++ +F LNL +SIE NLPP EHSY+ELP++ N
Sbjct: 33 KKMVMFKLNLNNSIEWIHNLPPLEHSYSELPLVTN 67
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -2
Query: 326 KIQFFTIFIGVNITFFPQHFLGLA 255
KI F +F+GVN+TFFPQHFLGLA
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGLA 423
>UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4;
Talitridae|Rep: Cytochrome oxidase subunit I - Talitrus
saltator
Length = 59
Score = 41.1 bits (92), Expect = 0.025
Identities = 14/36 (38%), Positives = 28/36 (77%)
Frame = -1
Query: 126 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 19
++R+ +F +++P+S+E + PPA+HSY++ P+L N
Sbjct: 23 SKRVYMFHMHMPTSLEWHHPSPPADHSYDDTPLLTN 58
>UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14;
Neoptera|Rep: Cytochrome oxidase subunit I - Kalotermes
flavicollis
Length = 57
Score = 40.7 bits (91), Expect = 0.033
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -1
Query: 126 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 25
N++I LF +SIE QNLPPAEHSY+ELP +
Sbjct: 21 NRQI-LFPTQTSNSIEWIQNLPPAEHSYSELPTI 53
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 40.3 bits (90), Expect = 0.044
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = -2
Query: 578 IPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSMDITLHDTYYVVAHFHYVLSXXXX 399
+PW P + ++ I GG G+I A+ ++++ +H+T ++ HFH +
Sbjct: 345 LPWRE----PSFTTQVLAMILFAFGGAGGLINASYNINLVVHNTSWISGHFHLTVGTAVT 400
Query: 398 XXXXXXXIN*YPLXTGLSLNSYILK-IQFFTIFIGVNITFFPQHFLGL 258
P TG L S + +Q +T F+G+ I H LGL
Sbjct: 401 LSFMGITYWLVPHLTGRRLWSPTMALVQAWTWFVGMGIFSHWMHMLGL 448
>UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5;
Eumalacostraca|Rep: Cytochrome oxidase subunit I -
Paguristes turgidus
Length = 68
Score = 40.3 bits (90), Expect = 0.044
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -1
Query: 111 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 19
+FSL+L SSIE + PPA+HSY E+P++ N
Sbjct: 37 MFSLSLASSIEWEHSYPPADHSYMEIPMISN 67
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 39.9 bits (89), Expect = 0.058
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -2
Query: 599 IFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSMDITLHDTYYVVAHFH 423
+F L + PW + F I FG +GG+TGV++ +++T H+T+ V HFH
Sbjct: 344 LFGWLTSGPWKNPVFSATIFSIILFGF---MGGITGVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 39.1 bits (87), Expect = 0.10
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = -2
Query: 521 IFIHIGGLTGVILANSSMDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLXTGLSL 342
+F GG+ G+I A+ ++ +H+T +VV HFH + P TG
Sbjct: 354 LFFIPGGIGGIINASFQLNEVVHNTLWVVGHFHITVGAPVAMTFYGLTFWLVPYLTGRPF 413
Query: 341 NSYILK---IQFFTIFIGVNITFFPQHFLGL 258
+ K IQ T +G+ + QH LGL
Sbjct: 414 SRLAKKLALIQVITWSLGMFLMSTAQHVLGL 444
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 39.1 bits (87), Expect = 0.10
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIFR*LATIPWNSN*LY--P*YFMKIRFGIFIHIG 504
T + +D RA+ T + +++A +G+ + TI + Y P + I IG
Sbjct: 58 TFPLPVDLRAWITVSTLVLASGSGLTVLNLGLTILTSKGYDYKDPLGMTFLIALIGFIIG 117
Query: 503 GLTGVILANSSMDITLHDTYYVVAHFHYVL 414
G+ + L + ++ +H+TYYVV HFHY++
Sbjct: 118 GVQALPLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 38.7 bits (86), Expect = 0.13
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = -2
Query: 521 IFIHIGGLTGVILANSSMDITLHDTYYVVAHFH 423
+ IGG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 353 VLFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 38.3 bits (85), Expect = 0.18
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = -2
Query: 608 GIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIH-IGGLTGVILANSSMDITLHDTYYVVA 432
G +F + +PW + + F I F I + I G +GV+ A+ +++ +H+T +VV
Sbjct: 315 GKGLFGWITALPWGKDPV----FTGITFAIILFGIAGFSGVVNASFNVNYNVHNTAWVVG 370
Query: 431 HFHYVLSXXXXXXXXXXXIN*YPLXTGLSLNSYILKIQFFTI-FIGVNITFFPQHFLGL 258
HFH + PL G + L I T+ F+G I H GL
Sbjct: 371 HFHLTVGGGVTLTFIATSFLLVPLLFGRDYVAKKLLIAVPTLWFVGQLIFGIGYHVAGL 429
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 37.9 bits (84), Expect = 0.24
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -2
Query: 599 IFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSMDITLHDTYYVVAHFH 423
+F L PW + + I FG +GG++GV + ++I +H+T YV HFH
Sbjct: 332 MFEWLRKAPWGNPVFSGMFLSLILFGF---LGGISGVTMGVEQINIMIHNTIYVPGHFH 387
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 37.9 bits (84), Expect = 0.24
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 448 VSCNVISIEELAKITPVNPPM*IKIPNLIFIKY*G-YN*FEFHGIVASHLKILIPVGTAI 624
VS N SI E PV PPM N I G ++ + +H K LIPVGT +
Sbjct: 10 VSWNKASITEAESTIPVTPPMVKSTXNPIIHHMIGSHSRSRVPASMYNHEKTLIPVGTPM 69
Query: 625 IIGAEVKYARGSISIPTVD 681
I+ E+K S PTV+
Sbjct: 70 IMVTELKKTAVPKSSPTVN 88
>UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21;
Aphidomorpha|Rep: Cytochrome c oxidase subunit I -
Phylloxera sp. DAD-2001a
Length = 83
Score = 37.9 bits (84), Expect = 0.24
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = -1
Query: 243 RYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINQRINLFSLNLPSSIE*YQNL 64
RYSDYP+ +++ +F LNL +SI N+
Sbjct: 8 RYSDYPNNYLTWNIMSSIGSMISTFSIIILIYWLWNSLFLKKMTIFKLNLNNSIGWIHNM 67
Query: 63 PPAEHSYNELPIL 25
PP H+Y+ELP++
Sbjct: 68 PPIGHTYSELPLI 80
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 36.7 bits (81), Expect = 0.54
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = -2
Query: 677 TVGIDMDPRAYFTSAPIIMAVPTGIKIF 594
TVG+D++ +F+S +I+ VPTGIK+F
Sbjct: 57 TVGLDVNTAVFFSSVTMIIRVPTGIKVF 84
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 36.3 bits (80), Expect = 0.72
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 491 VILANSSMDITLHDTYYVVAHFHYV 417
+ L+ D T HDTYYVVAH HY+
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL 53
>UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI
protein - Balanus crenatus
Length = 58
Score = 35.5 bits (78), Expect = 1.3
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -1
Query: 126 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELP 31
+QR +FS NL S++E PP HSY+ELP
Sbjct: 22 SQRPTIFSPNLSSNLEWVHTTPPHYHSYDELP 53
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 35.5 bits (78), Expect = 1.3
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = -2
Query: 506 GGLTGVILANSSMDITLHDTYYVVAHFH 423
GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 346 GGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 34.3 bits (75), Expect = 2.9
Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 1/119 (0%)
Frame = -2
Query: 608 GIKIFR*LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSMDITLHDTYYVVAH 429
G F L +PW P + G+ +G++ A +++ +H+T++VV H
Sbjct: 324 GSGYFGWLRALPWRD----PVFTGMALAGLMFAAAAFSGMVNAGMNINYLVHNTWWVVGH 379
Query: 428 FHYVLSXXXXXXXXXXXIN*YPLXTGLSL-NSYILKIQFFTIFIGVNITFFPQHFLGLA 255
FH + P TG L + Q F+G+ H GLA
Sbjct: 380 FHLTVGTAVALTFMAVSYWFLPQITGKKLWGKSVALAQVVLWFVGMTFMSNAMHRSGLA 438
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -2
Query: 506 GGLTGVILANSSMDITLHDTYYVVAHFH 423
GG+TG+I A+ +M+ +H+T +V HFH
Sbjct: 362 GGITGLINASFTMNQVVHNTTWVPGHFH 389
>UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Partamona helleri
Length = 88
Score = 33.5 bits (73), Expect = 5.1
Identities = 21/73 (28%), Positives = 29/73 (39%)
Frame = -1
Query: 243 RYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINQRINLFSLNLPSSIE*YQNL 64
RYSDYPD +++R+ LF + SS+E N
Sbjct: 5 RYSDYPDSYYCWNFISSMGSMISMNSLLFLIFTIFESFMSKRLILFKFH-QSSLEWLNNY 63
Query: 63 PPAEHSYNELPIL 25
PP H NE+P+L
Sbjct: 64 PPFNHMCNEIPLL 76
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 674 VGIDMDPRAYFTSAPIIMAVPTGIKIF 594
VG D+ +F+S +I+ VPTGIK+F
Sbjct: 35 VGFDVKTAVFFSSVTMIIGVPTGIKVF 61
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 33.5 bits (73), Expect = 5.1
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = -2
Query: 587 LATIPWNSN*LYP*YFMKIRFGIFIHIGGLTGVILANSSMDITLHDTYYVVAHFH 423
L +PW P + + G+ GG +G++ A +++ +H+T +V HFH
Sbjct: 339 LTDLPWRK----PEFTGMMLAGLMFAAGGFSGMVNAGMNINYMIHNTIWVPGHFH 389
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.1 bits (72), Expect = 6.7
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -2
Query: 509 IGGLTGVILANSSMDITLHDTYYVVAHFHYVL 414
+ G ++L +S++ H++YYVV HFH ++
Sbjct: 346 LAGAQALVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 32.7 bits (71), Expect = 8.8
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 503 GLTGVILANSSMDITLHDTYYVVAHFHYVL 414
G+TG+ A S D +H+T +VV HFH ++
Sbjct: 359 GVTGISNATISFDAIVHNTDWVVGHFHAMI 388
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,628,107
Number of Sequences: 1657284
Number of extensions: 9007268
Number of successful extensions: 17471
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 16895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17354
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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