Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0458
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor ... 160 3e-39
X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein. 160 3e-39
M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein. 160 3e-39
BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein. 160 3e-39
BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation f... 160 3e-39
AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 pro... 160 3e-39
D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein. 87 4e-17
CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein. 87 4e-17
BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GT... 87 4e-17
AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear ribonucle... 87 4e-17
AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens ... 81 3e-15
BC049210-1|AAH49210.1| 751|Homo sapiens G elongation factor, mi... 32 1.3
AF367998-1|AAK53402.1| 751|Homo sapiens elongation factor G1 pr... 32 1.3
AF309777-1|AAK58877.1| 751|Homo sapiens elongation factor G pro... 32 1.3
BC046150-1|AAH46150.1| 693|Homo sapiens TP53BP2 protein protein. 30 5.1
D37766-1|BAA22263.1| 1172|Homo sapiens Laminin-5 beta3 chain pro... 29 8.9
>Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor 2
protein.
Length = 858
Score = 160 bits (389), Expect = 3e-39
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +1
Query: 10 GVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVL 189
GVLNR+RGHVFEESQVAGTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQ+L
Sbjct: 761 GVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQIL 820
Query: 190 PGDPCEPQSKPYNVVQETRKRK 255
PGDP + S+P VV ETRKRK
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRK 842
>X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 160 bits (389), Expect = 3e-39
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +1
Query: 10 GVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVL 189
GVLNR+RGHVFEESQVAGTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQ+L
Sbjct: 761 GVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQIL 820
Query: 190 PGDPCEPQSKPYNVVQETRKRK 255
PGDP + S+P VV ETRKRK
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRK 842
>M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein.
Length = 358
Score = 160 bits (389), Expect = 3e-39
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +1
Query: 10 GVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVL 189
GVLNR+RGHVFEESQVAGTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQ+L
Sbjct: 261 GVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQIL 320
Query: 190 PGDPCEPQSKPYNVVQETRKRK 255
PGDP + S+P VV ETRKRK
Sbjct: 321 PGDPFDNSSRPSQVVAETRKRK 342
>BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein.
Length = 858
Score = 160 bits (389), Expect = 3e-39
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +1
Query: 10 GVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVL 189
GVLNR+RGHVFEESQVAGTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQ+L
Sbjct: 761 GVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQIL 820
Query: 190 PGDPCEPQSKPYNVVQETRKRK 255
PGDP + S+P VV ETRKRK
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRK 842
>BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation
factor 2b protein.
Length = 517
Score = 160 bits (389), Expect = 3e-39
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +1
Query: 10 GVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVL 189
GVLNR+RGHVFEESQVAGTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQ+L
Sbjct: 420 GVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQIL 479
Query: 190 PGDPCEPQSKPYNVVQETRKRK 255
PGDP + S+P VV ETRKRK
Sbjct: 480 PGDPFDNSSRPSQVVAETRKRK 501
>AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 160 bits (389), Expect = 3e-39
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +1
Query: 10 GVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVL 189
GVLNR+RGHVFEESQVAGTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQ+L
Sbjct: 761 GVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQIL 820
Query: 190 PGDPCEPQSKPYNVVQETRKRK 255
PGDP + S+P VV ETRKRK
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRK 842
>D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein.
Length = 977
Score = 87.0 bits (206), Expect = 4e-17
Identities = 34/65 (52%), Positives = 50/65 (76%)
Frame = +1
Query: 13 VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 192
VL RRRGHV +++ + G+P++ +KA++P +SFGF DLR++T GQAF VF HWQ++P
Sbjct: 854 VLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVP 913
Query: 193 GDPCE 207
GDP +
Sbjct: 914 GDPLD 918
>CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein.
Length = 972
Score = 87.0 bits (206), Expect = 4e-17
Identities = 34/65 (52%), Positives = 50/65 (76%)
Frame = +1
Query: 13 VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 192
VL RRRGHV +++ + G+P++ +KA++P +SFGF DLR++T GQAF VF HWQ++P
Sbjct: 849 VLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVP 908
Query: 193 GDPCE 207
GDP +
Sbjct: 909 GDPLD 913
>BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GTP
binding domain containing 2 protein.
Length = 972
Score = 87.0 bits (206), Expect = 4e-17
Identities = 34/65 (52%), Positives = 50/65 (76%)
Frame = +1
Query: 13 VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 192
VL RRRGHV +++ + G+P++ +KA++P +SFGF DLR++T GQAF VF HWQ++P
Sbjct: 849 VLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVP 908
Query: 193 GDPCE 207
GDP +
Sbjct: 909 GDPLD 913
>AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear
ribonucleoprotein component protein.
Length = 850
Score = 87.0 bits (206), Expect = 4e-17
Identities = 34/65 (52%), Positives = 50/65 (76%)
Frame = +1
Query: 13 VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 192
VL RRRGHV +++ + G+P++ +KA++P +SFGF DLR++T GQAF VF HWQ++P
Sbjct: 727 VLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVP 786
Query: 193 GDPCE 207
GDP +
Sbjct: 787 GDPLD 791
>AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens
cDNA FLJ13119 fis, clone NT2RP3002671, weakly similar to
ELONGATION FACTOR 2. ).
Length = 857
Score = 81.0 bits (191), Expect = 3e-15
Identities = 34/63 (53%), Positives = 43/63 (68%)
Frame = +1
Query: 13 VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 192
VL++R G V +E GT MFI+KA LPV ESFGF ++R T G A PQ VF HW+++P
Sbjct: 739 VLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIP 798
Query: 193 GDP 201
DP
Sbjct: 799 SDP 801
>BC049210-1|AAH49210.1| 751|Homo sapiens G elongation factor,
mitochondrial 1 protein.
Length = 751
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +1
Query: 16 LNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPG 195
+NRR G + + V F + A +P+N+ FG++ +LRS T G+ + +Q
Sbjct: 668 INRRHGVITGQDGVED--YFTLYADVPLNDMFGYSTELRSCTEGKGEYTMEYSRYQ---- 721
Query: 196 DPCEPQSK 219
PC P ++
Sbjct: 722 -PCLPSTQ 728
>AF367998-1|AAK53402.1| 751|Homo sapiens elongation factor G1
protein.
Length = 751
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +1
Query: 16 LNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPG 195
+NRR G + + V F + A +P+N+ FG++ +LRS T G+ + +Q
Sbjct: 668 INRRHGVITGQDGVED--YFTLYADVPLNDMFGYSTELRSCTEGKGEYTMEYSRYQ---- 721
Query: 196 DPCEPQSK 219
PC P ++
Sbjct: 722 -PCLPSTQ 728
>AF309777-1|AAK58877.1| 751|Homo sapiens elongation factor G
protein.
Length = 751
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +1
Query: 16 LNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPG 195
+NRR G + + V F + A +P+N+ FG++ +LRS T G+ + +Q
Sbjct: 668 INRRHGVITGQDGVED--YFTLYADVPLNDMFGYSTELRSCTEGKGEYTMEYSRYQ---- 721
Query: 196 DPCEPQSK 219
PC P ++
Sbjct: 722 -PCLPSTQ 728
>BC046150-1|AAH46150.1| 693|Homo sapiens TP53BP2 protein protein.
Length = 693
Score = 30.3 bits (65), Expect = 5.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 148 QAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRK 255
Q P+ ++ + Q PG P EP+++P + VQE ++K
Sbjct: 657 QQHPENIYSNSQGKPGSP-EPETEPVSSVQENHEKK 691
>D37766-1|BAA22263.1| 1172|Homo sapiens Laminin-5 beta3 chain
protein.
Length = 1172
Score = 29.5 bits (63), Expect = 8.9
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 91 LPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEP-QSKPYNVVQET 243
+P +E G L N G QC HW++ G CEP P+N Q T
Sbjct: 442 MPCDEESGRCLCL-PNVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSPQPT 492
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,236,307
Number of Sequences: 237096
Number of extensions: 1761663
Number of successful extensions: 3912
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3905
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -