Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0457
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY971516-1|AAY40743.1|  328|Homo sapiens SIGLEC-15 protein.            30   9.1  
AK172835-1|BAD18800.1|  328|Homo sapiens protein ( Homo sapiens ...    30   9.1  

>AY971516-1|AAY40743.1|  328|Homo sapiens SIGLEC-15 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
 Frame = +1

Query: 490 SFIRRHVDTTTRLFTIPVETSP*SRRSFRAQP------SPRTVVP-KMAHRHQPSEKYCG 648
           SF+R  +DTT  L    V +SP  R S +  P          V+P    H H+  +    
Sbjct: 19  SFVRTKIDTTENLLNTEVHSSPAQRWSMQVPPEVSAEAGDAAVLPCTFTHPHRHYDGPLT 78

Query: 649 AIFRWEAPHGFP 684
           AI+R   P+  P
Sbjct: 79  AIWRAGEPYAGP 90


>AK172835-1|BAD18800.1|  328|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23996 fis, clone HRC12337. ).
          Length = 328

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
 Frame = +1

Query: 490 SFIRRHVDTTTRLFTIPVETSP*SRRSFRAQP------SPRTVVP-KMAHRHQPSEKYCG 648
           SF+R  +DTT  L    V +SP  R S +  P          V+P    H H+  +    
Sbjct: 19  SFVRTKIDTTENLLNTEVHSSPAQRWSMQVPPEVSAEAGDAAVLPCTFTHPHRHYDGPLT 78

Query: 649 AIFRWEAPHGFP 684
           AI+R   P+  P
Sbjct: 79  AIWRAGEPYAGP 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,643,551
Number of Sequences: 237096
Number of extensions: 2322196
Number of successful extensions: 7875
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7861
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)