Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0457
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 73 4e-13
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 73 4e-13
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 66 3e-11
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 66 3e-11
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 66 6e-11
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 56 5e-08
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 54 1e-07
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 54 1e-07
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 54 1e-07
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 54 1e-07
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 53 3e-07
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 53 4e-07
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 53 4e-07
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 52 8e-07
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 51 2e-06
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 51 2e-06
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 51 2e-06
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 51 2e-06
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 51 2e-06
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 50 2e-06
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 46 5e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 38 0.017
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 38 0.017
BT011408-1|AAR96200.1| 1046|Drosophila melanogaster AT20689p pro... 29 6.1
AE014297-3677|AAN14027.1| 1193|Drosophila melanogaster CG6238-PB... 29 6.1
AE014297-3676|AAF56372.3| 1192|Drosophila melanogaster CG6238-PA... 29 6.1
AB036834-1|BAA89534.1| 1045|Drosophila melanogaster MAP kinase p... 29 6.1
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 72.9 bits (171), Expect = 4e-13
Identities = 46/144 (31%), Positives = 77/144 (53%)
Frame = +2
Query: 260 VWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXX 439
VWH+GL+ KL +G P L+ I+++FL++R F + ++S+ R L AGVPQG
Sbjct: 617 VWHDGLLHKLKMIGT-PIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPT 675
Query: 440 XXXXXXNDIPWSPPTHLALFADTSTRRHDCLLFQ*KQVPNREEASERSLALGQWFRKWRI 619
+DIP + L+LFAD + F ++ ++ L + +++KW+I
Sbjct: 676 LFNIFTHDIPQATNCVLSLFADDAAVY--SAGFSYSEINQSMQSYLNELDI--YYKKWKI 731
Query: 620 DINPAKSTAVLFSDGKLHTDFLPD 691
INP K+ A+ F+ + +LPD
Sbjct: 732 KINPNKTNAIFFTK-RRKPRYLPD 754
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 72.9 bits (171), Expect = 4e-13
Identities = 46/144 (31%), Positives = 77/144 (53%)
Frame = +2
Query: 260 VWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXX 439
VWH+GL+ KL +G P L+ I+++FL++R F + ++S+ R L AGVPQG
Sbjct: 565 VWHDGLLHKLKMIGT-PIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPT 623
Query: 440 XXXXXXNDIPWSPPTHLALFADTSTRRHDCLLFQ*KQVPNREEASERSLALGQWFRKWRI 619
+DIP + L+LFAD + F ++ ++ L + +++KW+I
Sbjct: 624 LFNIFTHDIPQATNCVLSLFADDAAVY--SAGFSYSEINQSMQSYLNELDI--YYKKWKI 679
Query: 620 DINPAKSTAVLFSDGKLHTDFLPD 691
INP K+ A+ F+ + +LPD
Sbjct: 680 KINPNKTNAIFFTK-RRKPRYLPD 702
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 66.5 bits (155), Expect = 3e-11
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Frame = +2
Query: 227 SLLQRRKSVHKVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTA 406
+ L +++ +VWH GL++K + P L L+++ FL R+F V+G +SS +P+ A
Sbjct: 583 AFLDIQQAFDRVWHPGLLYKAKRL--FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAA 640
Query: 407 GVPQGXXXXXXXXXXXXNDIPWSPPTHLALFADT--STRRHD-CLLFQ*KQVPNREEASE 577
GVPQG +D+P P D +T D +L + K + +
Sbjct: 641 GVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQ 700
Query: 578 RSL-ALGQWFRKWRIDINPAKSTAVLFSD 661
L A QW W + IN K V F++
Sbjct: 701 EYLDAFQQWAENWNVRINAEKCANVTFAN 729
Score = 33.5 bits (73), Expect = 0.28
Identities = 22/82 (26%), Positives = 32/82 (39%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRP SLL S + QFGFR H +Q+HR+ L
Sbjct: 514 SYRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEA 573
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
+ + Y F ++ +AF +
Sbjct: 574 MENKE--YAVGAFLDIQQAFDR 593
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 66.5 bits (155), Expect = 3e-11
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Frame = +2
Query: 227 SLLQRRKSVHKVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTA 406
+ L +++ +VWH GL++K + P L L+++ FL R+F V+G +SS +P+ A
Sbjct: 385 AFLDIQQAFDRVWHPGLLYKAKRL--FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAA 442
Query: 407 GVPQGXXXXXXXXXXXXNDIPWSPPTHLALFADT--STRRHD-CLLFQ*KQVPNREEASE 577
GVPQG +D+P P D +T D +L + K + +
Sbjct: 443 GVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQ 502
Query: 578 RSL-ALGQWFRKWRIDINPAKSTAVLFSD 661
L A QW W + IN K V F++
Sbjct: 503 EYLDAFQQWAENWNVRINAEKCANVTFAN 531
Score = 35.5 bits (78), Expect = 0.070
Identities = 23/82 (28%), Positives = 33/82 (40%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL S + QFGFR H +Q+HR+ L
Sbjct: 316 SYRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEA 375
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
+ + Y F ++ +AF +
Sbjct: 376 MENKE--YAVGAFLDIQQAFDR 395
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 65.7 bits (153), Expect = 6e-11
Identities = 35/82 (42%), Positives = 47/82 (57%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL S D ++ + IL D QFGFR HS V+QVHRLT+HIL
Sbjct: 513 SYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQA 572
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
+ + Y A+F ++ +AF +
Sbjct: 573 FDDKE--YCNAVFIDMQQAFDR 592
Score = 56.8 bits (131), Expect = 3e-08
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Frame = +2
Query: 233 LQRRKSVHKVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGV 412
+ +++ +VWH+GLI K+ + P VL + +L +R F RV + S PR + AGV
Sbjct: 584 IDMQQAFDRVWHDGLISKVKKLFPAPYYGVL--KSYLEDRRFMVRVRNSYSIPRVMRAGV 641
Query: 413 PQGXXXXXXXXXXXXNDIPWSPPTHLA--LFADTSTRRHDCLLFQ*KQVPNR--EEASER 580
PQG D+P H+A A +T D L N E
Sbjct: 642 PQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEY 701
Query: 581 SLALGQWFRKWRIDINPAKSTAVLFS 658
L W ++W + +NP K+ F+
Sbjct: 702 LTTLAAWCKRWILKVNPQKTINPCFT 727
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 56.0 bits (129), Expect = 5e-08
Identities = 29/82 (35%), Positives = 43/82 (52%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL S + ++GI + QFGFR H V+Q+HR+ E IL
Sbjct: 512 SYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTA 571
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
+ + Y +LF ++ +AF +
Sbjct: 572 YDSKE--YCNSLFLDIREAFDR 591
Score = 52.4 bits (120), Expect = 6e-07
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Frame = +2
Query: 224 SSLLQRRKSVHKVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLT 403
S L R++ +VWH GL K+ +P +++ +L R F R S+ +
Sbjct: 580 SLFLDIREAFDRVWHIGLQLKIKQ--TLPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVA 637
Query: 404 AGVPQGXXXXXXXXXXXXNDIPWSPPTHLALFADTSTRRHD-CLLFQ*K-QVPNREEASE 577
AGVPQG +D+P P L + +T D C+ ++ + + + +
Sbjct: 638 AGVPQGSVLGPLLYCLYSHDMP-QPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQD 696
Query: 578 RSLALGQWFRKWRIDINPAKSTAVLFS 658
+ +W R+W I IN +KS V F+
Sbjct: 697 FAYRFSEWARRWNIGINSSKSNNVCFT 723
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 54.4 bits (125), Expect = 1e-07
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Frame = +2
Query: 224 SSLLQRRKSVHKVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPL 400
++ L ++ +VWH+GL++KL + +P L ++ ++LSNR+F R++G T S +
Sbjct: 181 ATFLDITEAFDRVWHDGLLYKLSRL--IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNI 238
Query: 401 TAGVPQGXXXXXXXXXXXXNDIPWS-----------PPTHLALFADTSTRRHDCLLFQ*K 547
AGVPQG +D+P+ P H + +L + K
Sbjct: 239 RAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSK 298
Query: 548 QVPNREEASERSL-ALGQWFRKWRIDINPAKSTAVLFSDGKLHTD 679
++ L +W +KW I IN K+ +LFS K T+
Sbjct: 299 YTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 343
Score = 39.9 bits (89), Expect = 0.003
Identities = 25/82 (30%), Positives = 35/82 (42%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL D S + QFGFR +H Q+ R+T+ IL
Sbjct: 113 SYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKA 172
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
+ A F ++ +AF +
Sbjct: 173 FDEKD--VCSATFLDITEAFDR 192
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 54.4 bits (125), Expect = 1e-07
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Frame = +2
Query: 224 SSLLQRRKSVHKVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPL 400
++ L ++ +VWH+GL++KL + +P L ++ ++LSNR+F R++G T S +
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKLSRL--IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNI 685
Query: 401 TAGVPQGXXXXXXXXXXXXNDIPWS-----------PPTHLALFADTSTRRHDCLLFQ*K 547
AGVPQG +D+P+ P H + +L + K
Sbjct: 686 RAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSK 745
Query: 548 QVPNREEASERSL-ALGQWFRKWRIDINPAKSTAVLFSDGKLHTD 679
++ L +W +KW I IN K+ +LFS K T+
Sbjct: 746 YTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Score = 39.9 bits (89), Expect = 0.003
Identities = 25/82 (30%), Positives = 35/82 (42%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL D S + QFGFR +H Q+ R+T+ IL
Sbjct: 560 SYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKA 619
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
+ A F ++ +AF +
Sbjct: 620 FDEKD--VCSATFLDITEAFDR 639
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 54.4 bits (125), Expect = 1e-07
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Frame = +2
Query: 224 SSLLQRRKSVHKVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPL 400
++ L ++ +VWH+GL++KL + +P L ++ ++LSNR+F R++G T S +
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKLSRL--IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNI 685
Query: 401 TAGVPQGXXXXXXXXXXXXNDIPWS-----------PPTHLALFADTSTRRHDCLLFQ*K 547
AGVPQG +D+P+ P H + +L + K
Sbjct: 686 RAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSK 745
Query: 548 QVPNREEASERSL-ALGQWFRKWRIDINPAKSTAVLFSDGKLHTD 679
++ L +W +KW I IN K+ +LFS K T+
Sbjct: 746 YTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Score = 39.9 bits (89), Expect = 0.003
Identities = 25/82 (30%), Positives = 35/82 (42%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL D S + QFGFR +H Q+ R+T+ IL
Sbjct: 560 SYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKA 619
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
+ A F ++ +AF +
Sbjct: 620 FDEKD--VCSATFLDITEAFDR 639
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 54.4 bits (125), Expect = 1e-07
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Frame = +2
Query: 224 SSLLQRRKSVHKVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPL 400
++ L ++ +VWH+GL++KL + +P L ++ ++LSNR+F R++G T S +
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKLSRL--IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNI 685
Query: 401 TAGVPQGXXXXXXXXXXXXNDIPWS-----------PPTHLALFADTSTRRHDCLLFQ*K 547
AGVPQG +D+P+ P H + +L + K
Sbjct: 686 RAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSK 745
Query: 548 QVPNREEASERSL-ALGQWFRKWRIDINPAKSTAVLFSDGKLHTD 679
++ L +W +KW I IN K+ +LFS K T+
Sbjct: 746 YTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Score = 39.9 bits (89), Expect = 0.003
Identities = 25/82 (30%), Positives = 35/82 (42%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL D S + QFGFR +H Q+ R+T+ IL
Sbjct: 560 SYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKA 619
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
+ A F ++ +AF +
Sbjct: 620 FDEKD--VCSATFLDITEAFDR 639
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 53.2 bits (122), Expect = 3e-07
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Frame = +2
Query: 257 KVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXX 433
+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 636 RVWHEGLLLKLAKI--LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLG 693
Query: 434 XXXXXXXXNDIP----WSP-PTHLALFADTSTRRHDCLLFQ*KQVPNREEASERSL--AL 592
+D+P + P PT + ST D ++ + + + +
Sbjct: 694 PLLYSIFSSDMPLPYIYRPSPTERIML---STYADDTIVLSSDTLATAATRNNENYLKSF 750
Query: 593 GQWFRKWRIDINPAKSTAVLFS 658
W KW I +N AK+ V+F+
Sbjct: 751 SDWADKWGISVNAAKTGHVIFT 772
Score = 44.0 bits (99), Expect = 2e-04
Identities = 27/82 (32%), Positives = 38/82 (46%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL K + QFGFR H QQ+ R+T+ IL
Sbjct: 557 SYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKEHGSEQQIARVTQFILEA 616
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
R + Y A+F ++++AF +
Sbjct: 617 FERKE--YCSAVFLDISEAFDR 636
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 52.8 bits (121), Expect = 4e-07
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Frame = +2
Query: 257 KVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXX 436
+VW +GL+FK+ + +P + +++ +L NR F R + + S + AGVPQG
Sbjct: 587 RVWLDGLLFKIIKL--LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGP 644
Query: 437 XXXXXXXNDIPWSPPTHLALFADTSTRRHDCLLFQ*KQVPNREEA--SERSLALGQWFRK 610
D P + FAD D + + P + A S ++ +W
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFAD------DTAILSRSKCPIKATALLSRHLTSVERWLAD 698
Query: 611 WRIDINPAKSTAVLFSDGK 667
WRI IN K V F+ K
Sbjct: 699 WRISINVQKCKQVTFTLNK 717
Score = 46.4 bits (105), Expect = 4e-05
Identities = 27/83 (32%), Positives = 38/83 (45%)
Frame = +3
Query: 12 TSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILV 191
+SYRPISLL + L QFGFR H ++QV+R+T I
Sbjct: 507 SSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRT 566
Query: 192 GLNRPKXLYTGALFFNVAKAFTK 260
+ Y A+F +VA+AF +
Sbjct: 567 AFEHRE--YCTAIFLDVAQAFDR 587
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 52.8 bits (121), Expect = 4e-07
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Frame = +2
Query: 257 KVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXX 433
+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 648 RVWHEGLLLKLAKI--LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLG 705
Query: 434 XXXXXXXXNDIP----WSP-PTHLALFADTSTRRHDCLLFQ*KQVPNREEASERSL--AL 592
+D+P + P PT + ST D ++ + + +
Sbjct: 706 PLLYSIFSSDMPLPYIYRPSPTQRIML---STYADDTIVLSSDTLATAATRNNENYLKTF 762
Query: 593 GQWFRKWRIDINPAKSTAVLFS 658
W KW I +N AK+ V+F+
Sbjct: 763 SDWADKWGISVNAAKTGHVIFT 784
Score = 43.6 bits (98), Expect = 3e-04
Identities = 27/82 (32%), Positives = 38/82 (46%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL K + QFGFR H QQ+ R+T+ IL
Sbjct: 569 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 628
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
R + Y A+F ++++AF +
Sbjct: 629 FERKE--YCSAVFLDISEAFDR 648
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 52.0 bits (119), Expect = 8e-07
Identities = 35/134 (26%), Positives = 60/134 (44%)
Frame = +2
Query: 257 KVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXX 436
KVW +GL+FK+ ++P+S +++ +L +R F R S+ + AGVPQG
Sbjct: 589 KVWLDGLMFKI--KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGP 646
Query: 437 XXXXXXXNDIPWSPPTHLALFADTSTRRHDCLLFQ*KQVPNREEASERSLALGQWFRKWR 616
DIP + ++ FAD + L + + + + + +W WR
Sbjct: 647 TLYLIYTADIPTNSRLTVSTFADDTA----ILSRSRSPIQATAQLALYLIDIKKWLSDWR 702
Query: 617 IDINPAKSTAVLFS 658
I +N K V F+
Sbjct: 703 IKVNEQKCKHVTFT 716
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/84 (33%), Positives = 41/84 (48%)
Frame = +3
Query: 9 ATSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 188
A+SYRPISLL + I+ QFGFR +H ++QV+R+T I
Sbjct: 508 ASSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIR 567
Query: 189 VGLNRPKXLYTGALFFNVAKAFTK 260
+ Y A+F +V++AF K
Sbjct: 568 TAFEYRE--YCTAVFLDVSQAFDK 589
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 50.8 bits (116), Expect = 2e-06
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Frame = +2
Query: 257 KVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXX 433
+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 520 RVWHEGLLLKLAKI--LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLG 577
Query: 434 XXXXXXXXNDIP----WSP-PTH---LALFADTSTRRHDCLLFQ*KQVPNREEASERSLA 589
+D+P + P PT L+ +AD + +L N E +
Sbjct: 578 PILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILAT-AATRNNENYLK---T 633
Query: 590 LGQWFRKWRIDINPAKSTAVLFS 658
W KW I +N AK+ V+++
Sbjct: 634 FSDWADKWGISVNAAKTGHVIYT 656
Score = 43.6 bits (98), Expect = 3e-04
Identities = 27/82 (32%), Positives = 38/82 (46%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL K + QFGFR H QQ+ R+T+ IL
Sbjct: 441 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 500
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
R + Y A+F ++++AF +
Sbjct: 501 FERKE--YCSAVFLDISEAFDR 520
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.8 bits (116), Expect = 2e-06
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Frame = +2
Query: 257 KVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXX 433
+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 636 RVWHEGLLLKLAKI--LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLG 693
Query: 434 XXXXXXXXNDIP----WSP-PTH---LALFADTSTRRHDCLLFQ*KQVPNREEASERSLA 589
+D+P + P PT L+ +AD + +L N E +
Sbjct: 694 PILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILAT-AATRNNENYLK---T 749
Query: 590 LGQWFRKWRIDINPAKSTAVLFS 658
W KW I +N AK+ V+++
Sbjct: 750 FSDWADKWGISVNAAKTGHVIYT 772
Score = 43.6 bits (98), Expect = 3e-04
Identities = 27/82 (32%), Positives = 38/82 (46%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL K + QFGFR H QQ+ R+T+ IL
Sbjct: 557 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 616
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
R + Y A+F ++++AF +
Sbjct: 617 FERKE--YCSAVFLDISEAFDR 636
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.8 bits (116), Expect = 2e-06
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Frame = +2
Query: 257 KVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXX 433
+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 636 RVWHEGLLLKLAKI--LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLG 693
Query: 434 XXXXXXXXNDIP----WSP-PTH---LALFADTSTRRHDCLLFQ*KQVPNREEASERSLA 589
+D+P + P PT L+ +AD + +L N E +
Sbjct: 694 PILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILAT-AATRNNENYLK---T 749
Query: 590 LGQWFRKWRIDINPAKSTAVLFS 658
W KW I +N AK+ V+++
Sbjct: 750 FSDWADKWGISVNAAKTGHVIYT 772
Score = 43.6 bits (98), Expect = 3e-04
Identities = 27/82 (32%), Positives = 38/82 (46%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL K + QFGFR H QQ+ R+T+ IL
Sbjct: 557 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 616
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
R + Y A+F ++++AF +
Sbjct: 617 FERKE--YCSAVFLDISEAFDR 636
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 50.8 bits (116), Expect = 2e-06
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Frame = +2
Query: 257 KVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXX 433
+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 598 RVWHEGLLLKLAKI--LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLG 655
Query: 434 XXXXXXXXNDIP----WSP-PTH---LALFADTSTRRHDCLLFQ*KQVPNREEASERSLA 589
+D+P + P PT L+ +AD + +L N E +
Sbjct: 656 PILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILAT-AATRNNENYLK---T 711
Query: 590 LGQWFRKWRIDINPAKSTAVLFS 658
W KW I +N AK+ V+++
Sbjct: 712 FSDWADKWGISVNAAKTGHVIYT 734
Score = 43.6 bits (98), Expect = 3e-04
Identities = 27/82 (32%), Positives = 38/82 (46%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL K + QFGFR H QQ+ R+T+ IL
Sbjct: 519 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 578
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
R + Y A+F ++++AF +
Sbjct: 579 FERKE--YCSAVFLDISEAFDR 598
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.8 bits (116), Expect = 2e-06
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Frame = +2
Query: 257 KVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXX 433
+VWH GL+ KL + +P +L +I+ +L+NR+F + + G S + AGVPQG
Sbjct: 636 RVWHEGLLLKLAKI--LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLG 693
Query: 434 XXXXXXXXNDIP----WSP-PTH---LALFADTSTRRHDCLLFQ*KQVPNREEASERSLA 589
+D+P + P PT L+ +AD + +L N E +
Sbjct: 694 PILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILAT-AATRNNENYLK---T 749
Query: 590 LGQWFRKWRIDINPAKSTAVLFS 658
W KW I +N AK+ V+++
Sbjct: 750 FSDWADKWGISVNAAKTGHVIYT 772
Score = 43.6 bits (98), Expect = 3e-04
Identities = 27/82 (32%), Positives = 38/82 (46%)
Frame = +3
Query: 15 SYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVG 194
SYRPISLL K + QFGFR H QQ+ R+T+ IL
Sbjct: 557 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 616
Query: 195 LNRPKXLYTGALFFNVAKAFTK 260
R + Y A+F ++++AF +
Sbjct: 617 FERKE--YCSAVFLDISEAFDR 636
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 50.4 bits (115), Expect = 2e-06
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Frame = +2
Query: 257 KVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXX 436
+VW +GL+FK+ + +P + +++ +L N F R + + S + AGVPQG
Sbjct: 587 RVWLDGLLFKIIKL--LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGP 644
Query: 437 XXXXXXXNDIPWSPPTHLALFADTSTRRHDCLLFQ*KQVPNREEA--SERSLALGQWFRK 610
D P + FAD D + + P + A S ++ +W
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFAD------DTAILSRSKCPIKATALLSRHLTSVERWLAD 698
Query: 611 WRIDINPAKSTAVLFSDGK 667
WRI IN K V F+ K
Sbjct: 699 WRISINVQKCKQVTFTLNK 717
Score = 46.4 bits (105), Expect = 4e-05
Identities = 27/83 (32%), Positives = 38/83 (45%)
Frame = +3
Query: 12 TSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILV 191
+SYRPISLL + L QFGFR H ++QV+R+T I
Sbjct: 507 SSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRT 566
Query: 192 GLNRPKXLYTGALFFNVAKAFTK 260
+ Y A+F +VA+AF +
Sbjct: 567 AFEHRE--YCTAIFLDVAQAFDR 587
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 46.0 bits (104), Expect = 5e-05
Identities = 25/83 (30%), Positives = 41/83 (49%)
Frame = +2
Query: 257 KVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXX 436
+VW +GL+FK+ + +P ++ +++ +L R F R + SS + AGVPQG
Sbjct: 128 RVWLDGLMFKIIQL--LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGP 185
Query: 437 XXXXXXXNDIPWSPPTHLALFAD 505
DIP + + FAD
Sbjct: 186 ILYTLYTADIPTNYQLTIFTFAD 208
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 37.5 bits (83), Expect = 0.017
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +2
Query: 203 TKXVIHGSSL-LQRRKSVHKVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGT 379
TK +H S + L ++ +V + +I +L P ++ I++F+SNR RV
Sbjct: 564 TKSKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTGP-KIIKYIKNFMSNRKITVRVGPH 622
Query: 380 RSSPRPLTAGVPQG 421
SSP PL G+PQG
Sbjct: 623 TSSPLPLFNGIPQG 636
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 37.5 bits (83), Expect = 0.017
Identities = 30/123 (24%), Positives = 52/123 (42%)
Frame = +2
Query: 245 KSVHKVWHNGLIFKLFNMGAVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGX 424
++ +V + ++ +L G P L +I+ F++NRSFR R+ S+ L G+PQG
Sbjct: 587 RAFDRVGIHAVLCRLERWGIGP-RLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGS 645
Query: 425 XXXXXXXXXXXNDIPWSPPTHLALFADTSTRRHDCLLFQ*KQVPNREEASERSLALGQWF 604
DI H ++ S D ++F ++ N E+ L + Q
Sbjct: 646 PLSVVLFMIAIEDINDIVTRHKDIY--ISLYADDAIIF--TKIKNINTVREKFLEILQEI 701
Query: 605 RKW 613
W
Sbjct: 702 NSW 704
>BT011408-1|AAR96200.1| 1046|Drosophila melanogaster AT20689p
protein.
Length = 1046
Score = 29.1 bits (62), Expect = 6.1
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = -2
Query: 504 SANKAKWVGGDQGISLTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMM 325
S A+ + G + L LN+ +++ G V GEE S +R+ K R M
Sbjct: 543 STKDARLLPGSEPTPLIQALNQA--KSKSTGEAGVTPDGEEEDGSRMHRRSIAQKSQRRM 600
Query: 324 STRLSGTAP 298
R S T+P
Sbjct: 601 VRRSSSTSP 609
>AE014297-3677|AAN14027.1| 1193|Drosophila melanogaster CG6238-PB,
isoform B protein.
Length = 1193
Score = 29.1 bits (62), Expect = 6.1
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = -2
Query: 504 SANKAKWVGGDQGISLTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMM 325
S A+ + G + L LN+ +++ G V GEE S +R+ K R M
Sbjct: 543 STKDARLLPGSEPTPLIQALNQA--KSKSTGEAGVTPDGEEEDGSRMHRRSIAQKSQRRM 600
Query: 324 STRLSGTAP 298
R S T+P
Sbjct: 601 VRRSSSTSP 609
>AE014297-3676|AAF56372.3| 1192|Drosophila melanogaster CG6238-PA,
isoform A protein.
Length = 1192
Score = 29.1 bits (62), Expect = 6.1
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = -2
Query: 504 SANKAKWVGGDQGISLTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMM 325
S A+ + G + L LN+ +++ G V GEE S +R+ K R M
Sbjct: 542 STKDARLLPGSEPTPLIQALNQA--KSKSTGEAGVTPDGEEEDGSRMHRRSIAQKSQRRM 599
Query: 324 STRLSGTAP 298
R S T+P
Sbjct: 600 VRRSSSTSP 608
>AB036834-1|BAA89534.1| 1045|Drosophila melanogaster MAP kinase
phosphatase protein.
Length = 1045
Score = 29.1 bits (62), Expect = 6.1
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = -2
Query: 504 SANKAKWVGGDQGISLTNKLNRRGERTEPCGTPAVRGRGEERVPSTRYRKERFDKKSRMM 325
S A+ + G + L LN+ +++ G V GEE S +R+ K R M
Sbjct: 542 STKDARLLPGSEPTPLIQALNQA--KSKSTGEAGVTPDGEEEDGSRMHRRSIAQKSQRRM 599
Query: 324 STRLSGTAP 298
R S T+P
Sbjct: 600 VRRSSSTSP 608
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,380,602
Number of Sequences: 53049
Number of extensions: 698621
Number of successful extensions: 1981
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1955
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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