Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0459
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   1.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   1.0  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.6  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 206 FHEIYESG*SEYRRGIQLNLKNVV 277
           FH IYE+    Y+ GIQ ++ N V
Sbjct: 141 FHLIYEAHGFSYKCGIQYHICNTV 164


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 206 FHEIYESG*SEYRRGIQLNLKNVV 277
           FH IYE+    Y+ GIQ ++ N V
Sbjct: 137 FHLIYEAHGFSYKCGIQYHICNTV 160


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -1

Query: 687 HIIHGRYRYGSTSIFYF 637
           H+    Y Y  T IF+F
Sbjct: 61  HVCFNSYMYAFTHIFFF 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,276
Number of Sequences: 336
Number of extensions: 2766
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)