Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0458
         (575 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    27   0.58 
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    26   0.76 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.3  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    24   3.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   5.4  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    23   7.1  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   9.4  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   9.4  

>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 26.6 bits (56), Expect = 0.58
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 365 LFSTTHVPHHIKADAQVRQQLNMSHST 445
           LFS+ H+P+H+ AD Q    L+   ST
Sbjct: 333 LFSSKHLPYHLDADEQQIPTLSEMVST 359


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 26.2 bits (55), Expect = 0.76
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 181 QVLPGDPCEPQSKPYNVVQETRKRKD*RKVSQT*LNIWTNCK 306
           QVLP     P   P   +  T KR+   + +++  ++WT CK
Sbjct: 256 QVLPWPALSPDLNPIENLWSTLKRQLKNQPARSADDLWTRCK 297


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 57  GRYTYVHCEGLPTC 98
           GRYT  +CE  PTC
Sbjct: 664 GRYTGRYCEKCPTC 677


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 181 QVLPGDPCEPQSKPYNVVQETRKRKD*RKVSQT*LNIWTNCK 306
           QVLP     P   P   +  T KR    + +++  ++WT C+
Sbjct: 184 QVLPWPALSPDLNPIENLWSTLKRHVKNQPARSADDLWTRCE 225


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +2

Query: 83  RPTYLSMSRSVLL-PICVPTPADRPSRSAYSTIGRSSLETRANLRASPT 226
           RP  L+   S L  P  +P  A RP   +  +  RS+ + RAN +   T
Sbjct: 586 RPNALASPASPLKSPSKIPGLARRPENISSESRSRSTSKQRANAKTPET 634


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 506 MSTCTVIIILNYIF 547
           M+ C VI++L+YIF
Sbjct: 58  MTPCMVIVMLSYIF 71


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 130 RSNTGGQAFPQCVFDHWQVLPGDPCE 207
           + N  G+   +C   +W ++ G+ CE
Sbjct: 912 KPNVIGRTCNECKNGYWNIVSGNGCE 937


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +2

Query: 107 RSVLLPICVPTPADRPSRSAYSTIGRSSLETRANL 211
           +++ + +C+PTP +R + + Y  + R  + T  NL
Sbjct: 227 KALTVRLCLPTPPNRLTNNGYWQL-RPHVLTERNL 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,555
Number of Sequences: 2352
Number of extensions: 13486
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)