Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0458
         (575 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    23   2.2  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    23   2.2  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    23   2.2  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   6.6  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   8.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   8.7  

>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 514 LYCNYYFKLYF 546
           LYCN Y KLY+
Sbjct: 99  LYCNNYKKLYY 109


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 514 LYCNYYFKLYF 546
           LYCN Y KLY+
Sbjct: 99  LYCNNYKKLYY 109


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 514 LYCNYYFKLYF 546
           LYCN Y KLY+
Sbjct: 99  LYCNNYRKLYY 109


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 511 YLYCNYYFKLYFFSIVKKKK 570
           ++  NY+  LYF S+V+ ++
Sbjct: 16  FILINYFIFLYFNSLVRFRR 35


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 496 HNNVIPKKRYSLVYNLFS 443
           H+  +P K+Y  V  LFS
Sbjct: 398 HSRPVPAKKYDCVTLLFS 415


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 496 HNNVIPKKRYSLVYNLFS 443
           H+  +P K+Y  V  LFS
Sbjct: 398 HSRPVPAKKYDCVTLLFS 415


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,523
Number of Sequences: 438
Number of extensions: 3508
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)