Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0457
(700 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 51 4e-08
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 40 8e-05
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 36 0.001
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 36 0.002
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 34 0.005
AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse t... 33 0.009
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 33 0.009
AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse t... 32 0.020
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 31 0.026
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 31 0.046
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 30 0.081
AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse t... 29 0.11
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 28 0.33
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 26 0.99
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 25 1.7
AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse t... 25 3.0
Y08163-1|CAA69355.1| 192|Anopheles gambiae hypothetical protein... 24 4.0
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 23 7.0
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 50.8 bits (116), Expect = 4e-08
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = +2
Query: 221 GSSLLQRRKSVHKVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPL 400
G +LL K+ +WH GL+ KL + P L+ I+ F+SNR + + + SS
Sbjct: 68 GLALLDTEKAFDSIWHQGLLSKLIKLN-FPSYLINIVNSFISNRQNKVHILNSTSSTYTP 126
Query: 401 TAGVPQG 421
AGVPQG
Sbjct: 127 KAGVPQG 133
Score = 39.9 bits (89), Expect = 8e-05
Identities = 27/80 (33%), Positives = 35/80 (43%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL + I+ QFGFR + S Q+HR+T +I+
Sbjct: 1 SYRPISLLSCLGKIFEKLLESRMALHTFNNNIIPKSQFGFRPSLSTTHQLHRVTNNIV-- 58
Query: 195 LNRPKXLYTGALFFNVAKAF 254
NR TG + KAF
Sbjct: 59 HNRCNRKSTGLALLDTEKAF 78
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 39.9 bits (89), Expect = 8e-05
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 266 HNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXX 445
H L+ KL +G +P LV ++ +L +R++ +++ S ++GVPQG
Sbjct: 696 HAILLAKLDKLG-IPSPLVQWLKSYLIHRTYIVKIDKHMSKEIVSSSGVPQGSNIGPLLF 754
Query: 446 XXXXNDIPWS-PPTHLALFAD 505
ND+ + PP ++LFAD
Sbjct: 755 ILFINDVTLALPPDSISLFAD 775
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 35.9 bits (79), Expect = 0.001
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 266 HNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXX 445
H+ L+ KL +G D ++ + +LSNRS R + S T+GVPQG
Sbjct: 625 HSLLLAKLSKLG-FGDGIISWLSSYLSNRSCRVKTGSYLSEEFFCTSGVPQGCVLSPLLF 683
Query: 446 XXXXNDI-PWSPPTHLALFAD 505
ND+ PP L+AD
Sbjct: 684 SLFINDVCNVLPPDGHLLYAD 704
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 35.5 bits (78), Expect = 0.002
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Frame = +2
Query: 305 VPDSLVLIIRDFLSNRSFRYRVEGTRSSP--RPLTAGVPQGXXXXXXXXXXXXN---DIP 469
VP L II + +R Y T P R +TAGVPQG + DI
Sbjct: 592 VPAGLQRIIHSYFQDRELVYE---TSEGPVVRSVTAGVPQGSILGPTLWNTMYDGVLDIA 648
Query: 470 WSPPTHLALFADTSTRRHDCLLFQ*KQVPNREEAS--ERSLALGQWFRKWRIDINPAKST 643
P + +AD D +L P+ +A+ E +++ +W + +++ PAK+
Sbjct: 649 LPPDAEILGYAD------DLVLLVPGTTPDNVKAAAEEAIISVMEWMARHHLELAPAKTE 702
Query: 644 AVLFSDGKLHT 676
V+ S K T
Sbjct: 703 MVVISSTKAPT 713
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 33.9 bits (74), Expect = 0.005
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 4/128 (3%)
Frame = +2
Query: 296 MGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXN---DI 466
M VP L I+R + NR + + R +TAGVPQG + D+
Sbjct: 656 MKGVPAGLQRIVRSYFENRELVFETSDGPVT-RSITAGVPQGSILGPTLWNTMYDGVLDV 714
Query: 467 PWSPPTHLALFADTSTRRHDCLLFQ*KQVPNREEASERSLA-LGQWFRKWRIDINPAKST 643
+ +AD LL V + A+E ++A + W + + I P K+
Sbjct: 715 ALPQDCEMVAYADDLV-----LLIPGIDVNAVKAAAEEAVASVSHWMAQHHLQIAPEKTE 769
Query: 644 AVLFSDGK 667
VL S K
Sbjct: 770 CVLISSTK 777
>AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 33.1 bits (72), Expect = 0.009
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 257 KVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 421
++ H L+ KL +G +PD LV +R +L R++ R+ S ++GVPQG
Sbjct: 78 RISHVILLAKLDRLG-LPDPLVAWLRSYLMGRTYSVRMGPHLSRSLRASSGVPQG 131
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 33.1 bits (72), Expect = 0.009
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILV- 191
S RPI LL + L D+QFGFR+ S V + R+ + + V
Sbjct: 473 SVRPICLLDGAGKGLERIIVQRLNAHIEEVNGLSDDQFGFRSRRSTVDAIQRVVDIVSVA 532
Query: 192 -GLNRPKXLYTGALFFNVAKAFTKS 263
NR Y + +V AF +
Sbjct: 533 RSRNRYSGRYCAVVTLDVTNAFNSA 557
>AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 31.9 bits (69), Expect = 0.020
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 257 KVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 421
++ H L+ KL +G +PD LV +R +L R++ R+ S ++GVPQG
Sbjct: 78 RISHVILLAKLDRLG-LPDPLVAWLRSYLMGRTYSVRMGPHLSRFLRASSGVPQG 131
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 31.5 bits (68), Expect = 0.026
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Frame = +2
Query: 305 VPDSLVLIIRDFLSNRSFRYRVEGTRSSP--RPLTAGVPQGXXXXXXXXXXXXN---DIP 469
VP L ++R + +R + T P R +TAGVPQG + D+P
Sbjct: 652 VPVGLQRMLRSYFEDRVLYF---DTSEGPVVRHVTAGVPQGSILGPTLWNIMYDGVLDVP 708
Query: 470 WSPPTHLALFADTSTRRHDCLLFQ*KQVPN-REEASERSLALGQWFRKWRIDINPAKSTA 646
P + +AD LL R A E + +W ++ +++ PAK+ A
Sbjct: 709 LPPDVEVIGYADDLA-----LLVPATTTDEVRARAEEAVDQVQRWMQQHGLELAPAKTEA 763
Query: 647 VLFSDGK 667
VL S K
Sbjct: 764 VLISSKK 770
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 30.7 bits (66), Expect = 0.046
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 305 VPDSLVLIIRDFLSNRSFRYRVEGTRSSP--RPLTAGVPQG 421
VP L I+RD+ +NR Y T P R +TAGVPQG
Sbjct: 598 VPRQLRNILRDYFANRELVY---DTADGPVTRRVTAGVPQG 635
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 29.9 bits (64), Expect = 0.081
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 5/123 (4%)
Frame = +2
Query: 305 VPDSLVLIIRDFLSNRSFRYRV-EGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDI---PW 472
+P L II ++ NR Y EG R R +TAGVPQG N++
Sbjct: 576 IPKYLYDIIGNYFRNRVLLYETNEGNRE--RVVTAGVPQGSVLGPTLWNLMYNEVLGLTL 633
Query: 473 SPPTHLALFADTSTRRHDCLLFQ*KQVPNREEASERSL-ALGQWFRKWRIDINPAKSTAV 649
L FAD L+ ++ + E E S+ + QW + +N +K+ +
Sbjct: 634 YDGASLIGFADDIV-----LVAVGSRIDDLENTIETSINIIRQWMESVELQLNISKTEYI 688
Query: 650 LFS 658
L S
Sbjct: 689 LVS 691
>AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 29.5 bits (63), Expect = 0.11
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 266 HNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 421
H L+ KL N P SLV ++ +L NR++ +++ S ++GVPQG
Sbjct: 81 HAILLAKL-NKVRFPCSLVQWLKSYLINRTYIVKIDKHMSKKIVSSSGVPQG 131
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 27.9 bits (59), Expect = 0.33
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 305 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQG 421
+P L ++R +L +R F Y LTAGVPQG
Sbjct: 567 IPPYLCRLLRSYLDHRVFLYDT-ALGIKKMSLTAGVPQG 604
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 26.2 bits (55), Expect = 0.99
Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +3
Query: 18 YRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTN-HSCVQQVHRLTEHILVG 194
YRP++ L + D + ++ +EQ G R N C QV + + ++VG
Sbjct: 534 YRPLTCLSNLNKVLSSVITQKVKDHCDTNNVMTEEQTGRRKNTQGCKDQV--IIDAVIVG 591
Query: 195 LNRPKXLYTGALFFNVAKAF 254
K + + KA+
Sbjct: 592 QAAKKQRNLDMAYIDYKKAY 611
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 25.4 bits (53), Expect = 1.7
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 12 TSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGI--LIDEQFGFRTNHSCVQQVHRLTE 179
+S+RPI LL + +++ L ++QFGFR S +Q + ++ +
Sbjct: 497 SSFRPICLLDNTGKALERLLLNRLNEYIEDPESPQLSEQQFGFRRGRSTLQAIQQVVD 554
>AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse
transcriptase protein.
Length = 131
Score = 24.6 bits (51), Expect = 3.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 257 KVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVE 373
+V H L+ KL +G SLV + +L+NR +R +V+
Sbjct: 78 RVNHRLLLAKLARLG-FSASLVEWLESYLTNRRYRVKVD 115
>Y08163-1|CAA69355.1| 192|Anopheles gambiae hypothetical protein
protein.
Length = 192
Score = 24.2 bits (50), Expect = 4.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 581 SLALGQWFRKWRIDINPAKSTAVLFSD 661
+L +G +FR WR I+ K A + S+
Sbjct: 79 TLGVGSFFRAWRNCIDEGKGLATIESE 105
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 23.4 bits (48), Expect = 7.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 257 CERFCDVEEESSRV*RFWSIKPHKNVL 177
C R + E SR+ RFWS + ++L
Sbjct: 254 CVRLINTEWPRSRMARFWSFETSTDML 280
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,711
Number of Sequences: 2352
Number of extensions: 15031
Number of successful extensions: 102
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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